Commit Graph

1005 Commits

Author SHA1 Message Date
markiantorno 0e2ad40b05 Release: v5.6.63
## Validator Changes

* no changes

## Other code changes

* Fix NPE ValueSetRenderer
* More fixes in StructureDefinition validation type characteristic
* Fix typo in ImplementationGuideDefinitionParameterComponent `Value`
***NO_CI***
2022-09-12 16:09:27 +00:00
markiantorno 6169f92cb1 Updating version to: 5.6.63-SNAPSHOT and incrementing test cases dependency. 2022-09-10 06:33:43 +00:00
markiantorno 5286167c02 Release: v5.6.62
## Validator Changes

* More fixing for Type Characteristics

## Other code changes

* Fix rendering of concept map code references
* Fix version conversion problem for MessageHeader.event
***NO_CI***
2022-09-10 06:14:00 +00:00
markiantorno 31238146a0 Updating version to: 5.6.62-SNAPSHOT and incrementing test cases dependency. 2022-09-09 22:13:28 +00:00
markiantorno 9b9c12c97a Release: v5.6.61
## Validator Changes

* no changes

## Other code changes

* Improved HTML compliance (img.alt)
* Improved example generation
* Improved handling of illegal parameters in ImplementationGuideDefinition
***NO_CI***
2022-09-09 21:56:43 +00:00
markiantorno fadb727e87 Updating version to: 5.6.61-SNAPSHOT and incrementing test cases dependency. 2022-09-08 15:20:07 +00:00
markiantorno ca313fa6fe Release: v5.6.60
## Validator Changes

* no changes

## Other code changes

* Rendering improvements for Patient and extension summary
***NO_CI***
2022-09-08 15:03:24 +00:00
markiantorno 9f70b2b541 Updating version to: 5.6.60-SNAPSHOT and incrementing test cases dependency. 2022-09-07 13:29:55 +00:00
markiantorno df2e964389 Release: v5.6.59
## Validator Changes

* More fixes to type characteristics
* Validator would hang on some specific xml inputs - no more

## Other code changes

* General: This release contains java code for the as yet unreleased R5 ballot (it's a precondition for releasing it)
* Snapshot Generator handle bindings on CodeableReferences
* Renderer: Don't always render OperationDefinition header
***NO_CI***
2022-09-07 13:12:42 +00:00
Grahame Grieve 2b6c7aae39 more R5 fixes for IG publisher 2022-09-07 17:31:42 +10:00
markiantorno df2a768778 Updating version to: 5.6.59-SNAPSHOT and incrementing test cases dependency. 2022-09-04 00:09:47 +00:00
markiantorno 719f28dcd2 Release: v5.6.58
## Validator Changes

* Allow binding as a type characteristic for Extension

## Other code changes

* OID support refactoring
* Remove Contributor Datatype from R5
* R5 Build efficiency fixes
***NO_CI***
2022-09-03 23:48:53 +00:00
markiantorno 6f73511fe7 Updating version to: 5.6.58-SNAPSHOT and incrementing test cases dependency. 2022-09-01 13:44:59 +00:00
markiantorno 8a38b36855 Release: v5.6.57
## Validator Changes

* fix erroneous type characteristics error in StructureDefinition.differentials

## Other code changes

* ValuesetExpansion: Pay attention to inactive property, and activeOnly parameter
* fix broken paths rendering extensions
* Process markdown in code definitions when rendering ValueSets
* Fix duplicate ids in generated questionnaires
* Add types to wildcard list
***NO_CI***
2022-09-01 13:27:25 +00:00
markiantorno 4b8f8e3d2b Updating version to: 5.6.57-SNAPSHOT and incrementing test cases dependency. 2022-08-26 21:14:29 +00:00
markiantorno 51199251e8 Release: v5.6.56
## Validator Changes

* Improve support for example code systems in example mode

## Other code changes

* Render Comments as span titles in ProfileDrivenRenderer
* Fix type analysis in FHIRPath for abstract types
* Terminology utilitty improvements for fhir-types code system
* Lighten invariant background colour
* Fixes to DateTimeType for setFieldValue() method
***NO_CI***
2022-08-26 20:57:04 +00:00
Grahame Grieve ac9a1fc2c7
Merge pull request #903 from hapifhir/do-datetimetype-gregorian-zero
Fix DateTimeType inconsistencies when using field setting
2022-08-26 06:43:03 +10:00
markiantorno 540209b68f Updating version to: 5.6.56-SNAPSHOT and incrementing test cases dependency. 2022-08-25 17:05:11 +00:00
markiantorno 5112fe18ca Release: v5.6.55
## Validator Changes

* no changes

## Other code changes

* Return lists for FHIRPath constants in r4
* FHIR-25206 handle deprecated concepts properly when expanding value sets
* Fix SHEX generation issue
* Fix ConceptMap rendering column title
* Fix problem rendering ConceptMaps in value sets
* Fix NPE issue rendering resources without ids
* Improvements to SearchParameterRenderer
* Add Reference.resource to output of copy()
* Migration of r5 changes to r4b
* Bundle rendering improvements
* Fix loading canonical resources so that duplicates with different versions is OK
* Fix generation of profiles on Resource.id
***NO_CI***
2022-08-25 16:46:36 +00:00
dotasek e79b2bf199
Return lists for FHIRPath constants in r4 (#902)
* Test for r5

* Test for r4b

* r4 test + fix

Co-authored-by: dotasek <david.otasek@smilecdr.com>
2022-08-25 10:02:13 -04:00
dotasek f96b13e3b9 Repair r4
Why did that get undone?
2022-08-25 09:39:22 -04:00
dotasek e406fe3645 dstu2016may + dstu3 tests + fix 2022-08-25 09:18:45 -04:00
dotasek cc2ec05afe Improve test 2022-08-24 15:24:45 -04:00
dotasek 5b1ac27b12 Fix 2022-08-24 14:54:08 -04:00
dotasek f8d7aa755e Failing tests 2022-08-24 14:53:56 -04:00
jamesagnew 056e41d19d Add Reference.resource to output of copy(). 2022-08-09 11:23:23 -04:00
markiantorno 8051f476a9 Updating version to: 5.6.55-SNAPSHOT and incrementing test cases dependency. 2022-08-03 15:01:07 +00:00
markiantorno 24dbe8b984 Release: v5.6.54
## Validator Changes

