* more work on date time test cases
* fix date/time rendering test
* fix bug in code system handling (NPE) + add support for json test cas…
* extend policy advisor to control terminology validation + hack fixes
* fix up SHC parsing problem
* improvements to code system rendering + fix date/time rendering tests
***NO_CI***
* more work on date time test cases
* fix date/time rendering test
* fix bug in code system handling (NPE) + add support for json test cas…
* extend policy advisor to control terminology validation + hack fixes
* fix up SHC parsing problem
* improvements to code system rendering + fix date/time rendering tests
***NO_CI***
* Validation process now has the option to control level of validation on both references and contained resources,
through the addition of two new interfaces, this is reflected in the new fields I added in fire test cases
(see https://github.com/FHIR/fhir-test-cases/pull/101)
* Improve output for describeSize Utility unit tests.
* Fix logging of requests for dstu3
***NO_CI***
* wip
* first go at this, still some failing tests
* post-pairing with Grahame
* wip
* failing test cases
* fixed InstanceValidator to respect new validation options for both references and contained resources
* removed dead code
* put copyright back in BaseValidator
* wip
Validator:
* fix processing of modifier extensions and cross-version modifier extensions
Other changes:
* improvements to data types rendering based on new test cases (URLs, Money, Markdown)
* add locale to rendering context, and fix up timezone related rendering based on locale
***NO_CI***
Validator:
* Check for using CodeSystem not ValueSet in a value set binding
* remove verbose logging statements
Other code Changes:
* Render Expressions + supported profiles in CapabilityStatements
* Fix NPE rendering date with no value (only extension)
* Fix NPEs rendering code system properties
* Date tracking in new Terminology Cache
* Define Extensions for contained resources in IGs
***NO_CI***
Validator Changes
* Add warning about resources not linked to in bundles
* Fix up support for pre-adopting R5 extensions
Other Code Changes
* Updating client logger to log both req and resp
* Refactoring of converter loader and misc packages.
* rework all HTTP access through a single access point (todo: refactor this to use okhttp)
* Improvements to rendering for IG publication (including fixing broken links)
* fix NPE in QuestionnaireRenderer
* Move tx-cache management to tx.fhir.org instead of git
* fix concept map rendering
***NO_CI***
* Move loaders to own packages
* Move inner loader classes up one level
* Use lombok annotaions for BaseLoaderX classes
* Move ADLImporter
* Use lombok for ADLImporter inner classes
* Move inner ADLImporter classes up one level
* Move misc classes with inner classes to their own packages
* Encapsulate and add lombok to misc internal classes
* Move inner misc classes up one level
* Clean up explicit type arguments
* Revert back to master validator_test_case_version in pom.xml
* Update RELEASE_NOTES.md
Co-authored-by: David Otasek <david.otasek@Davids-MacBook-Pro.local>
Validator
* Fix validation of RiskAssessment probability
* Don't check MeasureReport groups if Measure doesn't have any groups
Other code changes
* Fix generation of GraphQL schema
* remove spurious log files
***NO_CI***
* https://github.com/hapifhir/org.hl7.fhir.core/issues/623
* add explicit control over the User-Agent header, and make sure header…
* #328 - wrong processing of markdown URLs
* test fixes for URL handling
* fix tests
* improved validation of UUIDs
***NO_CI***
* add explicit control over the User-Agent header, and make sure headers flow through properly to all calls
* #328 - wrong processing of markdown URLs
* test fixes for URL handling
* fix tests
* improved validation of UUIDs
* fix test case dependency
* Add Dicom Package builder
* NPE fixes
* Smart Health Cards support in validator
* Fix bug generating spreadsheets due to sheet name length limitations
* Implement descendent-of filter
* more NPE fixes
* add Element.removeChild
* fix issue generation snapshot and content reference, and work around …
* improve SHC validation error
* fix for NPE generating ConceptMap spreadsheet
* fix crash in IG publisher rendering illegal content
* Improve slicing error messages
* more improving error message resolving slicing
* add missing code + track prohibited / required elements (improve rend…
* fix for broken links in R4B IGs
* fix bug related to logger in FHIRToolingClient
* fix bug related to logger in context
* enable detection of whether tx server knows about value set and bette…
* make likely source URL visible outside ProfileUtilities
* fix renderers - don't make nonvalid URLs into html links + fix NPE +
* fix bug with sheetnames generating spreadsheets
* supper branches in current version of packages
* report slicing information automatically where slicing is based on pr…
