dotasek
b50aec5912
Advisory fix 1 ( #1089 )
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* Update cache and comparison downloads to use https
* Zip Slip tests and fix
* Zip Slip tests 2 and fix
* Add missing tempDir child in ScannerTest
* Add win format zip test
* Add tests to r4b
* Add tests and fixes for slips in tgz processing
* Update fhir-test-cases version
2023-01-20 16:56:57 -05:00
Grahame Grieve
f8e6371e1f
Merge branch 'master' into gg-202301-sm-errors
2023-01-20 19:44:24 +11:00
dotasek
f58b7acfb5
Swaps isBase64 with internal implementation for Android compatibility ( #1079 )
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* Adding animal sniffer to display all issues related to android compatibility.
* Duplicate isBase64 internally
Co-authored-by: Vitor Pamplona <vitor@vitorpamplona.com>
Co-authored-by: dotasek <david.otasek@smilecdr.com>
2023-01-18 18:40:24 -05:00
Grahame Grieve
26027fa3d6
update FHIRPath implementation for discussion at 84a07a6a92
2023-01-19 06:59:45 +11:00
Grahame Grieve
7b99037199
fix BOM in java files
2023-01-17 12:49:14 +11:00
Grahame Grieve
01c131b29d
see PR 1075 - fix issue with setProperty() ignoring extensions
2023-01-17 11:22:42 +11:00
Grahame Grieve
6c2a488402
fix type convertors to handle null
2023-01-16 10:12:59 +11:00
Grahame Grieve
b894cc6da7
Merge pull request #1048 from qligier/pr-fix-text-appending
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Fix appending text in ProfileUtilities
2022-12-31 09:10:24 +11:00
Grahame Grieve
9959183017
more work on PEDefinition
2022-12-26 13:28:22 +13:00
Quentin Ligier
858c06f097
Fix appending text in ProfileUtilities
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If the base text was null, appending a text in the derived element (using "...") would show a "null" before the text. This commit adds the method Utilities.appendDerivedTextToBase() to implement to correct behavior.
2022-12-23 18:52:47 +01:00
Grahame Grieve
49f798de48
Consistency around rendering comments in examples in IGs
2022-11-26 22:24:17 -03:00
Grahame Grieve
80f275ff18
upgrade to new JSON parser
2022-11-24 17:57:46 -03:00
Grahame Grieve
8136b00c86
work on loading speed for validator
2022-11-21 18:46:47 -03:00
Grahame Grieve
8e3833f58a
Fix broken LOINC link
2022-11-19 03:39:35 -03:00
Grahame Grieve
b4d21b8263
Merge pull request #994 from hapifhir/gg-202211-xhtml-entities
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Gg 202211 xhtml entities
2022-11-17 16:57:04 -03:00
Grahame Grieve
28d107b4ae
Validate XHTML entities in XML
2022-11-17 15:21:17 -03:00
dotasek
82972d5216
Add https-proxy param + fix proxy authorization header ( #888 )
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Co-authored-by: dotasek <david.otasek@smilecdr.com>
2022-11-17 11:27:21 -05:00
Grahame Grieve
cb72792b7e
More work on R4 <-> R4B guides
2022-11-14 18:03:22 +11:00
dotasek
11c369ea09
Remove all _PLURAL labels from constants
2022-11-07 16:52:47 -05:00
dotasek
183f9ecfd2
Remove _PLURAL labels from keys
2022-11-07 16:39:40 -05:00
dotasek
ffec2ce1c5
Merge remote-tracking branch 'origin/master' into do-i18n-plurals
2022-11-07 09:23:36 -05:00
Grahame Grieve
d19ff2e1f6
Merge pull request #972 from hapifhir/do-terminology-cache-filewpipechar
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Fix pipes in terminologyCache files
2022-11-06 07:04:58 +11:00
Grahame Grieve
c01d434b33
fix SDC rendering issue for R4B
2022-11-05 15:55:27 +11:00
Grahame Grieve
305f93ca26
Fix broken SDC links in Q & QR rendering