* Fix for errors in FHIRPath evaluation (see https://chat.fhir.org/#narrow/stream/179266-fhirpath/topic/String.20functions)

## Other code changes

* R4B BackboneType fixes
* Add R4B to R5 interconversion code
* Improvements to Rendering Documents
* Add uuid to primitive types list
***NO_CI***
2022-08-03 14:28:56 +00:00
markiantorno 8978130451 Updating version to: 5.6.54-SNAPSHOT and incrementing test cases dependency. 2022-07-25 22:10:34 +00:00
markiantorno ec87c3a0b4 Release: v5.6.53
## Validator Changes

* Add support for OID 1.3.160 (very short OIDs are special)
* Fix evaluation of ValueSets that have only one value set import

## Other code changes

* Rework precision checking in datetime
* Update version conversion to not drop modifierExtensions
* Fix DocumentRendering to generate Composition Narrative if not present
* Restore Search Parameters (missing due to R5 draft generation issues)
* Don't access getBinaries directly in XVerExtensionManager

***NO_CI***
2022-07-25 21:49:05 +00:00
James Agnew f010804e44
Rework precision checking in datetime (#874) 2022-07-25 16:40:55 -04:00
markiantorno fa0597f864 Updating version to: 5.6.53-SNAPSHOT and incrementing test cases dependency. 2022-07-22 06:10:23 +00:00
markiantorno aa6094c451 Release: v5.6.52
## Validator Changes

* Fix issue with startsWith in FHIRPath engine
* Fix bugs validating references (some references not resolved)
* Fix minor issue supporting 4.3.0 (R4B)
* fix bug loading R5 extensions

## Other code changes

* Fix NPE rendering bundles
* R5 Changes to ConceptMap
* Fix bug rendering extensions
* Fix bug accessing polymorphic fields when rendering
* Fix bug around lazy loading packages when validating references
* Add ability to suppress serialising ids when serialising element models
***NO_CI***
2022-07-22 05:50:56 +00:00
dotasek 6f3c297c35
Fix dependency on resource more consistently (#845)
Co-authored-by: dotasek <david.otasek@smilecdr.com>
2022-07-19 10:33:31 -04:00
dotasek 14494d23b9
Use property to set apache poi version (#861)
Co-authored-by: dotasek <david.otasek@smilecdr.com>
2022-07-18 10:43:51 -04:00
markiantorno bb13edfdc0 Updating version to: 5.6.52-SNAPSHOT and incrementing test cases dependency. 2022-07-18 10:41:30 +00:00
markiantorno 078ca1e13a Release: v5.6.51
## Validator Changes

* no changes

## Other code changes

* Update R5 for revised ConceptMap in R5 cibuild, and release new core library for R5 build process
***NO_CI***
2022-07-18 10:23:13 +00:00
dependabot[bot] 0442043062
Bump poi from 4.0.1 to 4.1.1 in /org.hl7.fhir.r4
Bumps poi from 4.0.1 to 4.1.1.

---
updated-dependencies:
- dependency-name: org.apache.poi:poi
  dependency-type: direct:production
...

Signed-off-by: dependabot[bot] <support@github.com>
2022-06-29 17:09:52 +00:00
markiantorno 982ce5f58f Updating version to: 5.6.51-SNAPSHOT and incrementing test cases dependency. 2022-06-24 18:48:18 +00:00
markiantorno 4a654122fb Release: v5.6.50
## Validator Changes

* Improved logging when discriminator doesn't match doing slicing
* Use correct IPS branch when validating
* Load R5 extensions when validating (draft)
* Make it possible to run tests cases directly from validator (see command line help)

## Other code changes

* Regenerate R4B code for final R4B release
* Reduce text logging when running tests
* Minor test case fixes
* Fix fetching package by canonical to use pkgcanonical instead of canonical
* Fix broken link rendering code system references
* improvements to profile validation
***NO_CI***
2022-06-24 18:32:05 +00:00
dotasek ae8b21014a Bump version to 5.6.50-SNAPSHOT 2022-06-24 11:29:30 -04:00
markiantorno 891aaf4a20 Release: v5.6.49
## Validator Changes

* Improved logging when discriminator doesn't match doing slicing
* Use correct IPS branch when validating
* Load R5 extensions when validating (draft)
* Make it possible to run tests cases directly from validator (see command line help)

## Other code changes

* Regenerate R4B code for final R4B release
* Reduce text logging when running tests
* Minor test case fixes
* Fix fetching package by canonical to use pkgcanonical instead of canonical
* Fix broken link rendering code system references
* improvements to profile validation
***NO_CI***
2022-06-24 12:41:29 +00:00
dotasek 0ecba5bf2a Fix validation message for toCalendarZulu day validation 2022-06-20 09:26:11 -04:00
dotasek 1fee28fe84
Feature - run JUnit tests from validator_cli (#835)
* WIP add initial test running code

* Importing test modules fix breaking tests 1

* Clean up pom dependencies, move execution before context load

* Re-org and document cli pom

* Set more dependencies to compile. Print entries in classpath

* Try running via internal Executors

* Clearer class names + provide clear output

* Clean up test summarys and output + update class regex to junit default

* Refactor to avoid having to extend class

* Trim down dependency additions in pom + javadoc

* Add the rest of the modules to TestExecutor

* Parse additional params for classname filter and module

* Add experimental JUnit 4 runner in case JUnit 5 hates us.

* Include JUnit4 tests via adapters. Need to refactor for better naming.

