490e588cf3
First draft of generation for extensions
2023-03-24 22:19:17 +11:00
272f00e786
move web path out of user data into resource field
2023-03-24 22:18:52 +11:00
b8777319da
update tests to use R5 package from test case repo everywhere
2023-03-24 10:18:42 +11:00
fcd6484657
finish removing population type
2023-03-24 10:17:48 +11:00
f98c2b2f03
more r5 updates
2023-03-24 01:45:34 +11:00
adf6d5e3a0
updates for R5 final
2023-03-23 20:49:30 +11:00
f122dc164f
update code for R5 final
2023-03-23 20:48:38 +11:00
417bae01b1
more work to sort out mappings
2023-03-22 23:05:44 +11:00
aba6e8958d
fix broken links
2023-03-22 13:44:52 +11:00
19760bcaf2
add todo note
2023-03-22 13:44:19 +11:00
085ce861d8
remove warning when profile-element is used
2023-03-21 19:14:00 +11:00
851d9c149d
Merge remote-tracking branch 'origin/master'
2023-03-21 17:41:52 +11:00
5444c3a33a
Inline help6.png in resources
2023-03-21 17:26:51 +11:00
075bb46fa3
Suppress value set expansion for core value sets that tx.fhir.org is handling wrongly
2023-03-21 17:26:24 +11:00
bb61229931
suppress NPE in profile comparison
2023-03-21 17:25:56 +11:00
98a7f26b84
fix problem with composition library reference in R4
2023-03-21 17:25:45 +11:00
50f2d05a87
Merge pull request #1176 from aehrc/ml-202303-fix-1175-incorrect-type-in-validate-code-call
...
Make url parameter type UriType, not StringType
2023-03-21 07:59:20 +11:00
900faa2450
part of fix for type checking
2023-03-21 06:12:16 +11:00
71a19710a0
Fix for where profile_element extension was being ignored when checking types after snapshot generation
2023-03-21 06:12:02 +11:00
2fbb607f81
Fix generated name for FML rules to be a valid name
2023-03-21 06:04:31 +11:00
11c80f7d00
allow loaders to decide which resources to load into the context
2023-03-21 06:03:36 +11:00
813a850730
adjust mappings handling code generating diffs
2023-03-19 08:52:37 +11:00
14edde2ab8
Make url parameter type UriType, not StringType
2023-03-18 10:33:16 +10:00
f8a19a1bae
Refactor how mappings are handled when generating differentials: in R5, mapping names are unique
2023-03-18 05:47:33 +11:00
fe538ea530
fhirpath tests on element model
2023-03-17 07:56:06 +11:00
72d97a2960
better error messages setting properties when transforming
2023-03-17 07:55:53 +11:00
d9c632d9ad
better error messages converting types
2023-03-17 07:55:32 +11:00
413cbb115a
fix issues with R3R4MapTester
2023-03-16 14:08:00 +11:00
27598a382d
Fix issues with xhtml handling
2023-03-16 14:07:11 +11:00
4a7abab5e8
Fix for parsing Bundle.issues
2023-03-16 14:05:54 +11:00
19cb639d37
refactor how types are handled loading packages
2023-03-16 13:26:34 +11:00
824f51f82e
fixing broken links, and r4/r5 map testing
2023-03-14 13:24:00 +11:00
46ed0157ce
fix bug parsing FML metadata
2023-03-13 13:53:27 +11:00
a6466f4265
add url and md escaping and unescape in FHIRPath + 2nd param to join()
2023-03-13 13:53:04 +11:00
753a90b463
fix bug listing types when old versions are loaded
2023-03-13 13:52:31 +11:00
7b30dc02f9
check for NPE
2023-03-13 05:10:08 +11:00
96f265653e
fix run time test
2023-03-12 23:02:46 +11:00
f11bdb9560
fix NPE
2023-03-12 21:55:44 +11:00
2dc72fcaf1
fix bug parsing FML (id)
2023-03-12 21:54:21 +11:00
43253e8d10
improve extension representation
2023-03-12 21:53:38 +11:00
525ba127e8
make sorter public and static
2023-03-11 18:59:31 +11:00
26ed139031
fix up build extensions
2023-03-11 18:58:35 +11:00
571c170e13
hack observation for change
2023-03-11 18:54:35 +11:00
83f608597a
fix errors rendering mapping file
2023-03-11 18:53:53 +11:00
939d1d06c0
improve error message
2023-03-11 18:53:29 +11:00
10d560c859
Add support for locally processed special case code systems (and an example - rgb)
2023-03-10 21:28:08 +11:00
1212b85b5e
Change from Error to FHIRException when wrong value type is wrong on polymorphic element
2023-03-10 16:12:59 +11:00
909f7e64fe
Additional zip-slip tests ( #1162 )
...
