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1343 Commits

Author SHA1 Message Date
Grahame Grieve 5a33d5c15a merge conflicts + rework rendering + gather all HTTP access to SimpleHTTPClient + add TerminologyCacheManager 2021-11-09 16:24:21 +11:00
markiantorno 7bcd2b6434 Adding changes for logging request and resp 2021-11-08 16:10:04 -05:00
Grahame Grieve d91b26e69b Add getServerVersion to tooling client 2021-11-09 06:13:18 +11:00
Grahame Grieve 227664a9b3 fix versions for 5.0 extensions 2021-11-05 17:25:14 +11:00
Grahame Grieve 43c25ae4f8 fix rule around request/response when logging 2021-11-05 17:14:08 +11:00
Grahame Grieve 80e1606bf9 fix broken links 2021-11-05 17:09:59 +11:00
Grahame Grieve 27852389d6 fix missing logging of requests 2021-11-04 12:41:27 +11:00
dotasek 83b1702cc5
SHCParser file cleanup (#640) 
* Use File.createTempFile to manage SHCParser payload writing

* Undo auto-reorg imports

* Remove JsonTrackingParser.write
 2021-11-03 10:40:06 -04:00
markiantorno 52cbe69651 Updating version to: 5.5.11-SNAPSHOT and incrementing test cases dependency. 2021-11-03 04:58:39 +00:00
markiantorno 2c2fb1179a Release: v5.5.10 
Validator
* Fix validation of RiskAssessment probability
* Don't check MeasureReport groups if Measure doesn't have any groups

Other code changes
* Fix generation of GraphQL schema
* remove spurious log files
***NO_CI***
 2021-11-03 04:32:39 +00:00
Grahame Grieve 4cde3369ff
Merge pull request #637 from hapifhir/gg-202110-CVE-2021-42574 
Gg 202110 CVE 2021 42574
 2021-11-03 12:08:42 +11:00
Grahame Grieve 5494b14b4b fix tests 2021-11-03 11:33:50 +11:00
Grahame Grieve c8c96e13fd
Merge pull request #615 from lschmierer/graphql_fixes 
Fix GraphQLSchemaGenerator to produce valid GraphQL schemas
 2021-11-03 11:26:45 +11:00
Grahame Grieve 36ea3f5b45 whatever I really hate git 2021-11-03 10:35:47 +11:00
Grahame Grieve 57edd95e81 add -no_unicode_bidi_control_chars to the validator for CVE-2021-42574 (https://trojansource.codes/) 2021-11-02 17:47:25 +11:00
markiantorno ccd8567edb Updating version to: 5.5.10-SNAPSHOT and incrementing test cases dependency. 2021-10-29 21:37:57 +00:00
markiantorno 9f789edd41 Release: v5.5.9 
* https://github.com/hapifhir/org.hl7.fhir.core/issues/623
* add explicit control over the User-Agent header, and make sure header…
* #328 - wrong processing of markdown URLs
* test fixes for URL handling
* fix tests
* improved validation of UUIDs
***NO_CI***
 2021-10-29 21:12:02 +00:00
Grahame Grieve 1c65a9b261
Gg 202110 validation various (#634) 
* add explicit control over the User-Agent header, and make sure headers flow through properly to all calls

* #328 - wrong processing of markdown URLs

* test fixes for URL handling

* fix tests

* improved validation of UUIDs

* fix test case dependency

* Add Dicom Package builder
 2021-10-29 16:26:50 -04:00
Grahame Grieve 6131eddb62 test fixes for URL handling 2021-10-29 09:19:38 +11:00
Grahame Grieve 53c5211033 Merge branch 'master' of https://github.com/hapifhir/org.hl7.fhir.core 2021-10-29 09:19:11 +11:00
Grahame Grieve 4743f606d0 #328 - wrong processing of markdown URLs 2021-10-27 10:02:03 +11:00
Grahame Grieve 5b9736dbff add explicit control over the User-Agent header, and make sure headers flow through properly to all calls 2021-10-23 05:56:36 +11:00
markiantorno 6f32a85d66 Updating version to: 5.5.9-SNAPSHOT and incrementing test cases dependency. 2021-10-22 01:16:56 +00:00
markiantorno 7254337c5b Release: v5.5.8 
* add -output-style parameter
* handle naming system URLs when resolving URLs
* fix profile comparison
* fix tests dependency
* ping build
* more validation for canonical URLs
* fix terminology version management and caching + better error message… …
* Merge pull request #620 from EricLemieux/fix-618 …
* fix json issue, and add tests for it
* Fix Issue 618 | NPE bundle validation …
* Removing pinentry option for gpg as it breaks in ubuntu 20.04
***NO_CI***
 2021-10-22 00:52:33 +00:00
Grahame Grieve e62f3a3c6c handle naming system URLs when resolving URLs 2021-10-21 07:02:48 +11:00
Grahame Grieve b60afcb608 fix profile comparison 2021-10-21 06:18:17 +11:00
Grahame Grieve 4cdead6f80 more validation for canonical URLs 2021-10-20 17:06:59 +11:00
Grahame Grieve e21a9830b8 fix terminology version management and caching + better error messages for extension context 2021-10-19 12:47:37 +11:00
Grahame Grieve f120a617c2 fix json issue, and add tests for it 2021-10-13 08:10:27 +11:00
markiantorno 28bdc66c64 Updating version to: 5.5.8-SNAPSHOT and incrementing test cases dependency. 2021-10-10 23:07:21 +00:00
markiantorno f450904bdb Release: v5.5.7 
* NPE fixes
* Smart Health Cards support in validator
* Fix bug generating spreadsheets due to sheet name length limitations
* Implement descendent-of filter
* more NPE fixes
* add Element.removeChild
* fix issue generation snapshot and content reference, and work around …
* improve SHC validation error
* fix for NPE generating ConceptMap spreadsheet
* fix crash in IG publisher rendering illegal content
* Improve slicing error messages
* more improving error message resolving slicing
* add missing code + track prohibited / required elements (improve rend…
* fix for broken links in R4B IGs
* fix bug related to logger in FHIRToolingClient
* fix bug related to logger in context
* enable detection of whether tx server knows about value set and bette…
* make likely source URL visible outside ProfileUtilities
* fix renderers - don't make nonvalid URLs into html links + fix NPE +
* fix bug with sheetnames generating spreadsheets
* supper branches in current version of packages
* report slicing information automatically where slicing is based on pr…
* fix misleading validation message + add -ips parameter for validator
* hint not warning when it's an example questionnaire
***NO_CI***
 2021-10-10 22:40:40 +00:00
Grahame Grieve 237897965b
Gg 202110 misc validation (#617) 
* NPE fixes