* Update LoadIgTests to JUnit 5

* Gentle refactor, print execution time

* Remove unnecessary interface, organize packages

* Remove cached resources (need to fix this)

* Allow setting of txCache globally for tests + fix r5 tests

* Mild refactor of TestExecutor + Reorder test execution

* Add fhirTestCasesDirectory to testConfig + get r4 tests working

* Add dstu2016may and dstu3 tests

* Add dstu2 tests

* Add convertors tests

* Refactor resourceNameForFile + don't copy existing files

* Get all txCache directories centrally and allow all to live in same dir

* Start extracting txCache resources

* Finish extracting txCache resources

* Fix failing GraphQLEngineTest

* Try an mvn install for the pull pipeline

* Clean and refactor

* Test coverage

* Fix GraphQLEngineTests for local jar run

* More refactoring, more tests

* Add bare test for TxCacheResourceExtractor

Co-authored-by: dotasek <david.otasek@smilecdr.com>
2022-06-14 17:04:00 -04:00
Grahame Grieve 2783a5e3aa
Merge pull request #836 from hapifhir/gg-202206-r4b
R4b update
2022-06-14 13:26:51 +10:00
Grahame Grieve 62a082dbf3 Add value set expand by URL and use it in vsac 2022-06-13 21:50:11 +03:00
markiantorno 3484b891d5 Updating version to: 5.6.49-SNAPSHOT and incrementing test cases dependency. 2022-06-08 07:01:23 +00:00
markiantorno 17ce4678d4 Release: v5.6.48
## Validator Changes

* Clean up the -extension parameter - make implementation conistent with documentation
* Stop auto-converting parameters to strings for string functions e.g. .length() in the FHIRPath engine
* Add parameter -implicit-fhirpath-string-conversions for old FHIRPath string conversion functionality

## Other code changes

* Fix NPE counting descendents when validating
* Fix bug processing invalid HTTP response
***NO_CI***
2022-06-08 06:41:48 +00:00
markiantorno 2c8db93787 Updating version to: 5.6.48-SNAPSHOT and incrementing test cases dependency. 2022-05-27 17:24:16 +00:00
markiantorno 567a9b2ce7 Release: v5.6.47
## Validator Changes

* Significant improvement in performance of validation (10-100 fold for simple resources)
* Add output tracker to trask progress of validation (Validate %R against %P..........20..........40..........60..........80.........|)
* Alter per-1 to handle different precision on start/end
* Add support for a -jurisdiction parameter, preparing for jurisdictionally specific constraints in profiles
* Fix bug in snapshot generation where type slices on a mandatory element were all marked as mandatory
* Add warnings when potential matches are found when performing reference resolution in bundles

## Other code changes

* extend FHIRPath to support lowBoundary(), highBoundary() and precision()
* Fix for inefficiency in StructureMap engine
* Update version of PubPack used by the IGPublisher
* Handle scope on TestScript R4 <-> r5 conversion
* Fix bug converting extension context = Resource (R4 <-> R5 conversion)
* Update VSAC importer for changes to VSAC FHIR authorization
* Fix broken links in profile comparison due to cross version issues
***NO_CI***
2022-05-27 16:52:13 +00:00
Grahame Grieve 4cc0a8dfba Add support for 4.3.0 2022-05-27 22:17:32 +10:00
markiantorno 3ab828c381 Updating version to: 5.6.47-SNAPSHOT and incrementing test cases dependency. 2022-05-12 10:35:09 +00:00
markiantorno eca2fa5a5c Release: v5.6.46
## Validator Changes

* Trim unknown resource types when pre-adopting cross version extensions with type=Reference

## Other code changes

* Package Client: Get Packages by Dependency
* Snapshot Generator (R4b/R5): Fix generation of complex extension snapshot + improve rendering
* New tests for StructureMap execution
***NO_CI***
2022-05-12 10:18:11 +00:00
Grahame Grieve eddcaba803 get packages by dependency 2022-05-12 16:19:01 +10:00
markiantorno a4fd92633d Updating version to: 5.6.46-SNAPSHOT and incrementing test cases dependency. 2022-05-06 01:02:54 +00:00
markiantorno f2134e9643 Release: v5.6.45
## Validator Changes

* Support IGs #current where main instead of master

## Other code changes

* Add id to Profile CSVs
***NO_CI***
2022-05-06 00:29:32 +00:00
markiantorno 264e79bc24 Updating version to: 5.6.45-SNAPSHOT and incrementing test cases dependency. 2022-05-05 01:29:36 +00:00
markiantorno 5801daeb08 Release: v5.6.44
## Validator Changes

* Handle invalid HTTP responses better when accessing packages

## Other code changes

* Fix various rendering NPEs
***NO_CI***
2022-05-05 01:09:45 +00:00
markiantorno 6df50d482b Updating version to: 5.6.44-SNAPSHOT and incrementing test cases dependency. 2022-04-28 02:39:13 +00:00
markiantorno 3fffad10e3 Release: v5.6.43
## Validator Changes

* fix problem with non-new data types on xver extensions
* enable -extension parameter for validator

## Other code changes

* Fix bug when converting resolved clinical status for allergy intolerance
***NO_CI***
2022-04-28 02:20:19 +00:00
markiantorno 5fc2e9d6ec Updating version to: 5.6.43-SNAPSHOT and incrementing test cases dependency. 2022-04-23 14:25:48 +00:00
markiantorno 4f5aa8754c Release: v5.6.42
## Validator Changes

* Fix invalid FHIR version bug when loading IGs with explicit FHIR version

## Other code changes

* Fix reverse references in GraphQL searches
* Regenerate R4B code for candidate final release (not quite final yet)
* Various minor fixes for bugs found doing R4B finalization (wildcard types, version difference comparisons)
***NO_CI***
2022-04-23 14:06:50 +00:00
dotasek 1645982389
Fix for issues/766 - reverse references with _history in GraphQL (#790)
* Create and use getIdPart