2022-11-05 11:30:27 +11:00
dotasek
14fdb713d9
Backport TerminologyCache changes to r4, r4b
2022-11-03 17:47:48 -04:00
dotasek
fc7cd56335
Merge remote-tracking branch 'origin/master' into do-i18n-plurals
2022-11-03 13:35:40 -04:00
Grahame Grieve
1ae7093eef
#934 Parameters object's getParameter(String theParameterName) is misnamed
2022-11-02 08:51:17 +11:00
dotasek
827d088732
More renaming
2022-10-28 16:43:38 -04:00
dotasek
2de6340cfa
Rename PL to Plural in method signatures
2022-10-28 14:44:09 -04:00
Grahame Grieve
cc38567c93
fix r4b test failure
2022-10-26 23:20:42 +11:00
Grahame Grieve
b187d289b6
fixes for plural messages for i18n
2022-10-26 14:30:25 +11:00
Grahame Grieve
56e8774c8f
Fix problem with R4B FHIRPath tests
2022-10-07 09:20:34 +11:00
Grahame Grieve
b9036524d5
R5 FHIRPath engine fixes for polymorphism + update R4B FHIRPath engine to match R5
2022-10-07 08:08:04 +11:00
dotasek
eabf51938b
Remove CapabilityStatement2 from reported and checked resource names ( #935 )
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* Remove CapabilityStatement2 from reported and checked resource names
* Update RELEASE_NOTES.md
***NO_CI***
Co-authored-by: dotasek <david.otasek@smilecdr.com>
2022-09-30 13:10:51 -04:00
dotasek
c51f7c2327
Enhanced testing for character encoding issues ( #928 )
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* Redo pull pipeline to check for alternate file encodings
* Fix jdkVersion references in pull-request-pipeline
* Failing test for Cp1252 encoded Java environments
* Fix file encoding mistake
* Add fix + refactor test
* Backport ParserBase changes and tests to previous versions
* And I mean it, this time
* Update tx cache resources
Co-authored-by: dotasek <david.otasek@smilecdr.com>
2022-09-23 10:38:10 -04:00
Grahame Grieve
df0bc26d47
rationalise extensions
2022-09-17 14:54:20 -04:00
Grahame Grieve
ccc38e48df
Fix NPE processing constraints without keys + fix for R5 terminology package problem
2022-09-16 23:49:26 -04:00
Grahame Grieve
f4aed6f2a2
Fix bug in RDF generation in R4B
2022-09-15 08:58:52 +02:00
Grahame Grieve
35233ee1e5
R5 updates for IG publisher
2022-09-15 08:41:37 +02:00
Grahame Grieve
4cbbce4ec8
img conformance in xhtml
2022-09-08 22:22:17 +10:00
Grahame Grieve
7dd2f3edf6
r4b snapshot tests
2022-09-07 21:56:24 +10:00
Grahame Grieve
f30f3e9ca9
fix failing rendering test
2022-09-07 11:12:57 +10:00
Grahame Grieve
44aeaa1a80
R4b Narrative tests fix up
2022-09-07 08:10:51 +10:00
Grahame Grieve
4dde247466
fix npe in narrative generation (r4b)
2022-09-07 08:10:39 +10:00
Grahame Grieve
5220f2552b
Merge remote-tracking branch 'origin/master'
2022-08-26 21:18:44 +10:00
Grahame Grieve
1c29587015
fixed
2022-08-26 21:18:39 +10:00
Grahame Grieve
ac9a1fc2c7
Merge pull request #903 from hapifhir/do-datetimetype-gregorian-zero
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Fix DateTimeType inconsistencies when using field setting
2022-08-26 06:43:03 +10:00
dotasek
e79b2bf199
Return lists for FHIRPath constants in r4 ( #902 )
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* Test for r5
* Test for r4b
* r4 test + fix
Co-authored-by: dotasek <david.otasek@smilecdr.com>
2022-08-25 10:02:13 -04:00
dotasek
cc2ec05afe
Improve test
2022-08-24 15:24:45 -04:00
dotasek
5b1ac27b12
Fix
2022-08-24 14:54:08 -04:00
dotasek
f8d7aa755e
Failing tests
2022-08-24 14:53:56 -04:00
Grahame Grieve
84cb59683c
r4b changes for r5
2022-08-10 22:22:50 +10:00
jamesagnew
056e41d19d
Add Reference.resource to output of copy().
