5eca02f879
bug fixes
2023-03-06 23:33:38 +11:00
6559c4b245
improve SM validation message
2023-03-06 20:45:05 +11:00
507ff74c23
recognise R4B and R5 core packages
2023-03-06 20:44:41 +11:00
adafa7eec8
Improve Specification Difference Engine
2023-03-06 16:55:02 +11:00
36d22c522a
make xhtml nodes use less memory
2023-03-06 10:32:54 +11:00
356e500ab6
finish ConceptMap validation
2023-03-05 23:25:12 +11:00
ec72b1fcdd
fix parsing and validating of concept maps in structure maps + validate terminology part of structure maps
2023-03-05 18:29:11 +11:00
c42da7af68
more package hacking work
2023-03-05 06:14:22 +11:00
52c97f3c70
test primitive regexes if other tests pass
2023-03-05 06:14:07 +11:00
99d2421014
fix using wrong version of extensions package
2023-03-02 08:49:22 +11:00
31b770db8a
ping build
2023-03-02 07:36:10 +11:00
abba72d099
Fix bug in CommaSeparatedStringBuilder
2023-03-01 21:48:43 +11:00
4c30621491
structuremap validation and invariant fixes for forthcoming R5 release
2023-02-27 18:32:38 +11:00
2bd73c650e
Work on StructureMap validation
2023-02-27 07:30:04 +11:00
d3a407e369
FML validation
2023-02-25 14:05:03 +11:00
521e72a5ff
Merge pull request #1110 from balhoff/rdf-wg-r5-with-generated
...
Implement R5 RDF format changes
2023-02-24 10:21:19 +11:00
1eeee429ce
More markdown detection work
2023-02-21 16:52:32 +11:00
3eda8580fc
fix rendering for conditional references
2023-02-21 16:46:02 +11:00
76a3129b30
fix validation of conditional references
2023-02-20 23:48:16 +11:00
455d2774da
remove reference to package-client folder
2023-02-20 10:44:11 +11:00
38a55d261d
update table generator to suppress external links in base row and column
2023-02-18 15:13:13 +11:00
fecf024952
FHIR-40387 Improve guidance for markdown datatype
2023-02-16 13:03:37 +11:00
3011b37df4
fix bugs in XHTML parser (common entities)
2023-02-16 10:07:18 +11:00
c3580528bb
Fix Turtle syntax errors with multiline comments.
2023-02-15 09:58:25 -05:00
d1690a9416
Merge pull request #1101 from hapifhir/do-20230202-fix-jsonobject-instant-test
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Fix JsonObjectTests interaction with Instant
2023-02-15 08:31:58 +11:00
97772ada1e
Merge branch 'master' into rdf-wg-r5
2023-02-14 13:47:28 -05:00
33a84012f2
fix bug parsing html entities
2023-02-14 17:32:26 +11:00
d5d83bea9c
fix broken links in R5 builds
2023-02-14 09:53:22 +11:00
3a427385c5
FHIR QA driven changes
2023-02-12 17:53:41 +11:00
e6548bcccd
add unCamelCaseKeepCapitals
2023-02-09 17:39:47 +11:00
1d4f1e9d90
fix bug with duplicate value in getResourceNames()
2023-02-06 05:38:02 +11:00
7b3e206b1c
Fix JsonObjectTests interaction with Instant
2023-02-02 13:52:01 -05:00
5dc19cd052
Tweak spacing.
2023-02-01 11:55:11 -05:00
69ce2b45f2
Output lists in examples using RDF lists. Don’t output fhir:index.
2023-01-31 14:11:29 -05:00
08ed54fd35
Rework Package API to allow for authentication on package servers
2023-01-31 10:32:21 +11:00
4ab03c5c93
cater for "." in XML element and attribute names
2023-01-31 07:23:52 +11:00
cca38587ce
Cleanup jetbrains annotations ( #1090 )
...
Co-authored-by: dotasek <david.otasek@smilecdr.com>
2023-01-23 18:27:47 -05:00
b50aec5912
Advisory fix 1 ( #1089 )
...
