Commit Graph

2765 Commits

Author SHA1 Message Date
Grahame Grieve 3a6e6fe39a more xig related fixes 2023-09-08 13:03:51 +10:00
Grahame Grieve 493f2f51f2 more xig fixes 2023-09-08 12:15:52 +10:00
Grahame Grieve 71ff6a81db Another XIG fix 2023-09-08 10:22:13 +10:00
Grahame Grieve f67596f25b fix for npe in xig 2023-09-08 10:07:06 +10:00
Grahame Grieve 307623fd05 Fix failing tests due to jvm difference 2023-09-08 09:00:05 +10:00
Grahame Grieve 6b38a730e9 SHC signature verification 2023-09-08 07:35:11 +10:00
Grahame Grieve 4e92a7759a fix bug overwriting source package on canonical resources 2023-09-07 17:06:24 +10:00
Grahame Grieve c270f1761f Allow suppressing snapshot errors for XIG 2023-09-07 17:05:23 +10:00
markiantorno 980f04557c Updating version to: 6.1.4-SNAPSHOT and incrementing test cases dependency. 2023-09-06 08:22:50 +00:00
markiantorno 6d37127e63 Release: v6.1.3
## Validator Changes

* Test concept map code validity
* Rework type checking on target profiles to support imposesProfile
* Fix imposesProfile extension being missed on primary profile
* Add support for IPS-AU
* Fix warning/error message about experimental property on CodeSystems and ValueSets
* Fix unknown code message to include code system version
* Add provisional SHLinks validation

## Other code changes

* Render Requirements.reference
* Convert Requirements.reference between versions
* Fix test that breaks on local machines + Fix system path for FileSystemPackageCacheManager
* Update to cqframework 2.11 and remove unused common-beanutils declaration (#1419)
* Better xhtml logging for debugging
* Fix DF markdown engine to escape < properly
* Support for sub-packages in packagelist.json
* NPE proofing property handling for Code Systems
* rework the way intermediary content is handled in the validator
* Restore CodeQL regex queries (#1422) + Whitelist BSD 3-clause license
***NO_CI***
2023-09-06 06:12:07 +00:00
Grahame Grieve b980eeddf2 Render Requirements.reference 2023-09-06 09:51:09 +10:00
Grahame Grieve 87f7984f8b test concept map code validity 2023-09-06 09:12:25 +10:00
Grahame Grieve beb89b575a rework type checking on target profiles to support imposesProfile 2023-09-05 23:09:18 +10:00
Grahame Grieve 68b30fe819 fix unknown code message to include code system version 2023-09-04 13:39:45 +10:00
Grahame Grieve 808acb9d29 NPE proofing property handling for Code Systems 2023-09-04 13:38:37 +10:00
Grahame Grieve 5cc4e3ef03 rework the way intermediary content is handled in the validator + fix impose-profile handling for IPS-AU 2023-09-04 13:38:22 +10:00
Grahame Grieve be4957c9af fix typos 2023-09-02 23:35:00 +07:00
Grahame Grieve bfac7f06de Add SHLinks validation 2023-09-02 23:21:32 +07:00
markiantorno bca705a3c6 Updating version to: 6.1.3-SNAPSHOT and incrementing test cases dependency. 2023-08-31 13:58:37 +00:00
markiantorno f5e218c279 Release: v6.1.2
## Validator Changes

* FHIRPath fixes checking types discovered testing R6 build

## Other code changes

* Fix rendering of impose-profile extension
* Improvements to performance tracking code
* get FHIRFormat from SHC code
***NO_CI***
2023-08-31 13:29:31 +00:00
Grahame Grieve ab8f84f492
Merge pull request #1421 from hapifhir/2023-08-gg-fhirpath-validation-fixes
2023 08 gg fhirpath validation fixes
2023-08-31 14:23:53 +02:00
Grahame Grieve 3cd1119c2f fix wording mistake 2023-08-31 13:09:09 +02:00
Grahame Grieve 4bba1c2cde fix bugs in FHIRPath checking and track special time when validating resources 2023-08-31 06:30:29 +02:00
dotasek 8709e946d9 Get FhirFormat from shc code 2023-08-30 16:32:15 -04:00
Grahame Grieve 2deb88cdc9 Merge remote-tracking branch 'origin/master' 2023-08-30 09:38:45 +02:00
volodymyr-korzh 119bfcba4e
Fixed Out Of Memory issue during resource validation with local reference check enabled (#1413)
* Fixed Out Of Memory issue during resource validation with local reference check enabled

* Fixed Out Of Memory issue during resource validation with local reference check enabled - fix
2023-08-29 13:29:22 -04:00
Grahame Grieve a78aa25c14 #1415 review system.out.println() statements 2023-08-29 19:21:45 +02:00
Grahame Grieve ac33590b96 #1412 - fix out of memory issues 2023-08-29 17:34:03 +02:00
markiantorno 9048983155 Updating version to: 6.1.2-SNAPSHOT and incrementing test cases dependency. 2023-08-29 08:56:09 +00:00
markiantorno 2f6c61af78 Release: v6.1.1
## Validator Changes