* Additional zip-slip tests
* Fix windows path test
2023-03-09 14:30:53 -05:00
9e87e6915c
Fix for NPE in R5 IG
2023-03-09 22:20:10 +11:00
3338cfbe39
fix issues parsing test maps
2023-03-09 20:57:37 +11:00
95813d9004
Fix FML Comments parsing, and add StructureMap rendering to pretty FML
2023-03-09 19:44:57 +11:00
ce246df4a0
fix comment parsing
2023-03-09 19:44:06 +11:00
187d3e98c7
More fixes for structure map validation
2023-03-09 09:11:31 +11:00
0e41463886
move test cases
2023-03-08 15:32:52 +11:00
eb852a8d03
mark location for input parsing FML
2023-03-08 11:48:37 +11:00
015d53e8ee
fix problem parsing types
2023-03-08 09:11:00 +11:00
4486c12df5
fix location bugs in FML parsing
2023-03-07 21:47:38 +11:00
6bf26255ab
fix structure map validation issues around type
2023-03-07 20:58:51 +11:00
bbc3cd5121
Fix FML parsing missing locations
2023-03-07 20:58:01 +11:00
0c26f09721
revise whitespace handling for unicode conformance in validator
2023-03-07 06:25:45 +11:00
6fe16d1812
fix bug parsing parameters in FML
2023-03-06 20:44:17 +11:00
36d22c522a
make xhtml nodes use less memory
2023-03-06 10:32:54 +11:00
356e500ab6
finish ConceptMap validation
2023-03-05 23:25:12 +11:00
ec72b1fcdd
fix parsing and validating of concept maps in structure maps + validate terminology part of structure maps
2023-03-05 18:29:11 +11:00
8ac01bd5a4
update conversions for discovered issues for R5
2023-03-03 06:30:49 +11:00
5e070b226b
Add back code missed when regenerating R5
2023-03-03 06:30:10 +11:00
99d2421014
fix using wrong version of extensions package
2023-03-02 08:49:22 +11:00
042c1dd29e
last qa fixes for R5 preview
2023-03-01 23:46:32 +11:00
68090356cb
Update for regenerated java code in 5.0.0-draft-final
2023-03-01 21:49:49 +11:00
2e11041fc5
Regenerate R5 for 5.0.0-draft-final
2023-03-01 21:49:11 +11:00
0425a2beff
suppress spurious log message
2023-03-01 05:30:10 +11:00
fe9eaca741
Merge remote-tracking branch 'origin/master'
2023-03-01 04:54:25 +11:00
94de728553
Merge pull request #1144 from hapifhir/do-20230227-fhircat-shex-fix
...
Fix for build failures in #1120
2023-03-01 04:54:10 +11:00
85eea1df09
tidy up generator code
2023-02-28 22:51:16 +11:00
4055635396
Merge pull request #1143 from hapifhir/gg-202302-fhirpath-where-cleverness
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pick up types in FHIRPath when filtering references with .where(resol…
2023-02-28 21:44:10 +11:00
18abfdc920
pick up types in FHIRPath when filtering references with .where(resolve() is X)
2023-02-28 20:51:08 +11:00
64cea66959
Merge pull request #1141 from balhoff/anyuri-types
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Output literal datatypes for anyURI types in RDF examples
2023-02-28 16:29:27 +11:00
1a88c6ebc8
fix for R5 hack
2023-02-28 11:13:19 +11:00
83a323ac33
Merge branch 'hapifhir:master' into master
2023-02-27 14:04:23 -06:00
13fbf16daa
Output literal datatypes for anyURI types.