* Update cache and comparison downloads to use https
* Zip Slip tests and fix
* Zip Slip tests 2 and fix
* Add missing tempDir child in ScannerTest
* Add win format zip test
* Add tests to r4b
* Add tests and fixes for slips in tgz processing
* Update fhir-test-cases version
2023-01-20 16:56:57 -05:00
f8e6371e1f
Merge branch 'master' into gg-202301-sm-errors
2023-01-20 19:44:24 +11:00
68b36d3cb5
go-publish related changes
2023-01-20 11:23:17 +11:00
f58b7acfb5
Swaps isBase64 with internal implementation for Android compatibility ( #1079 )
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* Adding animal sniffer to display all issues related to android compatibility.
* Duplicate isBase64 internally
Co-authored-by: Vitor Pamplona <vitor@vitorpamplona.com>
Co-authored-by: dotasek <david.otasek@smilecdr.com>
2023-01-18 18:40:24 -05:00
885e55352f
FTPClient: upload file path creation, logging, and improved default path ( #1078 )
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* More logging of errors.
* WIP create path for file to upload.
* WIP Tests
* More tests
* Improved logging and path fixes
* Clean up imports
* Rename test
* add testing code
Co-authored-by: dotasek <david.otasek@smilecdr.com>
Co-authored-by: Grahame Grieve <grahameg@gmail.ccom>
2023-01-18 12:42:59 -05:00
829cea8d33
Add check for slicing at the root of a profile
2023-01-17 11:41:42 +11:00
4b1a3dba46
Improve URN validation
2023-01-16 22:13:53 +11:00
a61d860ddb
FTP passive mode
2023-01-16 22:13:38 +11:00
615ed8d63f
Update R4 FHIRPath implementation from R5, and get all tests passing ( #1063 )
...
* Update R4 FHIRPath implementation from R5, and get all tests passing
* test NPE in markdown processing
* go-publish support
* Start implementing loading structure maps with validation
* release notes
* more work on FTP
* Fix breaking test.
* Add fhir-test-cases to r4 pom to fix breaking test
Co-authored-by: Grahame Grieve <grahameg@gmail.ccom>
Co-authored-by: dotasek <david.otasek@smilecdr.com>
2023-01-13 23:08:40 -05:00
dc9d5d0ed1
Set file transfers to binary type, ensure file contents match
2023-01-11 13:41:43 -05:00
edf6d75551
Implement FTP Client ( #1064 )
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* Start with tests against fake FTP
* Dummy test file
* Switch to our FTPClient, make tests break
* Implement FTPClient
* Rely on end caller to set path delimiters
* User port 8021 for tests (not protected in azure pipelines)
* Let mocks use Windows filesystem
* Gentle refactor
Co-authored-by: dotasek <david.otasek@smilecdr.com>
2023-01-09 20:06:21 -05:00
e794eca959
Changes to support upgrades to IG publisher -go-publish process
2023-01-05 08:44:45 +11:00
19f1171962
json date handling related changes
2023-01-05 08:43:57 +11:00
673e36b989
Merge branch 'master' into rdf-wg-r5-merging
2023-01-04 15:04:48 -05:00
db48892b66
fix failing test
2023-01-03 14:57:08 +11:00
f3fc19a906
refactor profile generation (utils -> renderer) + add new views
2023-01-03 14:54:11 +11:00
b894cc6da7
Merge pull request #1048 from qligier/pr-fix-text-appending
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Fix appending text in ProfileUtilities
2022-12-31 09:10:24 +11:00
858c06f097
Fix appending text in ProfileUtilities
...
If the base text was null, appending a text in the derived element (using "...") would show a "null" before the text. This commit adds the method Utilities.appendDerivedTextToBase() to implement to correct behavior.
2022-12-23 18:52:47 +01:00
37844bd395
update xver dependency
2022-12-17 08:07:43 +11:00
6b1ae35ef3
* Add validator support for fhir_comments in R2/R2B ( #1042 ) + Add validator checks around versions in extension URLs
2022-12-17 07:11:06 +11:00
8b7890bea2
removing caching package client - rests on invalid assumptions
2022-12-16 08:49:30 +11:00
9aeb39671b
fix to get tests passing again. If I'm lucky
2022-12-14 11:54:14 +11:00
72eae55218
fix new bug in package manager
2022-12-14 09:59:25 +11:00
e9d8400a78
fix package loading bug
2022-12-14 09:09:53 +11:00
d1d391496e
upgrade to new R5 release
2022-12-13 21:13:29 +11:00
f5d486f171
refactoring package-list.json handling
2022-12-12 19:54:37 +11:00
1786122763
Update org.hl7.fhir.utilities/src/main/resources/Messages.properties
...
