b402fd1c45
Fix bug handling filter, and refactor terminology code
2023-05-05 13:55:23 -05:00
806c065fcb
fix version return + profile support in testing
2023-05-04 10:01:35 +10:00
33694d9e2b
133: Improve regex and tests to escape just embedded HTML tags, not autolinks in Markdown
2023-05-03 16:48:47 +02:00
07c95455a4
#133 : Escape just embedded HTML tags, not autolinks in Markdown
2023-05-02 20:40:49 +02:00
43ef45813b
Improvements to StructureMap validation use with profiles (+ fix various bugs)
2023-05-01 18:10:05 +10:00
7f8817295b
Fix NPE
2023-05-01 18:09:26 +10:00
7b5aceb722
Language improvements for Lang Packs
2023-05-01 18:09:15 +10:00
28b21d566a
Fix up error messages
2023-04-28 18:56:00 +10:00
d60db32e37
more quote fixing
2023-04-28 17:50:13 +10:00
f9121a51c9
Merge branch 'master' into gg-202304-extension-validation
2023-04-28 17:47:11 +10:00
d021a9dc7f
Merge branch 'hapifhir:master' into master
2023-04-28 09:39:54 +02:00
b4870b0a6b
Updated Dutch according to Messages.properties
2023-04-28 09:38:53 +02:00
9a165b75d4
Fixed some more typos
2023-04-28 09:31:09 +02:00
069dc03c90
Validate Extension Context + fix questionnaire value set validation
2023-04-28 17:28:28 +10:00
07a08f5de2
Fixed two typos
2023-04-28 08:51:30 +02:00
53eae9b51f
fix error messages
2023-04-28 10:14:17 +10:00
6e2b113f94
improved error message
2023-04-28 07:36:39 +10:00
789eae760e
Merge pull request #1236 from ahenket/patch-1
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Fixed missing = in key "QUESTIONNAIRE_QR_ITEM_BADOPTION_CS"
2023-04-28 06:33:00 +10:00
de75e4db52
Fixed missing = in key "QUESTIONNAIRE_QR_ITEM_BADOPTION_CS"
2023-04-27 17:50:43 +02:00
07a2e63941
more http logging to subdirectory of temp
2023-04-27 20:09:23 +10:00
3ed7813973
language translations support in validator
2023-04-25 21:51:31 +10:00
b6b4fbcd0c
more tx test fixes
2023-04-24 23:08:29 +10:00
907126703f
fix default server settings
2023-04-22 18:55:56 +08:00
1498823d5f
fix error processing nucc locally
2023-04-21 18:53:03 +08:00
fe86ab1d7c
reorg server settings
2023-04-21 18:52:36 +08:00
580079f26d
allow to prohibit network access from within code
2023-04-21 12:25:54 +08:00
9b4b1ae2cc
Add -fhir-settings param to Validator CLI ( #1203 )
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* Start work
* Tests for new Param
* More tests, add param, refactor
* Rename + JsonProperty annotations
* Logging for API keys
* WIP rename search parameter + add settings object for serialization
* Switch to JSON based settings file.