2023-02-27 13:40:01 -05:00
6ba6a0ae62
Removed BASE directive, sorted value-set rendering and correct imports
2023-02-27 12:23:20 -06:00
a593e9a60d
Minor correction to align with FHIR R5 RDF changes
2023-02-27 02:18:24 -06:00
4c30621491
structuremap validation and invariant fixes for forthcoming R5 release
2023-02-27 18:32:38 +11:00
5fde3a2106
Minor correction to align with FHIR R5 RDF changes
2023-02-26 21:44:07 -06:00
2bd73c650e
Work on StructureMap validation
2023-02-27 07:30:04 +11:00
e64461e940
Corrected TypeArcs and Node Roles
2023-02-24 23:12:43 -06:00
d3a407e369
FML validation
2023-02-25 14:05:03 +11:00
9ca531ff0a
Added IMPORT for all SDs, enabled batch SD ShEx Generation. Disabled Context translation temporarily
2023-02-23 23:19:13 -06:00
3c0fb89cd7
Merge pull request #1121 from costateixeira/master
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StructureDef: remove example label when no label is given
2023-02-24 11:40:20 +11:00
b12dbe2dfe
Merge pull request #1134 from hapifhir/gg-202302-conceptmap-hack
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Gg 202302 conceptmap hack
2023-02-24 10:41:18 +11:00
521e72a5ff
Merge pull request #1110 from balhoff/rdf-wg-r5-with-generated
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Implement R5 RDF format changes
2023-02-24 10:21:19 +11:00
b2ef9a3336
fix typo
2023-02-24 09:02:52 +11:00
cf2ddda8d7
workarounds for forthcoming ConceptMap change
2023-02-24 06:52:51 +11:00
5728cf94c2
Adjusted Tests for Build
2023-02-22 00:10:15 -06:00
2adf054733
Correction in ShEx Translation of FHIRPath Constraints
2023-02-22 00:05:56 -06:00
3eda8580fc
fix rendering for conditional references
2023-02-21 16:46:02 +11:00
b38c8c3ae7
track target types on references in FHIRPath
2023-02-20 23:47:50 +11:00
8a354849a7
add standardsStatus support to core model
2023-02-20 16:47:02 +11:00
b653129d1a
minor type checking fixes for FHIRPath
2023-02-20 10:43:53 +11:00
98f4a02789
fix bugs in type checking discovered during R5 preparation
2023-02-18 15:14:24 +11:00
1b86b29d1f
fix bug caused by changing DiagnosticReport.conclusion to markdown
2023-02-18 15:13:37 +11:00
38a55d261d
update table generator to suppress external links in base row and column
2023-02-18 15:13:13 +11:00
dadc3701e4
Added method comments for better understand of utility method usage
2023-02-17 15:59:54 -06:00
0e2e333fa9
remove example label when not existing
2023-02-17 21:56:51 +01:00
3eff78bdb9
Updated code to leverage EXTENDS and not duplicate datatype definitions with usage
2023-02-16 18:57:06 -06:00
e6ca865d68
ShExGenerator Tests included from working branch
2023-02-15 23:28:50 -06:00
b248d00ee7
ShExGenerator.java Changes included from working branch
2023-02-15 23:21:58 -06:00
53710b5390
Merge branch 'rdf-wg-r5' into rdf-wg-r5-with-generated
2023-02-15 10:00:28 -05:00
7f454098b9
search parameter rendering improvements
2023-02-15 12:14:48 +11:00
26f7b3a803
FHIR-38789 SD_Dependencies extension needs work
2023-02-15 12:12:28 +11:00
5c413822bd
Search Parameter Rendering improvements
2023-02-15 11:55:18 +11:00
97772ada1e
Merge branch 'master' into rdf-wg-r5
2023-02-14 13:47:28 -05:00
b46160bc8b
FHIR-27761 Tooling issues around multi-level Operations
2023-02-14 15:08:55 +11:00
de3ec0d27b
fix npe + render OperationDefinition parameter standards status
2023-02-14 12:34:19 +11:00
d9f98902b9
fix npe
2023-02-14 11:01:59 +11:00
d5d83bea9c
fix broken links in R5 builds
2023-02-14 09:53:22 +11:00
d67470a6e1
Add MeSH triples.
2023-02-13 14:24:49 -05:00
4ae0dfe8f4
rendering fixes
2023-02-13 20:29:56 +11:00
ccb5004766
fix issues with URL regex
2023-02-13 11:07:11 +11:00
a72ccaa0ed
Merge branch 'rdf-wg-r5' into rdf-wg-r5-with-generated
2023-02-10 12:43:35 -05:00
a547458274
Update loinc namespace.
2023-02-10 12:43:15 -05:00
bd424e7b60
fixes after more testing
2023-02-10 16:18:33 +11:00
11c887edc5
FHIR-34417: implementations for comparable(), highBoundary(), lowBoundary()
2023-02-10 10:02:40 +11:00
92cae24b1b
Add generated RdfParser code.