Co-authored-by: Vadim Peretokin <vperetokin@hey.com>
2022-12-09 23:30:59 +11:00
ee8a58b7e1
Update org.hl7.fhir.utilities/src/main/resources/Messages.properties
...
Co-authored-by: Vadim Peretokin <vperetokin@hey.com>
2022-12-09 23:30:06 +11:00
7c2c44b333
Add Accept header fetching JSON
2022-12-09 20:09:12 +11:00
474f84c903
fix bug doing version comparison
2022-12-09 20:09:01 +11:00
771fb0ac00
Changes related to validation of document and message links
2022-12-09 11:09:17 +11:00
064c4ce896
Add contents to .index.json in package (per update to spec)
2022-12-06 16:21:56 +11:00
66f46bc319
remove test that shouldn't have been committed
2022-12-05 17:56:12 +11:00
b778641cf6
fix bug in XHTML generation
2022-12-05 17:27:52 +11:00
5d29a88552
fix npe appending slashes
2022-12-05 17:27:43 +11:00
a0c28f3326
Round trip XHTML faithfully wrt empty elements
2022-12-05 13:41:31 +11:00
cd8c970045
Add logging to package client
2022-12-01 16:56:55 +11:00
d24cc6c5ee
Merge remote-tracking branch 'origin/master'
2022-12-01 08:22:19 +11:00
fedfa88ffb
refactor resource reference resolution to use package dependencies whereever possible
2022-12-01 08:16:00 +11:00
d53aabe2e5
Do not delete previously undefined xmlns attributes when processing Xhtml nodes ( #985 )
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* Add tests
* Add back unseen namespace attributes
* Gentle refactor, document setOriginalNamespacePrefix
* Update validator_test_case_version
Co-authored-by: dotasek <david.otasek@smilecdr.com>
2022-11-30 16:01:28 -05:00
49f798de48
Consistency around rendering comments in examples in IGs
2022-11-26 22:24:17 -03:00
53fb08ab19
update JSON parser used by validator to JSON5 parser
2022-11-26 18:24:29 -03:00
363a95bb8a
more replacing json library
2022-11-25 22:37:43 -03:00
450fa1d02c
minor improvements to json library
2022-11-25 22:37:18 -03:00
61d998963a
fix debugging
2022-11-24 19:56:07 -03:00
618f98e323
Add spanish messages
2022-11-24 18:02:02 -03:00
1617315ed8
minor improvements to validator message
2022-11-24 17:58:15 -03:00
80f275ff18
upgrade to new JSON parser
2022-11-24 17:57:46 -03:00
b2e2c68f7e
minor typo fixes in validation messages
2022-11-22 12:45:33 -03:00
24331956f1
Add rule date to validation messages so new rules can be highlighted
2022-11-22 05:58:02 -03:00
8136b00c86
work on loading speed for validator
2022-11-21 18:46:47 -03:00
8e3833f58a
Fix broken LOINC link
2022-11-19 03:39:35 -03:00
28d107b4ae
Validate XHTML entities in XML
2022-11-17 15:21:17 -03:00
47443acaf3
prepare release
2022-11-16 18:36:02 -03:00
011e2488a3
New Json Parser
2022-11-16 15:11:33 -03:00
24656a20fa
typo fix in name
2022-11-15 18:13:45 +11:00
0f3e8be43b
Merge pull request #989 from vadi2/patch-1
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Fix missing space in slicing validation failure message
2022-11-15 17:49:32 +11:00
2de7220db4
Fix missing space in slicing validation failure message
2022-11-14 21:18:38 +01:00
cf7ef7218a
Merge pull request #979 from lmckenzi/NewIGHelp
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Change default help location for tables
2022-11-15 07:18:13 +11:00
231aae6043
Fix issue rendering resource by name
2022-11-14 18:04:27 +11:00
e01216b7f3
more xver package related changes
2022-11-11 12:29:45 +11:00
21b0577249
track hint about code validation
2022-11-10 05:16:10 +11:00
96218a5ce4
refactor resource narrative generation rules
2022-11-10 05:14:59 +11:00
a090055fd3
Merge branch 'master' into gg-202211-vs-errors