* Add tests and changes for dstu3, r4, r4b, and r5

* Update get/set Id javadoc

Co-authored-by: dotasek <david.otasek@smilecdr.com>
2022-04-22 18:06:24 -04:00
Grahame Grieve fa92f85f3c Merge remote-tracking branch 'origin/master' 2022-04-22 07:36:53 +10:00
Grahame Grieve 10f2325e19 R4B quality fixes 2022-04-22 07:36:28 +10:00
Grahame Grieve c58516ce44 remove references to c:\temp 2022-04-20 09:59:30 +10:00
dotasek a7354f999e
Dotasek oe r4r5structuremapconversion (#775)
* Fix exception R5 to R4 of StructureMap #771

* Fix typo

* Enhance conversion from r5 to r4 + add failing test for r4 to r5

* WIP Convert R4 variable to R5 parameter and try to get correct dataType

* Clean up rough-work test

* Move static methods to FHIRPathConstant class

Co-authored-by: dotasek <david.otasek@smilecdr.com>
2022-04-13 18:22:58 -04:00
markiantorno 6328230f9f Updating version to: 5.6.42-SNAPSHOT and incrementing test cases dependency. 2022-04-12 04:03:54 +00:00
markiantorno 8785babf24 Release: v5.6.41
## Validator Changes

* Handle reslicing within the same profile
* Fix up wrong handling of context on exists() in FHIRPath
* Add hints to profiles around behavior of pattern on repeating elements
* Ignore all tooling extensions when validating
* support specifying an alternative version when loading source using -ig parameter
* Don't validate Bundle.entry.fullUrl as a reference to some other content

## Other code changes

* Improved output for unit test comparisons
* Fix conversion issues around Base64Binary
* Fix for R4/R5 DataRequirements conversion for DeviceUsage
* Add AdditionalBindings Rendering (draft)
* Display all designations when rendering ValueSets
* Fix bug where expansions have empty objects some times
* Fix R4B Snapshot generation
* Enable Linking to fragment CodeSystems
***NO_CI***
2022-04-12 03:31:27 +00:00
Grahame Grieve b9902833c5 Merge branch 'master' of https://github.com/hapifhir/org.hl7.fhir 2022-04-12 09:12:35 +10:00
Grahame Grieve 4927d23273 Add integrityt check utils for R4B integrity 2022-04-12 09:10:23 +10:00
dotasek a8da416ee3 Fix xml test + add unit tests 2022-04-11 14:57:10 -04:00
dotasek 2181cb14d5 Change tests to xml + fix breaking test 2022-04-11 14:10:53 -04:00
Grahame Grieve cdef76bc6d Fix bug where expansions have empty onbjects 2022-04-07 00:20:11 +10:00
markiantorno 87fed0cfc8 Updating version to: 5.6.41-SNAPSHOT and incrementing test cases dependency. 2022-03-30 23:21:31 +00:00
markiantorno f80a28816c Release: v5.6.40
## Validator Changes

* Add further clarification to Value set imports warning message

## Other code changes

* Consistent use of string values for primitive type conversions
* Fix problem with generated NPM Packages
* Fix URls when processing markdown while generating snapshots
* Default output to console, with additional output available via -debug option in CLI.
* Bump jackson-databind version to fix security vulnerability.
***NO_CI***
2022-03-30 23:05:39 +00:00
Grahame Grieve 4237554d2c Merge branch 'master' of https://github.com/hapifhir/org.hl7.fhir 2022-03-29 11:17:14 +11:00
Grahame Grieve 4735d99114 stability fixes 2022-03-29 11:17:01 +11:00
dotasek 6e45dd522e Merge remote-tracking branch 'origin/master' into dotasek-primitivetype-conversion-via-stringvalue 2022-03-18 14:09:12 -04:00
markiantorno b075c5695f Updating version to: 5.6.40-SNAPSHOT and incrementing test cases dependency. 2022-03-18 04:05:44 +00:00
markiantorno e053d5a260 Release: v5.6.39
## Validator Changes

* no changes
* Add messageid to OperationOutcome from Validation
* Add support for new rules around value set interpretation with multiple imported value sets (https://jira.hl7.org/browse/FHIR-25179)

## Other code changes

* Fix for FHIRPathEngine.funcReplaceMatches() incorrectly returning Boolean in DSTU2 & DSTU3
* Fix NPE Processing missing markdown in definitions when generating snapshots
* add support for .matchesFull() and fix .matches() in FHIRPath
* Fix core package identification when loading new R5 core packages
***NO_CI***
2022-03-18 03:46:59 +00:00
dotasek d0feacaaa8 Add tests and changes for Decimal 2022-03-17 15:41:07 -04:00
dotasek b5b43836eb Add tests and changes for Base64Binary 2022-03-16 12:20:58 -04:00
dotasek 9903d15ecc Add tests for setValueAsString and contructor precision checking 2022-03-15 17:47:23 -04:00
dotasek 1a7e076479 Move precision checking code to setValueAsString 2022-03-15 16:49:51 -04:00
markiantorno 8f5db15937 Updating version to: 5.6.39-SNAPSHOT and incrementing test cases dependency. 2022-03-14 21:48:39 +00:00
markiantorno 9ad69aca53 Release: v5.6.38
## Validator Changes

* no changes

## Other code changes

* Fix for FHIRPathEngine.funcReplaceMatches() incorrectly returning Boolean in DSTU2 & DSTU3
***NO_CI***
2022-03-14 21:32:32 +00:00
markiantorno e4ce145a0b Updating version to: 5.6.38-SNAPSHOT and incrementing test cases dependency. 2022-03-11 03:21:07 +00:00
markiantorno e86c9afc7a Release: v5.6.37
## Validator Changes

* fix handling of xver extensions with choice sub-extensions
* validate consistency of extension modifier flag with extension use in a profile

## Other code changes

* more presenting extensions when rendering.
* Get package id from 'package' field when 'npm-package' unavailable
* Ignore META-INF contents from other dependencies while building Validator jar
* Fix to r5 TestingUtilities to allow NarrativeGenerationTests to pass.
* fix handling to xver extensions generating snapshots
***NO_CI***
2022-03-11 03:04:43 +00:00
markiantorno 4909286a4b Updating version to: 5.6.37-SNAPSHOT and incrementing test cases dependency. 2022-02-26 05:00:46 +00:00
markiantorno 17bf21ecf8 Release: v5.6.36
## Validator Changes