* fix misleading validation message + add -ips parameter for validator
* hint not warning when it's an example questionnaire
***NO_CI***
* NPE fixes
* Smart Health Cards support in validator
* Fix bug generating spreadsheets due to sheet name length limitations
* Implement descendent-of filter
* more NPE fixes
* add Element.removeChild
* fix issue generation snapshot and content reference, and work around old erroneous binding description in R4
* improve SHC validation error
* fix for NPE generating ConceptMap spreadsheet
* fix crash in IG publisher rendering illegal content
* Improve slicing error messages
* more improving error message resolving slicing
* add missing code + track prohibited / required elements (improve rendering of IGs)
* fix for broken links in R4B IGs
* fix bug related to logger in FHIRToolingClient
* fix bug related to logger in context
* enable detection of whether tx server knows about value set and better track returned errors from tx server
* make likely source URL visible outside ProfileUtilities
* fix renderers - don't make nonvalid URLs into html links + fix NPE +
* fix bug with sheetnames generating spreadsheets
* supper branches in current version of packages
* report slicing information automatically where slicing is based on profile + fix shc support + support codesystem-properties-mode + fix value set validation on profiles + fix wrong entry point on vaildating contained resources with profiles
* fix misleading validation message + add -ips parameter for validator
* hint not warning when it's an example questionnaire
Validator
* fix NPE bug logging terminology server calls
* fix NPE bug validating logical models
* fix problem with Type Name when validating against Logical Models
***NO_CI***
Validator:
* Hack around erroneous R3 Invariant (ref-1)
* Add support for generating terminology spreadsheets from the command line validator
* Validate Resource.id and Element.id properly
Other Code Changes:
* Change the FHIRPath interface IEvaluationContext.resolveConstant to return List<Base> not Base (BREAKING CHANGE!)
* Binary Resource Renderer
* Spreadsheet Generation for terminology resources (org.hl7.fhir.r5.renderers.spreadsheets package)
* Fix various NPEs discovered by users
* Fix rendering of value sets that have no definition
* Mark generated narrative with a flag in user data
* return system for display when IWorkerContext.validateCode is called
***NO_CI***
* Differential element fields minValue/maxValue are now correctly treated in the snapshot generation process
* Conversion context added to conversions process
* Users can now define custom behavior for CodeSystems, Extensions, BundleEntries, and Types by extending BaseAdvisor.
* Resource Conversions are now thread-safe, each using their own instance of the conversion context that is unique
* ConversionFactory classes are statically accessed, to minimize changes downstream
* I need to add more tests, there were very few to begin with, and it's my next task
* All conversion libraries and no play makes Mark a dull boy
* Exposed showMessagesFromReferences on the command line interface to support reporting validation errors on referenced types (particularly useful when validating messages & documents)
* https://github.com/hapifhir/org.hl7.fhir.core/issues/564
* https://github.com/hapifhir/org.hl7.fhir.core/issues/513
***NO_CI***
* Conversion context added to conversions process
* Users can now define custom behavior for CodeSystems, Extensions, BundleEntries, and Types by extending BaseAdvisor.
* Resource Conversions are now thread-safe, each using their own instance of the conversion context that is unique
* ConversionFactory classes are statically accessed, to minimize changes downstream
* I need to add more tests, there were very few to begin with, and it's my next task
* All conversion libraries and no play makes Mark a dull boy
***NO_CI***
Fixed issue where validator fails to detect invariant issue when there are multiple profiles that use the same invariant on the same element. Also addressed issue revealed by the fix where the context resource wasn't being set properly when checking certain invariants (identified by one of the existing test cases).
***NO_CI***
* Fixed issue where validator fails to detect invariant issue when there are multiple profiles that use the same invariant on the same element. Also addressed issue revealed by the fix where the context resource wasn't being set properly when checking certain invariants (identified by one of the existing test cases).
* Moved notes from code into commit notes (this one) and added Release notes
Changed call to checkInvariants within checkChildByDefinition such that onlyNonInherited is now false because inherited invariants can be overridden and it's important to check both. Note that this means that onlyNonInherited doesn't seem to be used any more. @grahamegrieve - consider whether it should be removed.