2022-11-08 09:47:07 +11:00
19e97c857b
Make references to canonical resources in error messages version specific
2022-11-08 09:37:26 +11:00
90f450ecb6
Rename method + remove dead code
2022-11-07 17:29:21 -05:00
11c369ea09
Remove all _PLURAL labels from constants
2022-11-07 16:52:47 -05:00
183f9ecfd2
Remove _PLURAL labels from keys
2022-11-07 16:39:40 -05:00
25c12a9e4e
Use plural phrase as placeholder for singular in de and nl
2022-11-07 15:20:31 -05:00
ffec2ce1c5
Merge remote-tracking branch 'origin/master' into do-i18n-plurals
2022-11-07 09:23:36 -05:00
90f3321c7d
Change default help location for tables
2022-11-05 17:07:38 -06:00
a6b167a94a
sync
2022-11-05 11:31:06 +11:00
fc7cd56335
Merge remote-tracking branch 'origin/master' into do-i18n-plurals
2022-11-03 13:35:40 -04:00
2519858dcd
update logical model snapshot generation and validation
2022-11-03 15:59:22 +11:00
16e21c5bbe
fix bug in simple http client when no accept header is set
2022-11-02 20:57:05 +11:00
aeeaf06d62
Fix de copy error
2022-11-01 18:07:28 -04:00
cc1f81bff4
New version of pubpack
2022-11-02 08:51:33 +11:00
bbf1a3af6f
MULTIPLE_LOGICAL_MODELS_PLURAL
2022-10-31 10:58:38 -04:00
56bc6bcf4c
FHIRPATH_FOCUS_PLURAL
2022-10-31 10:53:41 -04:00
0f8ac2958a
FHIRPATH_DISCRIMINATOR_MULTIPLE_PROFILES_PLURAL
2022-10-31 10:49:58 -04:00
c16b42d8da
FHIRPATH_DISCRIMINATOR_MULTIPLE_TYPES_PLURAL
2022-10-31 10:43:20 -04:00
789bd3f4ba
FHIRPATH_RESOLVE_DISCRIMINATOR_NO_TARGET_PLURAL
2022-10-31 10:42:19 -04:00
0f01b0b519
FHIRPATH_DISCRIMINATOR_RESOLVE_MULTIPLE_TYPES_PLURAL
2022-10-31 10:28:32 -04:00
2f5056c4ef
FHIRPATH_LEFT_VALUE_PLURAL + FHIRPATH_RIGHT_VALUE_PLURAL
2022-10-31 10:20:31 -04:00
269680608f
Merge master
2022-10-31 09:50:26 -04:00
5116536617
Finish CDS hooks extension validation
2022-10-29 19:18:19 +11:00
ddf769851b
improve error messages in json parser
2022-10-29 11:59:00 +11:00
27511f40dd
Add support for json-primitive-choice
2022-10-29 09:11:09 +11:00
59df630985
BUNDLE_BUNDLE_ENTRY_MULTIPLE_PROFILES_PLURAL
2022-10-28 16:57:44 -04:00
0b0cbab26d
XHTML_URL_INVALID_CHARS_PLURAL
2022-10-28 16:56:11 -04:00
25ef2dca4d
Merge remote-tracking branch 'origin/master' into do-i18n-plurals
2022-10-28 14:54:37 -04:00
2de6340cfa
Rename PL to Plural in method signatures
2022-10-28 14:44:09 -04:00
71a8c46c1d
Display_Name_for__should_be_one_of__instead_of_PLURAL
2022-10-28 13:16:00 -04:00
39dbf45a97
Discriminator__is_based_on_type_but_slice__in__has_multiple_types_PLURAL
2022-10-28 13:10:23 -04:00
f8a439f529
Profile_based_discriminators_must_have_only_one_type__in_profile_PLURAL
2022-10-28 13:09:27 -04:00
21c2f934b8
ould_not_match_discriminator_for_slice_in_profile_PLURAL_one
2022-10-28 12:14:57 -04:00
839fdc25e3
Reorg nl duplicate keys
2022-10-28 11:15:12 -04:00
404f4f712b
Validation_VAL_Profile_MultipleMatches_PLURAL
2022-10-28 10:40:13 -04:00
36df92c731
Validation_VAL_Profile_NoCheckMin_PLURAL
2022-10-28 10:34:23 -04:00
d67292676a
Validation_VAL_Profile_NoCheckMax_PLURAL
2022-10-28 10:29:27 -04:00
1bb3158444
Validation_VAL_Profile_Minimum/Maximum_PLURAL
2022-10-28 09:51:58 -04:00
f095b04bb1
Bundle_BUNDLE_Entry_Type3_PLURAL
2022-10-28 09:42:59 -04:00
a1a7e307ae
Questionnaire_QR_Item_OnlyOneA special case
2022-10-28 09:36:13 -04:00
83dfcd398c
Fix problem with determining implied code system
2022-10-28 09:09:48 +11:00
da14683990
Refactor, document
2022-10-27 17:52:38 -04:00
865f41b71f
Typo in test name
2022-10-27 17:37:34 -04:00
ef2092e500