* No changes

## Other code changes

* fix expansions where inactive = false (was wrongly including inactive codes)
***NO_CI***
2022-02-26 04:42:17 +00:00
dotasek 5cc8dd7974 Fix incorrect fromCode for R4/DSTU2 2022-02-23 19:02:45 -05:00
markiantorno 9e693b6a03 Updating version to: 5.6.36-SNAPSHOT and incrementing test cases dependency. 2022-02-19 22:00:05 +00:00
markiantorno 685ea98d37 Release: v5.6.35
## Validator Changes

* no changes

## Other code changes

* fix various rendering issues from core spec
***NO_CI***
2022-02-19 21:28:34 +00:00
markiantorno 73baca035e Updating version to: 5.6.35-SNAPSHOT and incrementing test cases dependency. 2022-02-16 05:52:52 +00:00
markiantorno edd2c43e64 Release: v5.6.34
## Validator Changes

* Improve code validation error when value set can't be supported on tx.fhir.org
* Hide error about regex in core package

## Other code changes

* Fix wrong URL links in processed markdown
* Don't let txCache errors stop the process
* Fix broken links in questionnaire +
***NO_CI***
2022-02-16 05:32:34 +00:00
markiantorno 1d02e04edd Updating version to: 5.6.34-SNAPSHOT and incrementing test cases dependency. 2022-02-15 11:21:29 +00:00
markiantorno cf7415b33e Release: v5.6.33
## Validator Changes

* no changes

## Other code changes

* Fix error access experimental on canonical
***NO_CI***
2022-02-15 11:00:55 +00:00
markiantorno e1613a7087 Updating version to: 5.6.33-SNAPSHOT and incrementing test cases dependency. 2022-02-14 06:57:10 +00:00
markiantorno 4a8aeda4e9 Release: v5.6.32
## Validator Changes

* no changes

## Other code changes

* Fix NPE error in Patient renderer
***NO_CI***
2022-02-14 06:25:49 +00:00
markiantorno 4ab3fea400 Updating version to: 5.6.32-SNAPSHOT and incrementing test cases dependency. 2022-02-14 01:27:51 +00:00
markiantorno 04bb17783e Release: v5.6.31
## Validator Changes

* accept regex on ElementDefinition and ElementDefinition.type, and an error for regex on ElementDefintion.type (though core packages have it on the wrong place)
* fix handling of cross-version extensions on choice elements
* fix OID validation (accept 1.3.88 GTIN OID)
* only consider bindable types when checking for multi-type bindings

## Other code changes

* Fix definitions in ListResource ("List" not "ListResource")
* introduce fhir-tools-settings.conf (see https://confluence.hl7.org/display/FHIR/Using+fhir-tool-settings.conf)
* Rendering fixes & improvements for Questionnaire and Patient and partial dates
* improvements to relative link handling in markdown when generating snapshots
* updates to package tools for changes to package.json#type (see https://confluence.hl7.org/pages/viewpage.action?pageId=35718629#NPMPackageSpecification-Packagemanifest)
* fix semver handling for tags in versions
* Bump mockito and bytebuddy versions for Java 17 compatibility & fix Kotlin ref
***NO_CI***
2022-02-14 01:08:37 +00:00
Grahame Grieve 6310b1158e #722 fix ListResource name misuse 2022-02-13 08:29:01 +11:00
Grahame Grieve a570ef08a6 Merge branch 'master' of https://github.com/hapifhir/org.hl7.fhir 2022-02-12 08:37:02 +11:00
Grahame Grieve b49e791cd1 Updates for changes to package.json type 2022-02-11 09:36:47 +11:00
dotasek f6d3139461 Clean up duplicate entries for httpclient in pom.xml 2022-02-10 13:44:54 -05:00
markiantorno 045299ae7a Updating version to: 5.6.31-SNAPSHOT and incrementing test cases dependency. 2022-02-07 15:56:51 +00:00
markiantorno 7ee476a9b6 Release: v5.6.30
## Validator Changes

* no changes

## Other code changes

* Use builders for SimpleWorkerContext and ValidationEngine to enforce initialization order for caches and capabilities
***NO_CI***
2022-02-07 15:07:54 +00:00
dotasek 0e3e410ea1 Merge branch 'master' into simpleworkercontextbuilder 2022-02-04 09:50:42 -05:00
markiantorno 703f907289 Updating version to: 5.6.30-SNAPSHOT and incrementing test cases dependency. 2022-02-03 23:15:06 +00:00
markiantorno 9a89045bac Release: v5.6.29
## Validator Changes

* no changes

## Other code changes

* Fix package location for CacheVerificationLogger
***NO_CI***
2022-02-03 22:42:27 +00:00
dotasek 847ede5f88 Refactor SimpleWorkerContext and ValidationEngine 2022-02-01 15:28:19 -05:00
markiantorno c41fcf9fa9 Updating version to: 5.6.29-SNAPSHOT and incrementing test cases dependency. 2022-02-01 02:57:54 +00:00
markiantorno fe073b6a8a Release: v5.6.28
## Validator Changes

* no changes
* Add ability to [compile a map file to a StructureDefinition](https://confluence.hl7.org/display/FHIR/Using+the+FHIR+Mapping+Language#UsingtheFHIRMappingLanguage-runtransformsjavavalidator)
* Add knowledge of additional R5 extensions for StructureDefinitions
* Fix problem validating extension context on choice types
* Add hint when binding found on element with multiple types
* Fix validator to guess system on all uses of code (not just most)