Validator:
* Fix problem importing x-version extensions with multiple targets
* fix bug validating profiles on bundle.entry.resource
* Fix loading issues with German translations (Unicode encoding problem)
Version Conversion:
* Round trip old questionnaires properly with R5 (item.type)
Other code changes:
* Fix up questionnaire rendering for old versions
* Add support for using https:// references to HL7 website
* Add support for using https:// references to HL7 website
* Add support for R4B to context
* update pubpack to v0.0.9
***NO_CI***
Validator:
* Add support for $index on aggregators in FHIRPath
* don't fail with an exception if an unknown resource type appears in contained resource
* improved validation for some value sets that are based on unknown code systems
* add the -verbose parameter, and add additional verbose messages
* CDA: Fix erroneous type validation on CDA templates
Conversion code:
* Ignoring abatementBoolean when converting from dstu2 to r4
Snapshot generator:
* CDA: Suppress erroneous "Expansion" text appearing in view
* CDA: Don't delete binding information in snapshot for CDA bindable data types
Other code changes:
* Fix rendering of slices so type on slicer is not hidden
* Fix rendering for most resources - remove empty tables (e.g. text element, that shouldn't render)
* Fix NPE rendering code systems with some kinds of properties
* Improve rendering of questionnaires (icons, option sets)
* Rendering: add support for CodeableReference
* Rendering: Support binding mode and XML element information
***NO_CI***
* CDA: Suppress erroneous "Expansion" text appearing in view
* CDA: Don't delete binding information in snapshot for CDA bindable data types
* Rendering: add support for CodeableReference
* Rendering: Support binding mode and XML element information
Validator:
* Add NL translations
* Fix validation of extensions on patterns
* Validation of cardinality on address-line elements containing pattern elements fixed
* Ensure that validator creates errors on example urls by default
* Add -allow-example-urls option to the validator
* Fixed issue where when validating with no terminology server and a value set with only an expansion (no compose), the 'inferred' code system wasn't being populated and validation was then failing on a coding with no specified code system
* when validating value sets, use CodeSystem/$validate-code not ValueSet/$validate-code
Version Conversion Fixes:
* add copying of aggregation mode for conversion from 50 to 30
* add test for Observation conversion from 10 to 40
* add procedures conversion form dstu2 to r4
* add medication conversion from dstu2 to r4
* fix obscure issue converting discriminators from R2B to R4/5
Code Changes:
* Adding Maven exec to test validation cli jar
* Add SIDUtilities and clean up SID handling code across the code base
* fix rendering bug on references
***NO_CI***
Validator:
* Added parameter -want-invariants-in-messages
* fix issue with dependencies on IGs that have uppercase in package IDs
Other Code Changes
* Fix displays for some codes in ConceptMap.relationship when rendering
* Add Publication Version to rendering context for future use.
***NO_CI***
* Update core R5 code to v4.6.0 (breaking changes to questionnaire, concept map, and other resources that are less important to core)
* Fix compartment definitions of ListResource.source and subject for R3 and R4
* Snapshot generator: fix problem checking types on logical models
* Do not flag internal references as suspicious
* XMLParser allows passing a schema location
* XMLParser allows passing a schema location
* Issue 484 https://github.com/hapifhir/org.hl7.fhir.core/issues/484
* Adding Kotlin to the build process
* random cleaning up in convertors
* Adding version option to ignore bundle entry in conversion advisors
* Validator: Load code systems from known packages on the fly
* Validator: better handle invalid v3 dates
* Renderer: Render OperationDefinition.InputProfile and OutputProfile
* Important: Allow more valid schemas for Utilities.isAbsoluteUrl
* Validator: remove notes about extensible bindings if profile extensible binding is valid
***NO_CI***
Terminology: Ensure that CVX uses tx.fhir.org, not UTG definitions which are wrong
Validator: Fix problems with Bundle validation for ids in collections and add additional search related validation
Validator: Remove check on ElementDefinition.id for R2B
***NO_CI***
* Breaking Change: Fix issue where primitive elements with required bindings must have a value, but this wasn't be checked
* Fix bug with value set imports not working
* Fix bug with base definitions not working properly for logical models
* Better memory tracking for validator
* Get code generator compiling
***NO_CI***
* fix R2B for checking resource IDs
* Properly check code validity when an expansion is provided, but the code system is unknown
* fix problem with R2B StructureDefinition transform
* Improve validator performance
* Add support for forthcoming release
***NO_CI***
Version Conversion:
* add test for Observation conversion from 10 to 40
* add procedures conversion form dstu2 to r4
* add medication conversion from dstu2 to r4
* add copy of extension field for Enumeration fieldtype by Resource.copy
* add default value to Medication Request during conversion from dstu2 to r4
* fix R2B/R5 ElementDefinition.type.code conversion
Other:
* minor fixes in code generators for R4B
* Fix null pointer exception in validator validating language codes
* fix issue with validating fixed values for primitive elements
* add utility to unzip file
***NO_CI***
* Sessions are working,
* adding javadocs to cache
* These changes were already added, the merge re-added them to the RELEASE_NOTES by mistake.