* Rename FHIRSettings and remove ToolGlobalSettings
* Update default path for settings file + expand test
* Only allow single instantiation with explicitFilePath
* Move and expand tests
* Fix failing test
* Add test for FhirSettings param precedence
* Refactor to only call getInstance() internally in FhirSettings
2023-04-19 17:18:29 -04:00
5ec1bd9f67
fix npe
2023-04-18 09:51:23 +08:00
cc8c7be307
fix which servers tests are based on
2023-04-18 09:41:15 +08:00
02bd1d8ce7
more fixing for language handling issues
2023-04-18 09:40:49 +08:00
81d26c5160
work on no-network-access mode
2023-04-18 09:39:59 +08:00
f1d5676425
run txTests from validator
2023-04-16 21:56:41 +10:00
48e86fa905
fix failing tests
2023-04-14 22:39:48 +10:00
6ac00b8c68
rework terminology interface
2023-04-14 17:59:06 +10:00
03eb6e7bf0
more work doing terminology server testing
2023-04-08 15:06:51 +10:00
548284fcda
rework language handling again
2023-04-02 23:08:17 +10:00
0bbff8d14d
rework package cache manager - add testing mode
2023-04-02 23:06:29 +10:00
981d233827
fix index error validating HierarchicalTable
2023-04-01 07:34:14 +11:00
7ef17d41d6
warning not error when the code system isn't known validating questionnaire answer options
2023-04-01 07:33:56 +11:00
e59c83855d
Defining the existence of R6
2023-04-01 07:32:02 +11:00
e18cfcf0f8
Add reading translations
2023-03-30 23:30:53 +11:00
1b6137967f
i18n framework for HTML generation in renderers - step #1
2023-03-30 10:16:51 +11:00
12de53f336
Work on language translations
2023-03-30 06:32:10 +11:00
bbdb3dea89
undo dependency on test case packages (memory reasons)
2023-03-29 17:10:38 +11:00
d7817c785a
XML utils - add tag
2023-03-29 15:06:59 +11:00
520d13ab51
fix R5 path for spec
2023-03-29 15:06:35 +11:00
0233e48a1c
suppress prism if ttl source is too big
2023-03-29 15:06:24 +11:00
9460f1f64b
Merge pull request #1183 from hapifhir/do-20230315-pathbuilder
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Give finer grained control over path building with dedicated PathBuilder class
2023-03-28 05:47:26 +11:00
3044a188d9
Add PathBuilder documentation clean up code.
2023-03-27 10:41:44 -04:00
7bf243f593
Merge pull request #1188 from hapifhir/gg-202303-ftp-windows
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Fix FTP problem on windows
2023-03-24 22:20:05 +11:00
ac64a6bbd7
Fix FTP problem on windows
2023-03-24 21:13:54 +11:00
37206a1f30
Merge pull request #1187 from hapifhir/gg-202303-r5-final-gen
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Gg 202303 r5 final gen
2023-03-24 11:50:23 +11:00
b8777319da
update tests to use R5 package from test case repo everywhere
2023-03-24 10:18:42 +11:00
d16e6d3249
Merge pull request #1184 from hapifhir/gg-202303-r5-final-gen
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Gg 202303 r5 final gen
2023-03-23 21:42:19 +11:00
b5c48d1934
rebuild .index.json if it's empty
2023-03-23 20:49:55 +11:00
f122dc164f
update code for R5 final
2023-03-23 20:48:38 +11:00
36dce28691
Make getter for remote separator
2023-03-22 17:31:40 -04:00
8ce7cd8323
Merge remote-tracking branch 'origin/master' into do-20230315-pathbuilder
2023-03-22 12:09:56 -04:00
6173d77a24
Merge pull request #1181 from hapifhir/gg-202303-vs-example-urls
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Gg 202303 vs example urls
2023-03-22 23:56:01 +11:00
74a69de992
validate example URLs in value sets correctly
2023-03-22 23:06:33 +11:00
05a367b088
validate example URLs in value sets correctly
2023-03-22 23:06:06 +11:00
1442f1609c
Stop re-initializing file type and mode with each upload ( #1178 )
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* Stop re-initializing file type and mode with each upload
* Methods for setting up buffer size
2023-03-21 15:36:19 -04:00
f796ffc57f
fix issues with help16.png
2023-03-21 18:21:42 +11:00
c053ed9c6e
suppress data attributes in XHTML
2023-03-21 17:27:14 +11:00
5444c3a33a
Inline help6.png in resources
2023-03-21 17:26:51 +11:00
7ea1e5197d
Fix OS issue with zipslip protection
2023-03-21 06:14:01 +11:00
7a85bc00c9
Merge branch 'master' into do-20230315-pathbuilder
2023-03-20 11:38:53 -04:00
e1fed0a8eb
Merge remote-tracking branch 'origin/master'
2023-03-19 08:52:55 +11:00
95f3fdd187
Add file: to URL scheme list
2023-03-19 08:52:49 +11:00
cbf864b1b9