## Other code changes

* Use cached terminology server responses for unit and integration tests.
* Add more HTTP logging
* Clean up various issues with graphQL and polymorphic elements
* Add better support for date/time rendering
* Significant speed improvement for terminology caching
***NO_CI***
2022-02-01 02:36:54 +00:00
Grahame Grieve cae92c8621
Merge pull request #727 from hapifhir/ja_20220130_graphql_cleanup
Updates to GraphQL
2022-02-01 11:49:10 +11:00
jamesagnew 846866472b Updates to GraphQL 2022-01-30 17:04:10 -05:00
dotasek 39e30a10c4 Clean up comments 2022-01-26 09:28:19 -05:00
dotasek 09ddd964ff Merge remote-tracking branch 'origin/master' into tx-server-cache-analysis 2022-01-21 17:39:51 -05:00
markiantorno f69a30421f Updating version to: 5.6.28-SNAPSHOT and incrementing test cases dependency. 2022-01-21 21:43:26 +00:00
markiantorno 90008b7744 Release: v5.6.27
## Validator Changes

* no changes

## Other code changes

* Fix unnecessary JsonParser/XmlParser class load
***NO_CI***
2022-01-21 21:12:00 +00:00
markiantorno 8818acfbf8 Updating version to: 5.6.27-SNAPSHOT and incrementing test cases dependency. 2022-01-21 16:20:40 +00:00
markiantorno b82cc42663 Release: v5.6.26
## Validator Changes

* no changes

## Other code changes

* Avoid unnecessary JsonParser/XmlParser class load
***NO_CI***
2022-01-21 16:02:59 +00:00
dotasek 4826424499 Make additional caches to cover NativeHostService and ValidationService 2022-01-19 18:36:39 -05:00
dotasek 0a3e9d3f31 Merge branch 'master' into tx-server-cache-analysis 2022-01-18 16:10:21 -05:00
dotasek d9d0f22ff3 cache CapabilityStatement and TerminologyCapabilities 2022-01-18 16:09:59 -05:00
markiantorno 15fcc4607e Updating version to: 5.6.26-SNAPSHOT and incrementing test cases dependency. 2022-01-17 22:42:22 +00:00
markiantorno 4b808f140c Release: v5.6.25
## Validator Changes

* no changes

## Other code changes

* fix bug where generated packages have files in the wrong places
* fix inclusion of Java constants in CLI help text.
* fix bug on `-compile` output when using 'current' version.
***NO_CI***
2022-01-17 22:24:48 +00:00
markiantorno 7823945213 Updating version to: 5.6.25-SNAPSHOT and incrementing test cases dependency. 2022-01-17 11:31:30 +00:00
markiantorno c2bcb08855 Release: v5.6.24
## Validator Changes

* No changes to the validator

## Other code changes

* Improved rendering for value sets
***NO_CI***
2022-01-17 11:13:36 +00:00
markiantorno f368b021e3 Updating version to: 5.6.24-SNAPSHOT and incrementing test cases dependency. 2022-01-14 04:30:14 +00:00
markiantorno a536ceba7f Release: v5.6.23
## Validator
* changes to profile comparison based on discussion at Jan 2022 connectathon
* fix FHIRPath handling for incomplete FHIRPath expressions

## Other code changes
* fix markdown related dependencies
* fix NPE in Utilities.pathURL()
* fix logging problem in tx server logging
* fix problem caching value sets during validation
* fix NPE setting locale based on canonical jurisdiction
* Improve rendering for Quantity/Range + return display when validating for rendering purposes

***NO_CI***
2022-01-14 03:58:44 +00:00
Grahame Grieve 5313706a9a fix compile problems 2022-01-14 06:24:46 +11:00
dotasek 6e0b14b0b6 Merge branch 'master' into tx-server-cache-analysis 2022-01-13 09:46:45 -05:00
Grahame Grieve 554a458b57 fix up logging problem 2022-01-13 17:38:39 +11:00
markiantorno b08691b425 Updating version to: 5.6.23-SNAPSHOT and incrementing test cases dependency. 2022-01-11 00:07:58 +00:00
markiantorno 8a933094b1 Release: v5.6.22
* fix bug for NullPointerException in Bundle convertors when resource is not available.
* fix Java locale backward compatibility in surefire
***NO_CI***
2022-01-10 23:53:00 +00:00
dotasek 32bbcf14b6 Merge remote-tracking branch 'origin/master' into tx-server-cache-analysis 2022-01-06 11:43:10 -05:00
dotasek 83679d758c
Merge pull request #699 from paul-robson-validic/bug_check_loop_variable
Bug: Loop condition is always true
2022-01-06 11:24:14 -05:00
dotasek 36cc6defc2 Refactor with a mock + new test to catch exception 2022-01-06 10:10:45 -05:00
dotasek 2d4bbe3749 Clean code 2022-01-04 13:57:39 -05:00
dotasek 7ee5d0c5e4 Merge remote-tracking branch 'origin/master' into tx-server-cache-analysis 2022-01-04 13:23:32 -05:00
markiantorno 13bc0d73ca Updating version to: 5.6.22-SNAPSHOT and incrementing test cases dependency. 2021-12-28 17:45:19 +00:00
markiantorno 0394b96b14 Release: v5.6.21
* Restored missing search parameter constants for R5 model classes
***NO_CI***
2021-12-28 17:28:47 +00:00
markiantorno 4a8d66bd89 Updating version to: 5.6.21-SNAPSHOT and incrementing test cases dependency. 2021-12-23 00:04:24 +00:00
markiantorno 3523d38052 Release: v5.6.20
## Validator Changes

* fix bug looking for contained resources inside bundles when validating resources using conformsTo()
* fix problems validating canonical reference profile types

## Other code changes

n/a
***NO_CI***
2021-12-22 23:46:57 +00:00
markiantorno 2d2000b009 Updating version to: 5.6.20-SNAPSHOT and incrementing test cases dependency. 2021-12-22 20:12:54 +00:00
markiantorno 6bfb964c28 Release: v5.6.19
## Validator Changes:

* ignore canonical resources found in core examples packages
* get .ofType() working in discriminators (round #1!)
* fix bug checking enableWhen - ignoring items in answers
* Improved Error messages validating bundle entries