2022-08-09 11:23:23 -04:00
Grahame Grieve
1aab88f6a7
migrate r5 changes to r4b
2022-08-09 22:29:59 +10:00
Grahame Grieve
1ac49bdce2
Add R4B / R5 Conversions
2022-07-28 21:30:12 +10:00
Grahame Grieve
780be4096a
fix rendering note - more informative
2022-07-28 21:29:33 +10:00
Grahame Grieve
b9d86aa5af
fix classes that inherit from BackboneType in R4B
2022-07-28 21:29:02 +10:00
Grahame Grieve
cc35c23c7d
fixes to validator for FHIRPath engine fixes
2022-07-28 08:48:33 +10:00
James Agnew
f010804e44
Rework precision checking in datetime ( #874 )
2022-07-25 16:40:55 -04:00
Grahame Grieve
5284773527
fix up version annotations
2022-07-22 14:27:26 +10:00
Grahame Grieve
ba7b0d8bfa
reduce text logging running tests
2022-06-24 13:15:55 +02:00
dotasek
0ecba5bf2a
Fix validation message for toCalendarZulu day validation
2022-06-20 09:26:11 -04:00
dotasek
1fee28fe84
Feature - run JUnit tests from validator_cli ( #835 )
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* WIP add initial test running code
* Importing test modules fix breaking tests 1
* Clean up pom dependencies, move execution before context load
* Re-org and document cli pom
* Set more dependencies to compile. Print entries in classpath
* Try running via internal Executors
* Clearer class names + provide clear output
* Clean up test summarys and output + update class regex to junit default
* Refactor to avoid having to extend class
* Trim down dependency additions in pom + javadoc
* Add the rest of the modules to TestExecutor
* Parse additional params for classname filter and module
* Add experimental JUnit 4 runner in case JUnit 5 hates us.
* Include JUnit4 tests via adapters. Need to refactor for better naming.
* Update LoadIgTests to JUnit 5
* Gentle refactor, print execution time
* Remove unnecessary interface, organize packages
* Remove cached resources (need to fix this)
* Allow setting of txCache globally for tests + fix r5 tests
* Mild refactor of TestExecutor + Reorder test execution
* Add fhirTestCasesDirectory to testConfig + get r4 tests working
* Add dstu2016may and dstu3 tests
* Add dstu2 tests
* Add convertors tests
* Refactor resourceNameForFile + don't copy existing files
* Get all txCache directories centrally and allow all to live in same dir
* Start extracting txCache resources
* Finish extracting txCache resources
* Fix failing GraphQLEngineTest
* Try an mvn install for the pull pipeline
* Clean and refactor
* Test coverage
* Fix GraphQLEngineTests for local jar run
* More refactoring, more tests
* Add bare test for TxCacheResourceExtractor
Co-authored-by: dotasek <david.otasek@smilecdr.com>
2022-06-14 17:04:00 -04:00
Grahame Grieve
dd7c607155
Regenerate R4B
2022-06-13 21:40:33 +03:00
Grahame Grieve
b0dfc9f281
fix bug counting children + fix issue with automatic string conversion in FHIRPath + fix bug in HTTP client + fix bug rendering profile comparison
2022-06-08 08:56:46 +10:00
dotasek
a435beb29c
Backport ProfileUtilities changes from r5 to r4b ( #827 )
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Plus update fhir-test-cases version
Co-authored-by: dotasek <david.otasek@smilecdr.com>
2022-06-02 09:30:43 -04:00
Grahame Grieve
4cc0a8dfba
Add support for 4.3.0
2022-05-27 22:17:32 +10:00
Grahame Grieve
919d6e6d8b
extend FHIRPath to support lowBoundary(), highBoundary() and precision()
2022-05-14 00:19:08 +10:00
dotasek
8a8bbb7308
Add tests for evaluate transforms using json StructureMap ( #807 )