2023-02-08 14:09:01 -05:00
ba731b0051
Fix R5 loading problem
2023-02-07 09:53:51 +10:00
1d4f1e9d90
fix bug with duplicate value in getResourceNames()
2023-02-06 05:38:02 +11:00
e4925ea762
minor fixes for extension rendering
2023-02-03 18:42:05 +11:00
2628f6fac1
FHIRPath changes for as - case and singleton issues
2023-02-03 12:11:53 +11:00
f7ad38cc34
fix type of issue source extension
2023-02-02 16:39:53 +11:00
d596a6c343
Use leading underscore for properties with objects with modifier extensions.
2023-02-01 19:49:24 -05:00
12bf57886f
For resources with a modifierExtension, use a leading underscore for the rdf:type.
2023-02-01 13:05:47 -05:00
4a79e89f62
Merge remote-tracking branch 'origin/master'
2023-02-01 14:49:19 +11:00
2cc8ff5e23
extension related validation fixes
2023-02-01 14:49:14 +11:00
61e63b128a
Enhancements to StructureMap transform to support logical models as source and value set lookup ( #1092 )
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* implement resolveValueSet from AHDIS Matchbox
* get SD from map source type, set logical model
* test for getSourceResourceFromStructureMap DefinitionException
* test resolveValueSet
* test transform logical source
* fix formatting
2023-01-31 16:56:02 -05:00
69ce2b45f2
Output lists in examples using RDF lists. Don’t output fhir:index.
2023-01-31 14:11:29 -05:00
7ad4bd62c6
fix for NPE rendering resources
2023-01-31 07:23:12 +11:00
d859e0b4bd
Temporary Support for MedicationStatement in R5 (going to be renamed again)
2023-01-31 07:22:33 +11:00
890971d110
Output type triples for value[x] nodes. Use simple property names.
2023-01-27 17:35:36 -05:00
00d1ab3517
Use fhir:v for literal values in examples.
2023-01-22 19:14:49 -05:00
b7576dee79
Don’t output ontology import declaration in examples.
2023-01-22 19:14:08 -05:00
b50aec5912
Advisory fix 1 ( #1089 )
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* Update cache and comparison downloads to use https
* Zip Slip tests and fix
* Zip Slip tests 2 and fix
* Add missing tempDir child in ScannerTest
* Add win format zip test
* Add tests to r4b
* Add tests and fixes for slips in tgz processing
* Update fhir-test-cases version
2023-01-20 16:56:57 -05:00
2c93585bb6
better error message
2023-01-21 07:36:09 +11:00
f8e6371e1f
Merge branch 'master' into gg-202301-sm-errors
2023-01-20 19:44:24 +11:00
b16fc37b02
clean up error handling when parsing structure maps
2023-01-20 04:24:42 +11:00
f58b7acfb5
Swaps isBase64 with internal implementation for Android compatibility ( #1079 )
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* Adding animal sniffer to display all issues related to android compatibility.
* Duplicate isBase64 internally
Co-authored-by: Vitor Pamplona <vitor@vitorpamplona.com>
Co-authored-by: dotasek <david.otasek@smilecdr.com>
2023-01-18 18:40:24 -05:00
7cc01ef7db
update new FHIRPath for older versions
2023-01-19 07:57:05 +11:00
26027fa3d6
update FHIRPath implementation for discussion at 84a07a6a92
2023-01-19 06:59:45 +11:00
c9833f94d3
Add ElementModel based StructureMap parser
2023-01-18 12:32:06 +11:00
7b99037199
fix BOM in java files
2023-01-17 12:49:14 +11:00
daf5638f3e
Fix significant performance issue generating xlsx for multiple profiles
2023-01-17 11:23:39 +11:00
8cb7e40815
Improved Error message if profile root has slicing
2023-01-17 11:23:14 +11:00
01c131b29d
see PR 1075 - fix issue with setProperty() ignoring extensions
2023-01-17 11:22:42 +11:00
41abbb21a0
fix debug logging for snapshot generation
2023-01-17 05:36:44 +11:00
1df68c95a4
Fix rendering when binding strength missing
2023-01-16 10:13:11 +11:00
6c2a488402
fix type convertors to handle null
2023-01-16 10:12:59 +11:00
a06803d936