* Smart Health Cards support in validator

* Fix bug generating spreadsheets due to sheet name length limitations

* Implement descendent-of filter

* more NPE fixes

* add Element.removeChild

* fix issue generation snapshot and content reference, and work around old erroneous binding description in R4

* improve SHC validation error

* fix for NPE generating ConceptMap spreadsheet

* fix crash in IG publisher rendering illegal content

* Improve slicing error messages

* more improving error message resolving slicing

* add missing code + track prohibited / required elements (improve rendering of IGs)

* fix for broken links in R4B IGs

* fix bug related to logger in FHIRToolingClient

* fix bug related to logger in context

* enable detection of whether tx server knows about value set and better track returned errors from tx server

* make likely source URL visible outside ProfileUtilities

* fix renderers - don't make nonvalid URLs into html links + fix NPE +

* fix bug with sheetnames generating spreadsheets

* supper branches in current version of packages

* report slicing information automatically where slicing is based on profile + fix shc support + support codesystem-properties-mode + fix value set validation on profiles + fix wrong entry point on vaildating contained resources with profiles

* fix misleading validation message + add -ips parameter for validator

* hint not warning when it's an example questionnaire
 2021-10-10 17:37:02 -04:00
markiantorno df724155e0 Updating version to: 5.5.7-SNAPSHOT and incrementing test cases dependency. 2021-10-09 22:05:18 +00:00
markiantorno 04ceca78b1 Release: v5.5.6 
* incrementing test case dependency
***NO_CI***
 2021-10-09 21:34:22 +00:00
markiantorno c33a3b5e82 forgot to change module versions 2021-10-08 13:31:53 -04:00
Lukas Schmierer 6bf58e678e change import comment to be compatible with graphql-tools 2021-10-04 16:06:07 +02:00
Lukas Schmierer 04a72c6e29 use ElementBaseInput instead of ElementBase for input types 2021-10-04 16:03:17 +02:00
Lukas Schmierer 98a99ec630 fix duplicate scalar "date" 2021-10-04 13:21:29 +02:00
Lukas Schmierer d67f7c9926 print correct type in json format comment 2021-10-04 13:11:55 +02:00
Lukas Schmierer 6981e75765 fix parameter scalars to be lowercase 2021-10-04 12:11:36 +02:00
markiantorno f0997bc0c0 Updating version to: 5.5.5-SNAPSHOT and incrementing test cases dependency. 2021-09-29 17:51:23 +00:00
markiantorno 6aaf495c85 Release: v5.5.4 
* https://github.com/hapifhir/org.hl7.fhir.core/issues/499
* https://github.com/hapifhir/org.hl7.fhir.core/issues/602
* https://github.com/hapifhir/org.hl7.fhir.core/issues/611
***NO_CI***
 2021-09-29 17:22:54 +00:00
Grahame Grieve 342d75b2df
Gg 202109 misc snapshot (#610) 
* NPE fixes

* Smart Health Cards support in validator

* Fix bug generating spreadsheets due to sheet name length limitations

* Implement descendent-of filter

* more NPE fixes

* add Element.removeChild

* fix issue generation snapshot and content reference, and work around old erroneous binding description in R4

* improve SHC validation error

* fix for NPE generating ConceptMap spreadsheet

* fix crash in IG publisher rendering illegal content

* Improve slicing error messages

* more improving error message resolving slicing

* add missing code + track prohibited / required elements (improve rendering of IGs)

* fix for broken links in R4B IGs
 2021-09-29 10:29:10 -04:00
Mark Iantorno 72b7300700
Adding blank case for ExpressionNode.toString() in r4 and r5. (#609) 2021-09-27 14:52:55 -04:00
Mark Iantorno ad18e131d8
Issue 602 (#607) 
* r5 changes

* r4 changes

* dstu3 changes

* dstu2 changes

* updating release notes
 2021-09-27 14:04:59 -04:00
markiantorno 3db881a93b Updating version to: 5.5.4-SNAPSHOT and incrementing test cases dependency. 2021-09-10 03:27:13 +00:00
markiantorno 6b479d16cd Release: v5.5.3 
* Adding option to modify headers for http tx requests
***NO_CI***
 2021-09-10 02:57:44 +00:00
markiantorno 9b37e0fdc2 bumping version because github deploy failed 2021-09-09 22:38:51 -04:00
markiantorno f72d115f0f Release: v5.5.2 
* Adding option to modify headers for http tx requests
***NO_CI***
 2021-09-10 01:57:53 +00:00
Grahame Grieve 8a1e93b849 Merge branch 'master' of https://github.com/hapifhir/org.hl7.fhir.core 2021-09-10 06:51:35 +10:00