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* Add tests for evaluate transforms using json StructureMap
Fixes issues/802
* Reduce test chatter, fix missing ',' in EVALUATE render
Co-authored-by: dotasek <david.otasek@smilecdr.com>
2022-05-11 12:52:47 -04:00
Grahame Grieve
4b1b99a61c
r4b changes to match r5
2022-05-11 02:48:22 +10:00
dotasek
1645982389
Fix for issues/766 - reverse references with _history in GraphQL ( #790 )
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* Create and use getIdPart
* Add tests and changes for dstu3, r4, r4b, and r5
* Update get/set Id javadoc
Co-authored-by: dotasek <david.otasek@smilecdr.com>
2022-04-22 18:06:24 -04:00
Grahame Grieve
8c610c1a01
Regenerate R4B code
2022-04-22 11:56:24 +10:00
Grahame Grieve
fa92f85f3c
Merge remote-tracking branch 'origin/master'
2022-04-22 07:36:53 +10:00
Grahame Grieve
10f2325e19
R4B quality fixes
2022-04-22 07:36:28 +10:00
Grahame Grieve
c58516ce44
remove references to c:\temp
2022-04-20 09:59:30 +10:00
dotasek
4d9bb2c76a
Fix generated temp file that breaks git pulls for windows ( #788 )
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Co-authored-by: dotasek <david.otasek@smilecdr.com>
2022-04-14 12:52:59 -04:00
Grahame Grieve
b9902833c5
Merge branch 'master' of https://github.com/hapifhir/org.hl7.fhir
2022-04-12 09:12:35 +10:00
Grahame Grieve
4927d23273
Add integrityt check utils for R4B integrity
2022-04-12 09:10:23 +10:00
dotasek
a8da416ee3
Fix xml test + add unit tests
2022-04-11 14:57:10 -04:00
dotasek
2181cb14d5
Change tests to xml + fix breaking test
2022-04-11 14:10:53 -04:00
Grahame Grieve
404b4d4f79
fix r4b snapshot generation
2022-04-05 16:26:33 +10:00
dotasek
d0feacaaa8
Add tests and changes for Decimal
2022-03-17 15:41:07 -04:00
dotasek
b5b43836eb
Add tests and changes for Base64Binary
2022-03-16 12:20:58 -04:00
dotasek
9903d15ecc
Add tests for setValueAsString and contructor precision checking
2022-03-15 17:47:23 -04:00
dotasek
1a7e076479
Move precision checking code to setValueAsString
2022-03-15 16:49:51 -04:00
Grahame Grieve
ef3aee75f1
make fhir version code case independent
2022-03-11 10:37:28 +11:00
Grahame Grieve
3f9d651b9b
updates for r5 changes
2022-03-11 06:43:12 +11:00
Grahame Grieve
a34c33c0c0
=fix r4b tests
2022-03-10 07:43:01 +11:00
Grahame Grieve
e36e1d2973
fix list issues #722
2022-02-14 09:15:30 +11:00
Grahame Grieve
2a8dbcf8a4
fix r4b compile problem
2022-02-12 11:00:41 +11:00
Grahame Grieve
96538ba249
Merge pull request #704 from lmckenzi/Add_map_compile
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Add map compile
2022-02-01 11:50:41 +11:00
Grahame Grieve
cae92c8621
Merge pull request #727 from hapifhir/ja_20220130_graphql_cleanup
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Updates to GraphQL
2022-02-01 11:49:10 +11:00
Grahame Grieve
54f280437f
fix bug in tests
2022-02-01 10:46:14 +11:00
dotasek
99650f041b
Fix DateTime formatting in r4b tests
2022-01-31 10:45:28 -05:00
jamesagnew
846866472b
Updates to GraphQL
2022-01-30 17:04:10 -05:00
dotasek
bd74bf3cee
Fix typos
2022-01-14 14:53:36 -05:00
Grahame Grieve
5313706a9a
fix compile problems
2022-01-14 06:24:46 +11:00
Grahame Grieve
554a458b57
fix up logging problem
2022-01-13 17:38:39 +11:00
Grahame Grieve
d5e98dbf94
fix snapshot build
2022-01-10 23:03:35 +11:00
Grahame Grieve
c627ec43d9
Add R4B code + update generator for R4B generation
2022-01-01 16:33:10 +11:00