Start implementing loading structure maps with validation
2023-01-14 08:45:13 +11:00
90f7214195
test NPE in markdown processing
2023-01-10 11:34:41 +11:00
8902898428
better tracking and reporting of snapshot generation issues
2023-01-09 08:03:24 +11:00
c828ce9eb7
fix URL TO URI
2023-01-06 10:41:21 +11:00
45cf907204
kindling compile fixes
2023-01-05 08:43:30 +11:00
673e36b989
Merge branch 'master' into rdf-wg-r5-merging
2023-01-04 15:04:48 -05:00
f3fc19a906
refactor profile generation (utils -> renderer) + add new views
2023-01-03 14:54:11 +11:00
b014401dd4
refactor profile rendering (more to StructureDefinitionRenderer)
2023-01-01 11:12:44 +11:00
aacefd6581
Merge remote-tracking branch 'origin/master'
2022-12-31 11:06:47 +11:00
b894cc6da7
Merge pull request #1048 from qligier/pr-fix-text-appending
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Fix appending text in ProfileUtilities
2022-12-31 09:10:24 +11:00
c1262d50c5
fix up cardinality issues
2022-12-30 07:20:06 +13:00
1380c5e52d
Fix test breakage caused by capitalization
2022-12-29 13:17:47 -05:00
be9c36e037
more PE work
2022-12-29 21:37:44 +13:00
5e67c5a57e
more work
2022-12-29 17:16:40 +13:00
44ecfbf53d
more PE work
2022-12-29 10:18:47 +13:00
d532af808b
more work on PE definitions
2022-12-28 16:11:45 +13:00
50bc157ab9
more work on PE
2022-12-28 08:38:27 +13:00
44b25be2a5
warning
2022-12-26 13:51:54 +13:00
abf8dca07b
more doco
2022-12-26 13:51:16 +13:00
9959183017
more work on PEDefinition
2022-12-26 13:28:22 +13:00
900f471dda
upgrade test case dependency
2022-12-24 08:42:02 +13:00
f87394b46e
start implementing ProfiledElement
2022-12-24 07:30:09 +13:00
0827dc32f1
Merge remote-tracking branch 'origin/master'
2022-12-24 07:29:17 +13:00
a24d34a471
Merge remote-tracking branch 'origin/master'
2022-12-24 06:53:43 +13:00
858c06f097
Fix appending text in ProfileUtilities
...
If the base text was null, appending a text in the derived element (using "...") would show a "null" before the text. This commit adds the method Utilities.appendDerivedTextToBase() to implement to correct behavior.
2022-12-23 18:52:47 +01:00
b404c89aa9
Profile Utilities Refactor 2 ( #1047 )
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* Add test util for diff
* Start moving pathprocessor params into dedicated object
* Move diff to Params
* Move base and diff Limits to params
* Rename to newBaseCursor and newBaseLimit
* More renames
* Move url and webUrl to params
* Move profileName to params
* Add contextPathSource to params, adjust indent for processPaths calls
* Move contextPathTarget to params
* Code cleanup, unused variables + move trimDifferential to params
* Create PathSlicingParams
* Shuffle param order
* Move redirector to params
* Move sourceStructureDefinition to params
* Move derived to params
* Move debug statements to dedicated methods
* split processSimplePath
* split processPathWithSlicedBase
* Start splitting ProfilePathProcessor
* Move all params into ProfilePathProcessor
* Move all profile utility related classes to own package
Co-authored-by: dotasek <david.otasek@smilecdr.com>
2022-12-23 09:27:42 -05:00
fd77fd16d0
round trip constraint xpath after R5 changes
2022-12-23 15:14:25 +13:00
2f0a45046e
liquid fixes to FHIRPath
2022-12-20 23:09:44 +13:00
e2dff7d118
change name
2022-12-20 08:48:55 +13:00
96810c984b
revise draft
2022-12-20 08:47:30 +13:00
b6d35314f6
fix bug in cross version extension generation
2022-12-19 22:51:04 +13:00
d8dacd260f
Candidate service for working with profiles in applications
2022-12-19 17:20:31 +13:00
4028d9930b
Merge pull request #1041 from alexey-tschudnowsky/ISSUE_1040_Profile_Compare_NullPointerException
