Commit Graph

829 Commits

Author SHA1 Message Date
markiantorno 344d778a87 Updating version to: 5.0.9-SNAPSHOT
***NO_CI***
2020-06-19 22:15:34 +00:00
markiantorno 87f1c42b89 Release: v5.0.8
***NO_CI***
2020-06-19 22:06:03 +00:00
Grahame Grieve 0e8b5f6552
various fixes for reported bugs (#252)
* fix bug in Definition mode - support ofType()

* fix bug reading old packages

* fix for invalid OperationOutome if nothing is wrong

* more fix for when no errors found
2020-06-19 16:02:56 -04:00
Mark Iantorno c1f5244873
Adding more verbose output for bad file path validator input (#249)
* Adding more verbose output for bad file path validator input

* Moving error output to i18n tooling. Adding tests to tooling, and addressing some issues with i18n implementation.

* Apparently the intended behavior is to not tell the user if they are localizing a string that doesn't exist.
2020-06-19 09:28:36 -04:00
Grahame Grieve e8c6a9112f fix bug parsing -profile parameter 2020-06-18 08:46:57 +10:00
Grahame Grieve c67c3c2892 fix missing translation routine 2020-06-17 12:22:17 +10:00
Grahame Grieve 779d50b61b Merge branch 'master' of https://github.com/hapifhir/org.hl7.fhir.core into gg-work 2020-06-14 07:07:42 +10:00
Grahame Grieve 3d481f1b05 Restore functionality of -sct parameter to validator 2020-06-14 07:07:18 +10:00
markiantorno 49c35b1de2 Updating version to: 5.0.8-SNAPSHOT
***NO_CI***
2020-06-13 13:12:37 +00:00
markiantorno b2ecaa2bfa Release: v5.0.7
* Override extension methods in BackboneElement to look in modifierExtensions as well as extensions
* First draft of Profile Comparison tools (org.hl7.fhir.r5.comparison)
* Improved error messages when snapshot generation fails when slicing something that doesn't repeat
* Improvements for CDA round-tripping (XML esacping issues, xsi:type related issues, namespacing issues)
* Fix bug rendering DiagnosticReports with multiple categories
* adjust check on Attachment to only be an warning (when no meaningful content exists)
* add security check mode to Validator
***NO_CI***
2020-06-13 12:51:27 +00:00
Mark Iantorno f5455bb9e9
Merge branch 'release' into merge_branch 2020-06-12 19:34:50 -04:00
Grahame Grieve 8604981d93 Merge branch 'master' of https://github.com/hapifhir/org.hl7.fhir.core into gg-work 2020-06-11 16:41:11 +10:00
Grahame Grieve 5f1d6e193c first release of functional Profile comparison on new framework 2020-06-11 16:40:57 +10:00
Mark Iantorno a88b79f41b
Fix for Azure pipelines being able to build and deploy core libraries properly.
* ...yup. it's really dumb

* wip

* wip

* Releases properly now on Azure.

* switching back to 5.0.7-SNAPSHOT version

* removing main method from Marker class
2020-06-10 18:25:23 -04:00
Grahame Grieve 4d9ace1619
Merge pull request #228 from ahdis/oliveregger_fml_xsitype
CDA xsi:type serialization when using fhir mapping language
2020-06-10 08:45:12 +10:00
Grahame Grieve 17fb1462c4 fix Attachment check, and add Validator Security checks 2020-06-09 17:19:06 +10:00
Oliver Egger e0d2b2a00d refactor to ValidationEngine/ElementModel 2020-06-08 10:01:08 +02:00
Grahame Grieve 94467b270a standardise terminology client across versions 2020-06-07 08:42:14 +10:00
Mark Iantorno 0fb57007c4
Release v5.0.6 (#226)
* reenable test and fix recursion

* remove disabled r4 fml tests

* add conformsTo test and support for FML

* Snapshot builder fix (#223)

* Update module-snapshot-publishing.yml for Azure Pipelines

* Changing pipeline, because intermodule depenedecies are not being read in correctly.