## Other Code Changes

* Improve rendering of uris that point to known resources
* Fix wrong reference rendering questionnaire
* Fix rendering of QuestionnaireResponses - render items in answers properly
* Improve Error message when snapshot can't be generated
* fix up support for R5
***NO_CI***
2021-12-22 19:57:14 +00:00
Paul Robson b785940a2b refactor: inline method 2021-12-22 12:58:35 -05:00
Paul Robson c80b7eae10 refactor: add display name to test 2021-12-22 11:54:19 -05:00
Paul Robson 9171c39d59 refactor: extract private helper methods 2021-12-22 11:53:24 -05:00
Paul Robson f941329fcc bug: check temporary variable hasn't been set yet 2021-12-22 11:50:43 -05:00
Paul Robson 369744488d test: check that coding is translated 2021-12-22 11:50:05 -05:00
Paul Robson 137592ecbf test: check that coding is translated 2021-12-22 11:47:23 -05:00
markiantorno 66ab13dba7 Updating version to: 5.6.19-SNAPSHOT and incrementing test cases dependency. 2021-12-21 22:32:14 +00:00
markiantorno 4e3bde76e9 Release: v5.6.18
## Validator

* Allow both -output and -output-style parameters (output-style applies to output now) + add csv output style
* Implement the ```-level``` parameter
* Add support for R4B validation
* fix bug in deep profiles (profiles that don't start at the root)

## Other code changes

* Regenerate R5 code for 5.0.0-snapshot1 & many consequential changes
* Add version support for R4B and R5 (R4B code generation still to be done)
***NO_CI***
2021-12-21 22:16:52 +00:00
markiantorno a2a5ad1334 Updating version to: 5.6.18-SNAPSHOT and incrementing test cases dependency. 2021-12-18 00:00:06 +00:00
markiantorno af18cc0225 Release: v5.6.17
Validator:
* check StructureDefinition derivation consistency
* fix bug looking for contained resources inside bundles
* fix up determination criteria for IRIs on identifiers in urn:ietf:rfc:3986

Other code changes:
* Add support for new FHIR releases
* Fix escaping bug in graphQL encoder
***NO_CI***
2021-12-17 23:38:05 +00:00
dotasek a635c06af9 Updating version to: 5.6.17-SNAPSHOT 2021-12-17 15:58:22 -05:00
markiantorno f9893fbcb5 Release: v5.6.16
Validator:
* check StructureDefinition derivation consistency
* fix bug looking for contained resources inside bundles

Other code changes:
* Add support for new FHIR releases
***NO_CI***
2021-12-17 19:39:05 +00:00
Grahame Grieve e4d3047138 #357: fix bug looking for contained resources inside bundles 2021-12-17 14:38:21 +11:00
Grahame Grieve 3118cdc132 Add support for new FHIR Versions 2021-12-17 12:08:40 +11:00
dotasek 80382865de Merge branch 'master' into tx-server-cache-analysis 2021-12-15 16:49:39 -05:00
markiantorno 19087d2cb5 Updating version to: 5.6.16-SNAPSHOT and incrementing test cases dependency. 2021-12-15 16:12:57 +00:00
markiantorno 906c5c9785 Release: v5.6.15
Validator:
* fix bug in client caching for unidentified value sets
* look for codesystem definitions in local context
* fix path error in Questionnaire Response validation
* fix up r4b list of canonical resource types
* better version specific resolution of special canonical resources

Other code changes:
* new version of FHIR (4.3.0)
* start using release indicators in FHIR versions
* various generation related fixes for the main specification build process
***NO_CI***
2021-12-15 01:31:54 +00:00
dotasek 89bc6090f2 Updating version to: 5.6.14-SNAPSHOT 2021-12-14 19:54:14 -05:00
markiantorno cf77dd9492 Release: v5.6.14
Validator:
* fix bug in client caching for unidentified value sets
* look for codesystem definitions in local context
* fix path error in Questionnaire Response validation
* fix up r4b list of canonical resource types
* better version specific resolution of special canonical resources

Other code changes:
* new version of FHIR (4.3.0)
* start using release indicators in FHIR versions
* various generation related fixes for the main specification build process
***NO_CI***
2021-12-14 22:45:02 +00:00
dotasek d2c2220ab6 Update core version 2021-12-14 17:09:08 -05:00
Grahame Grieve ea87f94253
Merge pull request #688 from hapifhir/gg-202112-r4b-fixes
main Build fixes: new version of FHIR (4.3.0) + transit to using rele…
2021-12-15 09:03:54 +11:00
Grahame Grieve c15e60f2c6 main Build fixes: new version of FHIR (4.3.0) + transit to using release indicators in version + fix various build issues 2021-12-15 07:28:19 +11:00
dotasek 5cbdc8b49d Updating version to: 5.6.14-SNAPSHOT 2021-12-14 12:04:27 -05:00
markiantorno 6275af3a5e Release: v5.6.13
Validator:
* fix bug in client caching for unidentified value sets
* look for codesystem definitions in local context
* fix path error in Questionnaire Response validation
* fix up r4b list of canonical resource types
* better version specific resolution of special canonical resources
***NO_CI***
2021-12-14 01:44:11 +00:00
dotasek a3fa5a52f1 Updating version to: 5.6.13-SNAPSHOT 2021-12-13 18:28:41 -05:00
markiantorno 0dab4e8e2b Release: v5.6.12
Validator:
* fix bug in client caching for unidentified value sets
* look for codesystem definitions in local context
* fix path error in Questionnaire Response validation
* fix up r4b list of canonical resource types
* better version specific resolution of special canonical resources
***NO_CI***
2021-12-13 21:28:17 +00:00
dotasek fb66078678 Updating version to: 5.6.12-SNAPSHOT 2021-12-13 15:33:32 -05:00
dotasek cbd1394549 Merge branch 'master' into tx-server-cache-analysis 2021-12-13 15:22:21 -05:00
markiantorno 0211796882 Release: v5.6.11
Validator:
* fix bug in client caching for unidentified value sets
* look for codesystem definitions in local context
* fix path error in Questionnaire Response validation
* fix up r4b list of canonical resource types
* better version specific resolution of special canonical resources
***NO_CI***
2021-12-13 18:52:29 +00:00
dotasek d9d1c5afe4 Updating version to: 5.6.11-SNAPSHOT 2021-12-13 13:01:16 -05:00
markiantorno e59194de6b Release: v5.6.10
Validator:
* fix bug in client caching for unidentified value sets
* look for codesystem definitions in local context
* fix path error in Questionnaire Response validation
* fix up r4b list of canonical resource types
* better version specific resolution of special canonical resources
***NO_CI***
2021-12-13 10:51:11 +00:00
markiantorno e310c8c1ef Updating version to: 5.6.10-SNAPSHOT and incrementing test cases dependency. 2021-12-09 22:18:07 +00:00
markiantorno 08dc513480 Release: v5.6.9
Validator:
* enforce minValue and maxValue for decimal and Quantity types
* add checks for whitespace in base64 content (warning in <R5)