Refactor FTPClient to perform fewer directory creates ( #1159 )
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* Refactor FTPClient to perform fewer directory creates
* Restore old main
* More lenient test for delete timing (delete is fast)
* More timing leniency
* Add more checks for command completion, switch time track to nanos
* Logging logging logging
2023-03-16 14:53:59 -04:00
cf9bd54a74
fix bug in XhtmlNode
2023-03-16 15:42:04 +11:00
413cbb115a
fix issues with R3R4MapTester
2023-03-16 14:08:00 +11:00
27598a382d
Fix issues with xhtml handling
2023-03-16 14:07:11 +11:00
19cb639d37
refactor how types are handled loading packages
2023-03-16 13:26:34 +11:00
0ae4aa9a0f
Start pathbuilder work
2023-03-15 16:20:51 -04:00
6be0becc61
fix for NPE
2023-03-14 21:28:37 +11:00
a45de03431
add tail() to Utilities
2023-03-13 13:53:41 +11:00
96f265653e
fix run time test
2023-03-12 23:02:46 +11:00
957e9fe7cc
Load all types not no types from Npm Package when no types are specified
2023-03-11 18:54:23 +11:00
10d560c859
Add support for locally processed special case code systems (and an example - rgb)
2023-03-10 21:28:08 +11:00
1212b85b5e
Change from Error to FHIRException when wrong value type is wrong on polymorphic element
2023-03-10 16:12:59 +11:00
cedadbcbe7
Convenience method for unchecked read only use of Utilities.path ( #1164 )
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* Convenience method for unchecked read only use of Utilities.path
* Restore remove first null behaviour
* Method rename and update JavaDoc
2023-03-09 22:08:41 -05:00
909f7e64fe
Additional zip-slip tests ( #1162 )
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* Additional zip-slip tests
* Fix windows path test
2023-03-09 14:30:53 -05:00
95813d9004
Fix FML Comments parsing, and add StructureMap rendering to pretty FML
2023-03-09 19:44:57 +11:00
187d3e98c7
More fixes for structure map validation
2023-03-09 09:11:31 +11:00
53e67bc1cb
handle re-use of mapping groups when validating maps
2023-03-08 09:11:24 +11:00
26eb1311a4
release notes
2023-03-07 23:33:35 +11:00
6bf26255ab
fix structure map validation issues around type
2023-03-07 20:58:51 +11:00
58a933094f
fix json escaping
2023-03-07 06:30:01 +11:00
0c26f09721
revise whitespace handling for unicode conformance in validator
2023-03-07 06:25:45 +11:00
5eca02f879
bug fixes
2023-03-06 23:33:38 +11:00
6559c4b245
improve SM validation message
2023-03-06 20:45:05 +11:00
507ff74c23
recognise R4B and R5 core packages
2023-03-06 20:44:41 +11:00
adafa7eec8
Improve Specification Difference Engine
2023-03-06 16:55:02 +11:00
36d22c522a
make xhtml nodes use less memory
2023-03-06 10:32:54 +11:00
356e500ab6
finish ConceptMap validation
2023-03-05 23:25:12 +11:00
ec72b1fcdd
fix parsing and validating of concept maps in structure maps + validate terminology part of structure maps
2023-03-05 18:29:11 +11:00
c42da7af68
more package hacking work
2023-03-05 06:14:22 +11:00
52c97f3c70
test primitive regexes if other tests pass
2023-03-05 06:14:07 +11:00
99d2421014
fix using wrong version of extensions package
2023-03-02 08:49:22 +11:00
31b770db8a
ping build
2023-03-02 07:36:10 +11:00
abba72d099
Fix bug in CommaSeparatedStringBuilder
2023-03-01 21:48:43 +11:00
4c30621491
structuremap validation and invariant fixes for forthcoming R5 release
2023-02-27 18:32:38 +11:00
2bd73c650e
Work on StructureMap validation
2023-02-27 07:30:04 +11:00
d3a407e369
FML validation
2023-02-25 14:05:03 +11:00
521e72a5ff
Merge pull request #1110 from balhoff/rdf-wg-r5-with-generated
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Implement R5 RDF format changes
2023-02-24 10:21:19 +11:00
1eeee429ce
More markdown detection work
2023-02-21 16:52:32 +11:00
3eda8580fc
fix rendering for conditional references
2023-02-21 16:46:02 +11:00
76a3129b30
fix validation of conditional references
2023-02-20 23:48:16 +11:00
455d2774da
remove reference to package-client folder
2023-02-20 10:44:11 +11:00
38a55d261d
update table generator to suppress external links in base row and column
2023-02-18 15:13:13 +11:00
fecf024952
FHIR-40387 Improve guidance for markdown datatype
2023-02-16 13:03:37 +11:00
3011b37df4
fix bugs in XHTML parser (common entities)
2023-02-16 10:07:18 +11:00
c3580528bb
Fix Turtle syntax errors with multiline comments.