* Update README.md

* Fixed bad link

* Release: v5.0.6

***NO_CI***

* Updating version to: 5.0.7-SNAPSHOT
***NO_CI***

* Fixing issues and preparing for release (#225)

* Issue #189 - improve Questionnaire error message

* fix for issue #187

* more work on comparison

* Fix for NamingSystem display

Co-authored-by: Oliver Egger <oliver.egger@ahdis.ch>
Co-authored-by: Grahame Grieve <grahameg@gmail.com>
2020-06-05 18:47:17 -04:00
Grahame Grieve b2367e94b6 Merge branch 'master' of https://github.com/hapifhir/org.hl7.fhir.core into gg-work 2020-06-06 07:24:00 +10:00
Grahame Grieve b3c8cae61d Issue #189 - improve Questionnaire error message 2020-06-06 07:17:12 +10:00
Grahame Grieve eaab390aa4
Merge pull request #218 from ahdis/oliveregger_fml_conformsto
FHIR Mapping Language support for conformsTo function
2020-06-06 07:00:23 +10:00
Mark Iantorno 97b6a9fbdb
Snapshot builder fix (#223)
* Update module-snapshot-publishing.yml for Azure Pipelines

* Changing pipeline, because intermodule depenedecies are not being read in correctly.
2020-06-05 13:23:52 -04:00
Oliver Egger e6e4515777 add conformsTo test and support for FML 2020-06-05 17:56:14 +02:00
markiantorno 7975a65474 wip 2020-06-05 11:05:52 -04:00
Grahame Grieve b2f24f5031 fix up time tracking for validation testing 2020-06-05 08:07:23 +10:00
Grahame Grieve fcc18a0e39
Merge pull request #214 from hapifhir/ja_20200524_npm_rework
Refactor package support to remove filesystem dependency
2020-06-04 16:04:02 +10:00
markiantorno 33b47ac61c wip 2020-06-03 13:41:38 -04:00
markiantorno 7a63c0b353 wip 2020-06-03 13:33:12 -04:00
Grahame Grieve 861a0ee706 change error to warning for extension frrom different version because context might change between versions 2020-06-03 16:03:14 +10:00
jamesagnew 6534a5358b Merge branch 'master' into ja_20200524_npm_rework 2020-06-02 18:02:51 -04:00
Grahame Grieve a0245ca926 Release new version 5.0.6 2020-06-01 17:40:06 +10:00
Grahame Grieve 4df8b557c8
Merge pull request #199 from ahdis/oliveregger_validatortransformdifferential
add snapshot generation for the java validator -transform option
2020-06-01 17:03:38 +10:00
jamesagnew 17411a3659 Merge branch 'master' into ja_20200524_npm_rework 2020-05-30 12:07:17 -04:00
Grahame Grieve 05ac3ebc98 Release new version 5.0.5 2020-05-30 09:55:30 +10:00
Grahame Grieve a3d60843e4 fix path problem 2020-05-29 13:57:53 +10:00
jamesagnew 91e2d227fb Compile fixes 2020-05-28 21:07:18 -04:00
markiantorno a8176a841d Merge branch 'master' of https://github.com/hapifhir/org.hl7.fhir.core into junit_test_issues 2020-05-28 14:16:19 -04:00
markiantorno a8dcaca261 Adding conditional execution for new Narrative test, removing test suite, as we don't use those anymore, they are from JUnit 4 and cause the vintage engine to kick in, which double runs some tests. 2020-05-28 13:48:32 -04:00
Grahame Grieve f64d5c7fd5 fix problem with rendering confusion between paths around local and base specifications 2020-05-28 14:08:30 +10:00
jamesagnew c0f6366626 NPM rework 2020-05-27 05:27:44 -04:00
Grahame Grieve 998d1e0afc Release new version 5.0.4 2020-05-27 11:06:30 +10:00
Grahame Grieve c66bfec06b update dependency on pubpack 2020-05-27 09:28:55 +10:00
Grahame Grieve ccb6b067b3 Release new version 5.0.3 2020-05-26 06:15:36 +10:00
jamesagnew 444b612805 Start reworking NPM manager 2020-05-24 15:02:37 -04:00