Start implementing pluralization
2022-10-27 17:34:12 -04:00
9e4a19bb61
Improve germal pluralization test
2022-10-27 17:29:34 -04:00
cd5c9efcec
Add ICU4J dependency + initial tests
2022-10-27 16:02:44 -04:00
a1a27b359d
json fix
2022-10-27 07:39:30 +11:00
b187d289b6
fixes for plural messages for i18n
2022-10-26 14:30:25 +11:00
1c1138ec9b
improve error message for extensions without values
2022-10-25 14:58:38 +11:00
628ace4716
More control over copying files
2022-10-23 23:13:45 +11:00
41950eeb0a
Updates to validator for CDS Hooks support
2022-10-21 16:25:07 +11:00
c053f08a13
fix NPE building CCDA
2022-10-20 22:07:05 +11:00
4850a4c740
eliminate platform dependency in error message
2022-10-20 10:59:17 +11:00
108321e172
fix i18nconstants
2022-10-19 21:01:12 +11:00
574cd143ba
clarify resource id error + support type characteristics extension
2022-10-19 20:48:37 +11:00
f13dc58d8b
More work on language production
2022-10-19 20:47:18 +11:00
a6e31d36d3
value set validation version fixes, support for ActorDefinition, support for validating binaries by Logical Models, Language works starts,
2022-10-18 21:19:51 +11:00
9dd886ee2b
package fixes for r4/r4b package conversion
2022-10-13 06:49:08 +11:00
a15b57ef9a
Improved support for Logical Models (inc. cds-hooks)
2022-10-13 06:48:29 +11:00
3d83de32c6
fix problem with vocab test because of issue in package cache management
2022-10-12 10:22:05 +11:00
fb921f6f3f
Fix content reference generation
2022-10-10 20:45:46 +11:00
a66ca2a197
Add JSON enhancements for CDS hooks logical model
2022-10-10 17:05:12 +11:00
e1657c66b0
refactor IWorkerContext
2022-10-07 21:50:59 +11:00
c7ef0a3ac6
Add support for http://hl7.org/fhir/StructureDefinition/structuredefinition-dependencies to validator
2022-10-05 21:19:30 +11:00
86a3a56c42
better handling for sax errors and jvm issue
2022-10-04 16:55:17 +11:00
098b2895bc
Markdown changes for FHIR-38714 + fix up test framework for validator to use OperationOutcome
2022-10-04 14:06:30 +11:00
d71a5833c1
Gg 202210 shareables ( #936 )
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* Don't validate contained resources against Shareable* Profiles, + validate ShareableMeasure
* release notes
* fix compile problem
Co-authored-by: Grahame Grieve <grahameg@gmail.ccom>
2022-09-30 15:00:22 -04:00
eabf51938b
Remove CapabilityStatement2 from reported and checked resource names ( #935 )
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* Remove CapabilityStatement2 from reported and checked resource names
* Update RELEASE_NOTES.md
***NO_CI***
Co-authored-by: dotasek <david.otasek@smilecdr.com>
2022-09-30 13:10:51 -04:00
6ffb981156
Warn CLI users if file.encoding is not UTF-8 ( #933 )
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* Print warning for wrong file encoding
* Gentle refactor
Co-authored-by: dotasek <david.otasek@smilecdr.com>
2022-09-28 15:09:04 -04:00
a1d97b6ed4
fix test dependency
2022-09-27 08:46:49 -04:00
2285da5f8d
minor validation improvements
2022-09-26 23:49:32 -04:00
695a8610a2
fix error with code system validation messages
2022-09-23 09:33:25 -04:00
204157c1ec
update validator rules for supplements
2022-09-20 08:29:45 -04:00
72b3d2f6d1
escape bare html entities
2022-09-20 04:52:20 -04:00
689b9a57b1
check ShareableValueSet and shareableCodeSystem profiles for publishing resources
2022-09-20 04:52:01 -04:00
cfa5d39bdb
reorg extensions (clean up)
2022-09-20 04:51:00 -04:00
15361ad600
Provide backward compatibility for predicate methods.