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fixes #1040 (NullPointerException while comparing profiles)
2022-12-17 08:09:12 +11:00
6b1ae35ef3
* Add validator support for fhir_comments in R2/R2B ( #1042 ) + Add validator checks around versions in extension URLs
2022-12-17 07:11:06 +11:00
85931f9ff2
commit version-base
2022-12-17 05:56:37 +11:00
84508415ef
fixes #1040
2022-12-16 16:46:49 +01:00
bd85546820
reintroduce hack for invalid template OO json
2022-12-16 11:27:48 +11:00
64cc3771a6
fix tests to get versions consistent
2022-12-16 08:49:14 +11:00
415d8acc12
Add R5 snapshot3 to R4 versions enum
2022-12-16 08:48:24 +11:00
72eae55218
fix new bug in package manager
2022-12-14 09:59:25 +11:00
2a7136021f
Allow any for resource enum
2022-12-14 07:05:39 +11:00
38c4785236
reverse SearchParameter.base change
2022-12-14 06:29:21 +11:00
0cf8cbcba5
fix failing tests
2022-12-13 22:17:45 +11:00
d1d391496e
upgrade to new R5 release
2022-12-13 21:13:29 +11:00
5f2317a87c
Merge remote-tracking branch 'origin/master'
2022-12-09 23:34:24 +11:00
dd7ca2182a
rendering improvements for deprecated codes
2022-12-09 23:28:58 +11:00
f8a0e82785
Add standards status reason
2022-12-09 20:08:51 +11:00
771fb0ac00
Changes related to validation of document and message links
2022-12-09 11:09:17 +11:00
73cd123234
Merge pull request #1028 from hapifhir/gg-202212-xlsx-csv
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Gg 202212 xlsx csv
2022-12-07 06:11:32 +11:00
3ee52938d6
updates for all-profiles csv and xlsx
2022-12-06 16:21:33 +11:00
a67ca99786
Profile Utilities refactor ( #1027 )
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* Refactor 1 rename and starter comments
* Refactor 2 more renaming make method for match
* Make final what can be final
* Wrap root call to processPaths
* WIP Create ProfilePathProcessor
* Redo method scoop, move internal classes
* Use profileUtilities instance
* Finish scoop. Tests pass.
* Finish scoop for real this time.
* Encapsulate cursors
* Delete unused params
* Split path processing into two branches
Co-authored-by: dotasek <david.otasek@smilecdr.com>
2022-12-05 17:32:16 -05:00
a0c28f3326
Round trip XHTML faithfully wrt empty elements
2022-12-05 13:41:31 +11:00
cacf27428e
Fix rendering of Timing to not have specific verb
2022-12-05 13:41:01 +11:00
54875fd17e
fix broken link to base spec
2022-12-05 13:40:17 +11:00
8b5cb283af
suppress logging
2022-12-01 08:26:07 +11:00
d24cc6c5ee
Merge remote-tracking branch 'origin/master'
2022-12-01 08:22:19 +11:00
8d6f2ff57d
Merge pull request #1020 from ahdis/oe_r5_structuremap_cast
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FHIR Mapping Language: cast support for more types #1019
2022-12-01 08:18:27 +11:00
fedfa88ffb
refactor resource reference resolution to use package dependencies whereever possible
2022-12-01 08:16:00 +11:00
d79ac9ba66
Merge remote-tracking branch 'origin/master'
2022-11-30 16:34:51 +11:00
518e5559c7
fix for #1022
2022-11-30 10:20:57 +10:00
8f9261febf
#1022 - fix expected type for Code Validation parameters
2022-11-30 11:04:47 +11:00
aaa53cdfb0
#1005 - fix graphql processing issue
2022-11-30 08:32:25 +11:00
5225640e50
Merge pull request #1018 from hapifhir/ja_20221129_graphql_type_cleanup
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Correct GraphQL Schema Validation Errors
2022-11-30 08:18:35 +11:00
2d8885d4e3
FHIR Mapping Language: cast support for more types #1019
2022-11-29 22:15:02 +01:00
2744b5eeed
Fixes to schema generator
2022-11-29 14:42:47 -05:00
8f1f961315
Revert "BugFix: Accepts null base in all implementations of FHIRPathEngines.evaluate(Base base, String path) to match all other evaluate methods. ( #1015 )" ( #1017 )