Grahame Grieve 9d317fa9d7 start slow prep for batching terminology validation calls 2020-05-24 08:20:40 +10:00
Grahame Grieve 50ea83322f Release new version 5.0.2 2020-05-22 08:58:45 +10:00
Grahame Grieve 786aa001c5 fix misleading error message + uppate for new release of tests 2020-05-22 08:17:36 +10:00
jamesagnew 9c0a50a192 Avoid a crash when validating invalid base64, and reduce memory
footprint for large base64
2020-05-21 11:03:11 -04:00
Grahame Grieve 130caef348 Add support for Attachment validation + max size and max decimal places validation 2020-05-21 13:22:21 +10:00
jamesagnew ffafa55dc9 Validate quantity bindings 2020-05-20 17:15:16 -04:00
Grahame Grieve 31db4b7666 refactor rendering code 2020-05-18 20:30:05 +10:00
Grahame Grieve 47d8ba4558 Fix for not checking invariants on content references (e.g. ValueSet.compose.exclude) 2020-05-18 06:20:29 +10:00
Oliver Egger 57426b42a5 add snapshot gen 2020-05-16 00:46:25 +02:00
Grahame Grieve 14d0c126e1 Package validator 2020-05-13 19:51:32 +10:00
Grahame Grieve d5b5ca5798 Merge branch 'master' of https://github.com/hapifhir/org.hl7.fhir.core 2020-05-13 09:45:54 +10:00
Grahame Grieve d688f9254d * fix fatal NPE validating bundles when resource is missing
* fix tests for R5 changes
2020-05-13 09:45:29 +10:00
jamesagnew 2e5d9ff77c Version bump to 5.0.1 2020-05-12 19:27:30 -04:00
jamesagnew 60502b3c77 Prepare for 5.0.0 release 2020-05-12 11:33:54 -04:00
Grahame Grieve 463a557402 Release new version 4.2.30 2020-05-12 11:54:28 +10:00
Grahame Grieve fd09f8be93 allow mailto URLs for identifiers 2020-05-12 11:23:52 +10:00
Grahame Grieve 47e4673940 fix tests 2020-05-12 09:36:14 +10:00
Grahame Grieve edea997312 Clean up license 2020-05-12 08:55:27 +10:00
Grahame Grieve daa58aea8f Release new version 4.2.29 2020-05-11 17:25:24 +10:00
Grahame Grieve b43497897b upgrade to v4.4.0, with attendant fixes 2020-05-11 17:09:14 +10:00
Grahame Grieve 5f74bea327 move tests & do new release 2020-05-10 09:18:54 +10:00
Grahame Grieve 051f50824a Merge branch 'master' of https://github.com/hapifhir/org.hl7.fhir.core 2020-05-10 08:16:10 +10:00
Grahame Grieve d203b17c7d update to use new secondary package server 2020-05-10 08:15:40 +10:00
jamesagnew dda4bae0a9 Mark Javalin and SLF4j as optional dependencies 2020-05-09 14:20:40 -04:00
Grahame Grieve 0bf1dedf1e Release new version 4.2.27 2020-05-08 12:29:56 +10:00
Grahame Grieve 3afd2a9c32 Merge branch 'master' of https://github.com/hapifhir/org.hl7.fhir.core 2020-05-08 12:01:08 +10:00
Grahame Grieve 2af8d94081 new release 2020-05-08 12:00:51 +10:00
Grahame Grieve eb9de04d2d Start building conformance resource comparison code 2020-05-08 11:58:02 +10:00
markiantorno ef660d59db Merge branch 'master' of https://github.com/hapifhir/org.hl7.fhir.core into azure_pipelines_setup 2020-05-06 11:26:36 -04:00
Grahame Grieve c5c0a8db92 Release new version 4.2.26 2020-05-06 11:16:19 +10:00
Grahame Grieve 17ef340972 Release new version 4.2.25 2020-05-06 11:16:01 +10:00
Grahame Grieve 37d4994c8f start building the renderer package 2020-05-05 11:50:23 +10:00
markiantorno 7a8f84fc6c cleaning up port addresses for gui tests 2020-05-02 10:00:03 -04:00
Grahame Grieve 9017e7bf48 Release new version 4.2.25 2020-05-02 12:50:44 +10:00
Grahame Grieve 868fbb5f95 Release new version 4.2.25 2020-05-02 10:53:58 +10:00
Grahame Grieve b214e99930 Release new version 4.2.24 2020-05-02 06:57:31 +10:00
Grahame Grieve 60947cb7f4 Release new version 4.2.23 2020-05-01 11:40:38 +10:00