* cleaning code a little
* add test for Observation conversion from 10 to 40
* add procedures conversion form dstu2 to r4
* add medication conversion from dstu2 to r4
***NO_CI***
Performance improvements in JSON metadata based parser
Add first round of supplement validation
improve error message on profile validation fail
fix NPE validating some slices
fix bug validating canonicals as part of choice data types
Adds special support for http://hl7.org/fhirpath/System.* types
fix bug matching slices in contained resources that have references to #
* fixes missing depencency:
Terminology server http://tx.fhir.orgException in thread "main" java.lang.NoClassDefFoundError: okhttp3/Request$Builder
* added optional tag to not break downstream projects (hapi)
Validation Changes:
* No change
Other code changes:
* update dependency on CQF framework
* Add primitive type factory
* minor changes to fix ContentReference issues
***NO_CI***
Validation Changes:
* No change
Other code changes:
* update dependency on CQF framework
* Add primitive type factory
* minor changes to fix ContentReference issues
***NO_CI***
Validator:
* More rules around URL validation, instead of just marking them as errors
* Don't report errors for extensible bindings when profiles apply required bindings
Other code changes:
* fix rendering issue with profile references
* only use c:\temp for logs if it's writeable
***NO_CI***
* Don't report errors for extensible bindings when profiles apply required bindings
* fix rendering issue with profile references
* only use c:\temp if it's writeable
Validator:
* allow for URLs that are references to ISO standards (urn:std:)
* fix up validation of value set for code system and expansions
* fix up validation for R2B issues (value set references, profiled types)
***NO_CI***
Validator:
* fix bad eror message in german messages (issue 399)
* better error messages when FHIRPath discriminators are invalid
* clean up error messages
Other code changes:
* remove unnecessary (& problem causing) Fragment-Host from OSGi manifest
* move structuremap utilities to a package
***NO_CI***
Validator:
* Fix NPE reading results of batch code validation
* Validate that binding references are present, and are for value sets
* Fix output message when there's nothing to validate
Other Code Changes:
* fix for renderer on ElementModels rendering - follow contentReference
* fix for NPE rendering references to contained value setes in Questionnaires that don't resolve
* fix for NPE rendering parameters with no names
* fix for rendering bundles on ElementModels
***NO_CI***
Validator:
* Fix support for cross version extensions across the entire valdation rule set
* Improve security warnings about rogue HTML tags
* fix error messages on unknown URLs (not longer say 'not done yet')
* fix validation of profiles and target profiles in all versions (before R3 different rules)
Other code changes:
* fix error message suppression on tooling client
* Track code systems used in the context
* improve error messages when rendering bundles that are documents that aren't properly formed
* Process Markdown when rendering CapabilityStatement.rest.documentation
* Fix rendering of CanonicalResource.url
Quality of Life Improvements:
* fixed deployment issue where validator.cli and report packages were sometimes published during deployment
***NO_CI***
Validator:
* Fix support for cross version extensions across the entire valdation rule set
* Improve security warnings about rogue HTML tags
* fix error messages on unknown URLs (not longer say 'not done yet')
* fix validation of profiles and target profiles in all versions (before R3 different rules)
Other code changes:
* fix error message suppression on tooling client
* Track code systems used in the context
* improve error messages when rendering bundles that are documents that aren't properly formed
* Process Markdown when rendering CapabilityStatement.rest.documentation
* Fix rendering of CanonicalResource.url
***NO_CI***
Validator:
* Add new validation to check these words in R3+: "Except for transactions and batches, each entry in a Bundle must have a fullUrl which is the identity of the resource in the entry"
Other code changes:
* Fix bug in package loader - allow loading version with later patch if old version is missing
***NO_CI***
* Removed logs from network calls
* Added back in help file display
* Avoiding checking ssl certs for build server, this needs to be fixed and should not be left in long term
***NO_CI***
Validator Changes:
* no effective changes
* fix issue for content references in versions before R3
* Add on the fly retrieval of profiles in the validator
* Fix bug where validator reported 'not done yet' for invalid contained references
* Fix for wrong reference to Any in cross version extensions
Other Code Changes:
* fix bug converting type mode in Structure Map
* fix bug converting Timing.when (issue 383)
* fix bug doing date time comparisons with seconds in FHIRPath
* Add support for instance-name and instance-description extensions
* Fix for bundle renderer trying to render resources from the wrong version
***NO_CI***
* Add on the fly retrieval of profiles in the validator, and fix bug where validator reported 'not done yet' for invalid contained references.