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This reverts commit ba828cbb0e
2022-11-29 14:39:59 -05:00
ba828cbb0e
BugFix: Accepts null base in all implementations of FHIRPathEngines.evaluate(Base base, String path) to match all other evaluate methods. ( #1015 )
2022-11-29 14:35:39 -05:00
1048a483a2
Fix turtle generation ( #1014 )
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Co-authored-by: Grahame Grieve <grahameg@gmail.ccom>
2022-11-29 11:29:04 -05:00
adfd0d26e6
Fix turtle generation
2022-11-30 01:40:07 +11:00
82bd4e5c25
Work on cleanup
2022-11-29 07:54:58 -05:00
1b07d221ea
Merge remote-tracking branch 'origin/master'
2022-11-28 12:28:07 -03:00
a49a82aab5
capture exception chasing references
2022-11-28 12:27:41 -03:00
9405d0b715
Fix problems validating logical models
2022-11-28 12:27:26 -03:00
35774955ae
Produce Standards Status in tree view
2022-11-28 12:26:58 -03:00
65863d88d1
Merge pull request #1012 from hapifhir/gg-202211-json-comments
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Consistency around rendering comments in examples in IGs
2022-11-27 05:33:35 -03:00
49f798de48
Consistency around rendering comments in examples in IGs
2022-11-26 22:24:17 -03:00
83b2921c2e
Merge pull request #1011 from hapifhir/gg-202211-json5
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update JSON parser used by validator to JSON5 parser
2022-11-26 19:22:05 -03:00
53fb08ab19
update JSON parser used by validator to JSON5 parser
2022-11-26 18:24:29 -03:00
e189ae2b76
Merge pull request #1001 from ahdis/oe_np_with_structuremaps
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fix np and index out of bound exception
2022-11-26 01:00:34 -03:00
21bd9bf7e9
improve parsing speed for json resources
2022-11-25 22:36:51 -03:00
8f1e6f2c59
Improve parsing speed for Json resources
2022-11-25 22:36:38 -03:00
275d83a4c7
work around bug in template OO
2022-11-25 22:36:14 -03:00
962f3f09ea
prepare for changing the way the IG publisher generates narrative
2022-11-24 18:02:21 -03:00
80f275ff18
upgrade to new JSON parser
2022-11-24 17:57:46 -03:00
b3cc460ccd
fix nullpointer exceptions
2022-11-22 16:19:16 +01:00
6bdf3389bb
fix bug missing R5 definitions in publisher
2022-11-22 06:38:01 -03:00
74b1b7f201
fix rendering issue when reference.reference missing
2022-11-22 05:58:17 -03:00
24331956f1
Add rule date to validation messages so new rules can be highlighted
2022-11-22 05:58:02 -03:00
8136b00c86
work on loading speed for validator
2022-11-21 18:46:47 -03:00
68360cb110
Fix issue handling path on content references on deeply nested content
2022-11-21 18:45:33 -03:00
5cda3573be
fix for non-breaking space usage
2022-11-20 12:27:41 -03:00
8e3833f58a
Fix broken LOINC link
2022-11-19 03:39:35 -03:00
b4d21b8263
Merge pull request #994 from hapifhir/gg-202211-xhtml-entities
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Gg 202211 xhtml entities
2022-11-17 16:57:04 -03:00
4fa05d8297
fix bug producing html entities in XHTML in resources when rendering
2022-11-17 15:21:39 -03:00
28d107b4ae
Validate XHTML entities in XML
2022-11-17 15:21:17 -03:00
82972d5216
Add https-proxy param + fix proxy authorization header ( #888 )
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Co-authored-by: dotasek <david.otasek@smilecdr.com>
2022-11-17 11:27:21 -05:00
47443acaf3
prepare release
2022-11-16 18:36:02 -03:00
cf7ef7218a
Merge pull request #979 from lmckenzi/NewIGHelp
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Change default help location for tables
2022-11-15 07:18:13 +11:00
d724d48f89
Do remove excluded tests 2 ( #988 )
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* WIP remove excluded tests + disable breaking test
* Fix failing test, document test cases.