Grahame Grieve f8ca02d697 Release new version 4.2.23 2020-05-01 11:15:25 +10:00
markiantorno 89f98bb960 I cast you out unclean spirit. 2020-04-29 16:55:40 -04:00
markiantorno 368a45a150 Fix for HAPI-FHIR issue 1820 2020-04-29 14:08:36 -04:00
Grahame Grieve 6110b56396 Release new version 4.2.22 2020-04-29 20:37:31 +10:00
Grahame Grieve d63e05b3cb Fix problem evaluating "type" discriminators ending with .resolve() + fix NPE in FHIRPath parser 2020-04-29 20:34:18 +10:00
Grahame Grieve 608149e494 Release new version 4.2.21 2020-04-29 14:57:18 +10:00
Grahame Grieve 5d30dd61aa add icd-9-cm to list of known URIs 2020-04-29 14:51:27 +10:00
Grahame Grieve cd3e9b6034 Release new version 4.2.20 2020-04-28 13:45:51 +10:00
Grahame Grieve 353e520226 Release new version 4.2.20 2020-04-28 13:35:04 +10:00
Grahame Grieve 6f3362918d Release new version 4.2.20 2020-04-28 13:27:23 +10:00
Grahame Grieve d5fff86e8e get all tests passing. 2020-04-28 11:14:54 +10:00
Grahame Grieve c829de2f86
Merge branch 'master' into testing_updates 2020-04-24 07:20:35 +10:00
markiantorno 29d101fa09 wip 2020-04-23 17:02:54 -04:00
markiantorno 9c83540c2f Merge branch 'master' of https://github.com/hapifhir/org.hl7.fhir.core into validator_gui 2020-04-23 10:47:00 -04:00
Grahame Grieve 602e684bc6 Release new version 4.2.19 2020-04-23 21:07:04 +10:00
Grahame Grieve d94b39121f add check for code system content type when checking ll value sets value 2020-04-23 17:28:37 +10:00
Grahame Grieve 0be698af04 Merge branch 'master' of https://github.com/hapifhir/org.hl7.fhir.core 2020-04-23 05:48:57 +10:00
Grahame Grieve ec28c0e8ac fix failing test case 2020-04-23 05:48:34 +10:00
markiantorno f53bd707d8 Fix for array index out of bounds exception on adding profile for validation. 2020-04-22 10:02:56 -04:00
Grahame Grieve 50d7e0e879 Suppress errors associated with http://hl7.org/fhir/StructureDefinition/structuredefinition-normative-version in R4 2020-04-22 16:44:13 +10:00
Grahame Grieve bcde2d2f46 Add ability to turn caching off (for debugging) + add parameter for suppress extensible binding warnins 2020-04-22 16:42:44 +10:00
Grahame Grieve 175d5fa0b7 Release new version 4.2.18 2020-04-21 13:58:17 +10:00
Grahame Grieve 957a71dc41 better debugging of error strings 2020-04-21 13:57:41 +10:00
markiantorno bd17bc716b wip 2020-04-20 13:37:29 -04:00
markiantorno 46922bac09 forgot to remove the method 2020-04-17 20:49:27 -04:00
markiantorno 0db6635a75 deleting unused file 2020-04-17 20:18:42 -04:00
markiantorno 89250de244 Some cleanup and tests before first commit. 2020-04-17 20:17:12 -04:00
markiantorno 9a9de764b4 Boots on cli command now. 2020-04-17 16:02:58 -04:00
Grahame Grieve 87bcdd36c6 fix to compile 2020-04-17 22:28:19 +10:00
Grahame Grieve 8a9bcbf6e6 reorganise to test cross-version extensions 2020-04-17 22:27:02 +10:00
Grahame Grieve 4d30314a3d Improve URL validation + fix NPE in Measure validation 2020-04-17 10:58:06 +10:00
markiantorno d3733b3409 Merge branch 'master' of https://github.com/hapifhir/org.hl7.fhir.core into validator_gui 2020-04-16 20:28:25 -04:00
markiantorno 65b10fe994 Base functionality working 2020-04-16 17:06:19 -04:00
markiantorno 8c3e03399e wip 2020-04-16 10:17:33 -04:00
Grahame Grieve 979bad6af1 Add support for R5 version extensions and using cross version extensions when generating narrative 2020-04-12 22:04:57 +10:00