* fix loading issue for content references in versions before R3
* fix content resolution issue for versions from before 3
* Fix for bundle renderer trying to render resources from the wrong version
* Fix for wrong reference to Any in cross version extensions
* fix test case reference
* fix mistake generating snapshots around element ids
* fix tests
Validator Changes:
* no effective changes
Other Code Changes:
* fix bug converting type mode in Structure Map
* fix bug converting Timing.when (issue 383)
* fix bug doing date time comparisons with seconds in FHIRPath
* Add support for instance-name and instance-description extensions
***NO_CI***
* Fix for issue 373
* Fix for issue 381
* Fix for issue 204
* Internal tools now use OkHttp library for all resource fetching
* Added testing for network tools
***NO_CI***
* wip
* tests all pass with log outputs identical to original...is it better now? I don't know.
* proxy works, adding a test and docs next
* more cleanup and test fixes
* left in testing file
* didn't need that code anymore
Validator:
* Fix bug in unknown URL handling that could cause significant delays in validation (>1min / unknown URL)
* fix bug in processing excludes with filters in value sets
Other code changes:
* fix case problem with icons in questionnaire rendering
* fix problem with rendering nested slices on content references
* fix rendering on must-support view for must-support on types and target profiles
***NO_CI***
Validator:
* fix problem with min getting set to 1 on slices.
* fix problem with element definition resolution in profiles for contentReference
* don't apply warning about reference content when it's used as a pattern
Other code changes:
* fix problem with rendering unchanged terminology bindings in profiles
* fix problem rendering canonical URLs with | in them
* fix problem rendering multiple manifestations for an allergy reaction
* fix for NPE in version string comparison
* add styling when adding markdown to table
***NO_CI***
Validator changes:
* (none)
other code changes:
* fix bug when converting positiveInt between versions
* fix bug raising error when processing bundles
* don't use prism for big binaries when rendering library
* fix parameters renderer to create proper anchors
* Don't render id/base/other properties of Resource itself in auto-narrative generator
* fix bug where extension values not generated for simple extensions
* fix bug rendering content references in profiles
***NO_CI***
Validator Changes:
* Mark it has an error if a JSON Array is empty
* Don't make wrong error reports for profiling resources in bundles
* fix bug checking unfixed values for HumanName patterns
* fix bug checking patterns (missed in some circumstances)
* fix bug checking type of resources in bundles
* improve messages around cardinality errors in profiles
* add parameter -html-output for enhanced presentation of slicing information
Other code changes:
* Render binding description in profile tables if it doesn't contain paragraphs
* fix bug with wrong value for contentReference in derived profiles (profiles do not and cannot change the value)
***NO_CI***
* fix issue validating # references
* Mark it has an error if a JSON Array is empty
* Don't make wrong error reports for profiling resources in bundles
* * Render binding description in profile tables if it doesn't contain paragraphs
* fix bug with wrong value for contentReference in derived profiles (profiles do not and cannot change the value)
* fix bug with wrong value for contentReference in derived profiles (profiles do not and cannot change the value) (missed testing change)
* * fix bug not recognising some content as xml or json
* improved markdown support in table generator
* * fix bug checking unfixed values for HumanName patterns
* fix bug checking patterns (missed in some circumstances)
* fix bug checking type of resources in bundles
* improve messages around cardinality errors in profiles
* add parameter -html-output for enhanced presentation of slicing information (issue #283)
Validator:
* revise error message when can't connect to the terminology server
* enforce constraints in root slicing definitions as well as in the slices
* Improve messages when no terminology server (-tx n/a)
* Validate Profile on type in profile - must be for the right type
Other Changes:
* Add Search Parameter renderer
* Add text separator system on XhtmlNode
* check supportsCopyright in a JUnit test
* turn off snapshot consistency checking by default
***NO_CI***
Grahame Grieve
markiantorno
dotasek
rob-reynolds
Eric Lemieux
Tadgh
Lloyd McKenzie
Alexander Zautke
Pieter Edelman
jamesagnew
dependabot[bot]
Vadim Peretokin
Jonathan Percival
Patrick Werner
Oliver Egger
Kevin Dougan SmileCDR