* Code cleanup
The following are cherry picked from GG branch:
* Fix problem with value set validator hiding errors
* Fix issue rendering resource by name
* fix error location
Co-authored-by: dotasek <david.otasek@smilecdr.com>
Co-authored-by: Grahame Grieve <grahameg@gmail.ccom>
2022-11-14 13:30:26 -05:00
db643e8eca
fix typo
2022-11-10 10:00:26 +11:00
21b0577249
track hint about code validation
2022-11-10 05:16:10 +11:00
b7a882114d
accept code/display from CLD if no code system available
2022-11-10 05:15:27 +11:00
96218a5ce4
refactor resource narrative generation rules
2022-11-10 05:14:59 +11:00
11c369ea09
Remove all _PLURAL labels from constants
2022-11-07 16:52:47 -05:00
183f9ecfd2
Remove _PLURAL labels from keys
2022-11-07 16:39:40 -05:00
6b5d184f89
Merge remote-tracking branch 'origin/master' into do-i18n-plurals
2022-11-07 14:52:40 -05:00
a6ba8fd67a
Fixed HL7 Validator CLI Jurisdiction Output ( #980 )
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* Failing test
* Fixed breaking jurisdiction test
Co-authored-by: dotasek <david.otasek@smilecdr.com>
2022-11-07 11:59:33 -05:00
ffec2ce1c5
Merge remote-tracking branch 'origin/master' into do-i18n-plurals
2022-11-07 09:23:36 -05:00
1d9b05a27b
Changed flyover for constraints to say "constraint" instead of "invariant"
2022-11-05 23:26:13 -06:00
c835201f36
Merge remote-tracking branch 'origin/master'
2022-11-06 10:16:22 +11:00
4b0c42c832
Fix bug with jurisdiction locale in validator
2022-11-06 10:12:36 +11:00
d19ff2e1f6
Merge pull request #972 from hapifhir/do-terminology-cache-filewpipechar
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Fix pipes in terminologyCache files
2022-11-06 07:04:58 +11:00
305f93ca26
Fix broken SDC links in Q & QR rendering
2022-11-05 11:30:27 +11:00
01411cfa6c
regenerate R5 (ActivityDefinition.kind = TASK), and check synced for RDF Generation issues
2022-11-05 11:28:11 +11:00
99bd733fe0
Update tests + fix 11073 codesystem
2022-11-03 16:33:56 -04:00
6ecd4c70fe
Parse out version for all systems in TerminologyCache files
2022-11-03 14:29:38 -04:00
fc7cd56335
Merge remote-tracking branch 'origin/master' into do-i18n-plurals
2022-11-03 13:35:40 -04:00
74659e4648
Merge remote-tracking branch 'origin/master' into do-terminology-cache-filewpipechar
2022-11-03 12:51:19 -04:00
c49a2c0fc5
Fix link to extension style
2022-11-03 15:59:42 +11:00
2519858dcd
update logical model snapshot generation and validation
2022-11-03 15:59:22 +11:00
16a0a08598
Parse out canonical url version + refactor
2022-11-02 16:58:28 -04:00
8e663f3ce9
Merge branch 'master' into do-terminology-cache-filewpipechar
2022-11-02 11:08:45 -04:00
16e21c5bbe
fix bug in simple http client when no accept header is set
2022-11-02 20:57:05 +11:00
68a3b6c808
process markdown relative references
2022-11-02 20:56:40 +11:00
c8bf2aa4e5
fix issue with contained resources not rendering
2022-11-02 20:56:17 +11:00
ca96bbfdc4
fix bug where ElementModel paths are not populated
2022-11-02 20:55:35 +11:00
261462b348
Fix for NPE on invalid bundles
2022-11-02 08:52:02 +11:00
1ae7093eef
#934 Parameters object's getParameter(String theParameterName) is misnamed
2022-11-02 08:51:17 +11:00
5558f0458f
Refactor
2022-10-31 14:53:50 -04:00
942777da11
Fix token name for code system
2022-10-31 14:27:03 -04:00
21037e2cdf
Failing test
2022-10-31 14:22:46 -04:00
269680608f
Merge master
2022-10-31 09:50:26 -04:00
5116536617
Finish CDS hooks extension validation
2022-10-29 19:18:19 +11:00
ddf769851b
improve error messages in json parser
2022-10-29 11:59:00 +11:00
27511f40dd
Add support for json-primitive-choice
2022-10-29 09:11:09 +11:00
25ef2dca4d
Merge remote-tracking branch 'origin/master' into do-i18n-plurals
2022-10-28 14:54:37 -04:00
2de6340cfa
Rename PL to Plural in method signatures
2022-10-28 14:44:09 -04:00
1e046a0d00
fix for NPE rendering patient photo
2022-10-28 21:59:08 +11:00
27febc03ef
inherited type URLs
2022-10-28 21:58:59 +11:00
63767a78c3
more work in CDS Hooks extensions
2022-10-28 17:49:22 +11:00
83dfcd398c
Fix problem with determining implied code system
2022-10-28 09:09:48 +11:00
a70fc37b87
Fix NPE processing snapshot
2022-10-26 23:20:31 +11:00
b187d289b6
fixes for plural messages for i18n
2022-10-26 14:30:25 +11:00
887b4be428
caching Requirements and ActorDefinitions
2022-10-25 15:03:26 +11:00
5be607152c
Add summary rendering for references
2022-10-25 15:03:03 +11:00
Grahame Grieve
Grahame Grieve
Michael Lawley
dotasek
Deepak Sharma
Jim Balhoff
dksharma
Jose Costa Teixeira
Neelima Karipineni
dotasek
Quentin Ligier
Alexey Tschudnowsky
Oliver Egger
James Agnew
Vitor Pamplona
Hank Yang
Lloyd McKenzie