* Fix problem validating code systems with content = not-present
* Further development of multi-language support on the tx server, and:
* Change the validator so that the default language is '*' (all languages) not 'en'

## Other code changes

* Improve license scanning and readme documentation
* Change xpp3 dependency
* Add client version to tx user-agent requests
* Suppress spurious xml parsing messages to System.err
***NO_CI***
2023-08-29 08:27:41 +00:00
Grahame Grieve 4201d51d63 Merge remote-tracking branch 'origin/master' 2023-08-29 09:18:56 +02:00
Grahame Grieve 51003669db no meld 2023-08-29 06:43:46 +02:00
Grahame Grieve f3112342d6 ping build 2023-08-28 21:06:28 +02:00
Grahame Grieve d0815682b8
Merge branch 'master' into language-rework 2023-08-28 20:13:42 +02:00
Grahame Grieve 4e43c425b1 syntax fixes 2023-08-28 17:30:06 +02:00
Grahame Grieve 47f5da6b3f fix failing test 2023-08-28 16:50:49 +02:00
Grahame Grieve a22338cd54 fix up failing tests 2023-08-28 15:58:37 +02:00
Grahame Grieve 9899906045 Suppress XML fatal errors to System.err 2023-08-28 12:57:01 +02:00
Grahame Grieve 684f6bd740 fix test cases 2023-08-28 12:56:47 +02:00
Grahame Grieve 84edac9abe Better cache control 2023-08-25 18:43:36 +02:00
Grahame Grieve 333ffc340e Accept-Language 2023-08-25 16:21:56 +02:00
Grahame Grieve 7eaa723ec9 rewrite the way language works in value sets 2023-08-25 13:09:36 +02:00
dotasek 985b66c276 Add version to agent header
+ remove unused getValidationEngine methods in Common
2023-08-24 15:31:09 -04:00
dotasek 490e57fa7c Swap out xpp3 dependency 2023-08-23 15:51:44 -04:00
markiantorno fb64a720c8 Updating version to: 6.1.1-SNAPSHOT and incrementing test cases dependency. 2023-08-22 17:26:57 +00:00
markiantorno e90863a271 Release: v6.1.0
## Validator Changes

* Performance fix: Delay loading content when loading IGs
* CodeSystem validation around count and content
* Add checking around internal status consistency and across dependencies (draft/experimental/retired/deprecated)
* Improved error messages on server failure
* Fix bug in warning about No valid Display Names found
* Use Supplements when validating display names
* Fix issue in FHIRPath .combine focus handling
* Check Extension fixed values for URLs - enforce consistency
* Fix R4 FML parser problem
* Track and report inactive status when reported from terminology server
* Add defense against large terminology operations causing obscure java errors
* Fix bug with client sending too much data to tx.fhir.org (big performance hit in some cases)
* Fix obscure bug with designations in a more specific language the the code system they are in

## Other code changes

* Significant upgrade of version comparison for profiles/extensions, value sets, and code systems, and integration into rendering framework
* Many minor changes to terminology functionality (reconciliation with differences with OntoServer) including service protection
  * Rename implySystem parameter to inferSystem per TI decision
  * rework how definitions are handled after discussion with Michael
  * add flat mode to tests for Ontoserver, and add experimental functionality
* fix rendering issue in subscription topic
* Add a renderer for ExampleScenario
* Automatically render markdown in code system concept definitions
* Fix loading issues in test mode for simplifier packages
* Remove spurious logging in FHIRPath engine
* Fix addChild error in PEBuilder (#1343) + Add test case
* CPT Importer
* Dependencies fixed/updated: okhttp, thymeleaf, commonmark & UCUM
* Xhtml fluent improvements + related XHtmlNode improvements
* Release new pubpack for new icons
* Json Object comparison: fix bug in arrays with multiple optional elements + improved error messages + support for external strings
* fix cross-version extensions web references where possible
* Don't suppress exceptions in terminology clients
* Add first cut of Profile Generation code
* Stop putting invalid codes in expansions if they are not in the code system
***NO_CI***
2023-08-22 17:01:34 +00:00
dotasek 1b33d2a537 Bump minor version 2023-08-22 11:56:22 -04:00
Grahame Grieve 54eb35fa1a fix bug with client sending too much data to tx.fhir.org 2023-08-22 21:47:02 +10:00
Grahame Grieve e11f03bd8a Fix erroneous handling of designations with a matching language to the base display 2023-08-22 12:08:53 +10:00
Grahame Grieve f795394fd2 Sorting ValueSet.expansion.contains in the tx tests 2023-08-21 19:35:10 +10:00