Other code changes:
* Fix trailing slashes for JAVA_HOME tests
* remove relative URL prefixing
* Add delayed load resources to all resources
* Don't load resources from core examples package over other resources
* Fix count on erroneous element defintions when generating snapshots
* add version specific access to context resources
* fix error rendering lists with encounter references
* fix error rendering questionnaire answer lists
* improve rendering of version specific and targetted references
***NO_CI***
2021-12-09 21:51:38 +00:00
dotasek 2f9dda50b6 Updating version to: 5.6.9-SNAPSHOT 2021-12-09 15:57:57 -05:00
markiantorno e0b72c5731 Release: v5.6.8
Validator:
* enforce minValue and maxValue for decimal and Quantity types
* add checks for whitespace in base64 content (warning in <R5)

Other code changes:
* Fix trailing slashes for JAVA_HOME tests
* remove relative URL prefixing
* Add delayed load resources to all resources
* Don't load resources from core examples package over other resources
* Fix count on erroneous element defintions when generating snapshots
* add version specific access to context resources
* fix error rendering lists with encounter references
* fix error rendering questionnaire answer lists
* improve rendering of version specific and targetted references
***NO_CI***
2021-12-09 19:57:46 +00:00
dotasek 1c1e7d22ca WIP track server requests 2021-12-07 16:08:28 -05:00
markiantorno 714922a84b Updating version to: 5.6.8-SNAPSHOT and incrementing test cases dependency. 2021-12-06 22:35:25 +00:00
markiantorno 186b0b23b7 Release: v5.6.7
* More import updates
***NO_CI***
2021-12-06 22:04:52 +00:00
markiantorno 5d416f7602 Updating version to: 5.6.7-SNAPSHOT and incrementing test cases dependency. 2021-12-06 19:46:52 +00:00
markiantorno 9bb4807c92 Release: v5.6.6
* Removing unused dependency as it is causing downstream errors in HAPI builds
***NO_CI***
2021-12-06 19:21:58 +00:00
markiantorno 8d873be2a3 Updating version to: 5.6.6-SNAPSHOT and incrementing test cases dependency. 2021-12-06 18:41:00 +00:00
markiantorno 113a89b13b Release: v5.6.5
* Removing IJ annotations
***NO_CI***
2021-12-06 18:13:58 +00:00
markiantorno 444c8951c6 removing jetbrains annotations 2021-12-06 12:54:40 -05:00
markiantorno ac8f2b6ba9 Updating version to: 5.6.5-SNAPSHOT and incrementing test cases dependency. 2021-12-03 06:14:31 +00:00
markiantorno aef3f6fffe Release: v5.6.4
* Add usesExtension to ToolingExtensions
***NO_CI***
2021-12-03 05:47:37 +00:00
markiantorno 71b7409210 Updating version to: 5.6.4-SNAPSHOT and incrementing test cases dependency. 2021-12-02 19:49:44 +00:00
markiantorno 9a5b721220 Release: v5.6.3
* more work on date time test cases
* fix date/time rendering test
* fix bug in code system handling (NPE) + add support for json test cas…
* extend policy advisor to control terminology validation + hack fixes
* fix up SHC parsing problem
* improvements to code system rendering + fix date/time rendering tests

***NO_CI***
2021-12-02 19:23:28 +00:00
dotasek 7c630b6680 Updating version to: 5.6.3-SNAPSHOT 2021-12-02 13:11:27 -05:00
markiantorno f0f49b890d Release: v5.6.2
* more work on date time test cases
* fix date/time rendering test
* fix bug in code system handling (NPE) + add support for json test cas…
* extend policy advisor to control terminology validation + hack fixes
* fix up SHC parsing problem
* improvements to code system rendering + fix date/time rendering tests

***NO_CI***
2021-12-02 16:52:05 +00:00
markiantorno 79a6b81e10 Updating version to: 5.6.2-SNAPSHOT and incrementing test cases dependency. 2021-11-26 15:21:24 +00:00
markiantorno 9717d321b4 Release: v5.6.1
* Validation process now has the option to control level of validation on both references and contained resources,
through the addition of two new interfaces, this is reflected in the new fields I added in fire test cases
(see https://github.com/FHIR/fhir-test-cases/pull/101)
* Improve output for describeSize Utility unit tests.
* Fix logging of requests for dstu3
***NO_CI***
2021-11-26 14:55:52 +00:00
Mark Iantorno 4d0692ff61
Validate contains (#669)
* wip

* first go at this, still some failing tests

* post-pairing with Grahame

* wip

* failing test cases

* fixed InstanceValidator to respect new validation options for both references and contained resources

* removed dead code

* put copyright back in BaseValidator

* wip
2021-11-25 15:52:29 -05:00
markiantorno 1ac0e90c07 Updating version to: 5.6.1-SNAPSHOT and incrementing test cases dependency. 2021-11-22 21:58:23 +00:00