Grahame Grieve 4bd0d60e5c Release new version 4.2.17 2020-04-12 08:25:18 +10:00
Grahame Grieve d97e408d3c Release new version 4.2.16 2020-04-11 20:50:39 +10:00
Grahame Grieve c08bbc02e4 Improved rendering of filtered messages and group messages by type in qa.html 2020-04-11 19:29:52 +10:00
Grahame Grieve 16616df0bf
Merge pull request #168 from alexanderkiel/167-version-flag
Fix Broken Validator Version Flag
2020-04-09 10:54:20 +10:00
Grahame Grieve 01de20c310 Release new version 4.2.15 2020-04-09 10:50:54 +10:00
Grahame Grieve f1594bc133 beef up the Context interface to support package related tracking, and use that to manage UTG resource contention 2020-04-09 10:26:39 +10:00
Alexander Kiel 73294ee4fe Fix Broken Validator Version Flag
I'm not sure if that is the way the version detection though IG should work. But that is my take on it.
2020-04-07 16:21:03 +02:00
Grahame Grieve be5089a80c add case exception for populations 2020-04-07 14:50:40 +10:00
Grahame Grieve b179c482e7 complete CQL based Measure Validation 2020-04-07 07:27:59 +10:00
Grahame Grieve 5865f8da3e Release new version 4.2.14 2020-04-06 10:12:24 +10:00
Grahame Grieve 7400263b86 Change validator so root resource id is not in the same space as all other ids 2020-04-06 10:11:33 +10:00
Grahame Grieve a52a1127f8 Merge branch 'master' of https://github.com/hapifhir/org.hl7.fhir.core 2020-04-05 20:35:59 +10:00
Grahame Grieve 42461e6162 Add resource type to messages for clarity + fix typos in messages 2020-04-05 20:35:22 +10:00
Grahame Grieve c718a67396
Merge pull request #164 from hapifhir/cli_cleanup
Cli cleanup
2020-04-05 06:23:44 +10:00
Grahame Grieve 830afa4087
Merge pull request #163 from hapifhir/CQL_to_ELM
Adding dependencies for CQL-to-ELM libs.
2020-04-04 06:24:44 +11:00
markiantorno 7affad01fc Cleanup 2020-04-03 14:12:47 -04:00
markiantorno 0e45efb766 Cleaning up validator 2020-04-03 14:04:03 -04:00
markiantorno a31ce48e6e Merge branch 'master' of ssh://github.com/hapifhir/org.hl7.fhir.core into cli_cleanup 2020-04-03 09:36:37 -04:00
Grahame Grieve 03be5d65a8 debugging fix 2020-04-04 00:02:53 +11:00
markiantorno 85a2352fdf Adding dependencies for CQL-to-ELM libs. See https://github.com/cqframework/clinical_quality_language/blob/master/Src/java/cql-to-elm/OVERVIEW.md 2020-04-02 22:51:46 -04:00
markiantorno 6e9b760b75 wip 2020-04-02 22:46:49 -04:00
Grahame Grieve 101fbe3126 more work on Measure/MeasureReport validation 2020-04-03 12:16:33 +11:00
markiantorno b0a15a11a2 Cleaning up cli code 2020-04-02 11:40:44 -04:00
Grahame Grieve aef4404405 Release new version 4.2.13 2020-04-02 11:07:25 +11:00
Grahame Grieve ab581fdf86 further modularise validator and add Measure Validation 2020-04-02 11:05:55 +11:00
Grahame Grieve 9e59ce2323 Release new version 4.2.12 2020-03-31 11:21:06 +11:00
Grahame Grieve 232f1ff8ff Start building support for measure validation 2020-03-31 10:14:12 +11:00
Grahame Grieve 092a694a3f Release new version 4.2.11 2020-03-28 06:52:41 +11:00
Grahame Grieve 6baf62eca2 Release new version 4.2.12 2020-03-28 06:50:41 +11:00
Grahame Grieve 32b0563ea1 fox for "Any" in extension context (from R3) 2020-03-28 06:10:43 +11:00
Grahame Grieve 200f149222 Release new version 4.2.10 2020-03-26 08:29:01 +11:00
Grahame Grieve ac72dff882 More validation of URL charaters in XHTML ```a``` and ```img``` 2020-03-26 06:47:53 +11:00
jamesagnew 97ddf60066 Version bump 2020-03-17 07:55:15 -04:00