2022-09-19 13:53:04 -04:00
5cf7e2c3bd
fix html parser for comments that end with --->
2022-09-17 09:51:59 -04:00
ccc38e48df
Fix NPE processing constraints without keys + fix for R5 terminology package problem
2022-09-16 23:49:26 -04:00
41d23ed56f
WIP outputting indexed objects as RDF collections.
2022-09-15 10:34:24 -04:00
43420db756
fix error with IG constraint
2022-09-15 09:00:51 +02:00
8ee2480f61
example generation improvements
2022-09-09 09:03:16 +10:00
ace807bca0
Add missing img.alt tags
2022-09-08 22:45:24 +10:00
4cbbce4ec8
img conformance in xhtml
2022-09-08 22:22:17 +10:00
6e80637185
Change message when extension is in modifierExtension field ( #917 )
...
Co-authored-by: dotasek <david.otasek@smilecdr.com>
2022-09-07 16:56:19 -04:00
6cf6d139c4
fix up for r5 tests
2022-09-07 08:12:20 +10:00
fa22d50297
utilities for OID rework in R5
2022-09-03 21:31:24 +10:00
f366962f51
Fix bindings constraint issue in validator
2022-09-03 07:37:38 +10:00
5fcc1866cd
better support for allowExamples
2022-08-26 21:00:50 +10:00
fba2145a9c
Fix bug where instance validator doesn't check type of sub-extensions, and check type characteristics
2022-08-23 22:32:40 +10:00
cd820bdf3f
Fix problem rendering ConceptMaps in value sets
2022-08-18 09:39:01 +10:00
6fb61b75f0
R5 related fixes
2022-08-12 21:24:14 +10:00
80ca7e31f9
Improvements to SearchParameterRenderer
2022-08-11 19:16:49 +10:00
e2d1cbfffa
msic commit
2022-08-09 20:19:39 +10:00
b43c210e1a
Rendering improvements for Documents
2022-07-28 21:30:59 +10:00
5c76af8dcd
fhirpath fixes
2022-07-27 22:39:05 +10:00
a82bbeb887
Merge pull request #873 from hapifhir/gg-202207-version-annotations
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fix up version annotations
2022-07-22 15:16:01 +10:00
5284773527
fix up version annotations
2022-07-22 14:27:26 +10:00
6f3c297c35
Fix dependency on resource more consistently ( #845 )
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Co-authored-by: dotasek <david.otasek@smilecdr.com>
2022-07-19 10:33:31 -04:00
5560093c02
Instantiate all ValidationMessage with this() instead of super() ( #853 )
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super() would call Object() instead of ValidationMessage(). This way, debugging can track instantiations of ValidationMessage from one place
Co-authored-by: dotasek <david.otasek@smilecdr.com>
2022-07-18 13:26:13 -04:00
Grahame Grieve
Grahame Grieve
Jim Balhoff
dotasek
dotasek
Quentin Ligier
Vadim Peretokin
Lloyd McKenzie