2023-02-15 09:58:25 -05:00
d1690a9416
Merge pull request #1101 from hapifhir/do-20230202-fix-jsonobject-instant-test
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Fix JsonObjectTests interaction with Instant
2023-02-15 08:31:58 +11:00
97772ada1e
Merge branch 'master' into rdf-wg-r5
2023-02-14 13:47:28 -05:00
33a84012f2
fix bug parsing html entities
2023-02-14 17:32:26 +11:00
d5d83bea9c
fix broken links in R5 builds
2023-02-14 09:53:22 +11:00
3a427385c5
FHIR QA driven changes
2023-02-12 17:53:41 +11:00
e6548bcccd
add unCamelCaseKeepCapitals
2023-02-09 17:39:47 +11:00
1d4f1e9d90
fix bug with duplicate value in getResourceNames()
2023-02-06 05:38:02 +11:00
7b3e206b1c
Fix JsonObjectTests interaction with Instant
2023-02-02 13:52:01 -05:00
5dc19cd052
Tweak spacing.
2023-02-01 11:55:11 -05:00
69ce2b45f2
Output lists in examples using RDF lists. Don’t output fhir:index.
2023-01-31 14:11:29 -05:00
08ed54fd35
Rework Package API to allow for authentication on package servers
2023-01-31 10:32:21 +11:00
4ab03c5c93
cater for "." in XML element and attribute names
2023-01-31 07:23:52 +11:00
cca38587ce
Cleanup jetbrains annotations ( #1090 )
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Co-authored-by: dotasek <david.otasek@smilecdr.com>
2023-01-23 18:27:47 -05:00
b50aec5912
Advisory fix 1 ( #1089 )
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* Update cache and comparison downloads to use https
* Zip Slip tests and fix
* Zip Slip tests 2 and fix
* Add missing tempDir child in ScannerTest
* Add win format zip test
* Add tests to r4b
* Add tests and fixes for slips in tgz processing
* Update fhir-test-cases version
2023-01-20 16:56:57 -05:00
f8e6371e1f
Merge branch 'master' into gg-202301-sm-errors
2023-01-20 19:44:24 +11:00
68b36d3cb5
go-publish related changes
2023-01-20 11:23:17 +11:00
f58b7acfb5
Swaps isBase64 with internal implementation for Android compatibility ( #1079 )
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* Adding animal sniffer to display all issues related to android compatibility.
* Duplicate isBase64 internally
Co-authored-by: Vitor Pamplona <vitor@vitorpamplona.com>
Co-authored-by: dotasek <david.otasek@smilecdr.com>
2023-01-18 18:40:24 -05:00
885e55352f
FTPClient: upload file path creation, logging, and improved default path ( #1078 )
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* More logging of errors.
* WIP create path for file to upload.
* WIP Tests
* More tests
* Improved logging and path fixes
* Clean up imports
* Rename test
* add testing code
Co-authored-by: dotasek <david.otasek@smilecdr.com>
Co-authored-by: Grahame Grieve <grahameg@gmail.ccom>
2023-01-18 12:42:59 -05:00
829cea8d33
Add check for slicing at the root of a profile
2023-01-17 11:41:42 +11:00
4b1a3dba46
Improve URN validation
2023-01-16 22:13:53 +11:00
a61d860ddb
FTP passive mode
2023-01-16 22:13:38 +11:00
615ed8d63f
Update R4 FHIRPath implementation from R5, and get all tests passing ( #1063 )
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* Update R4 FHIRPath implementation from R5, and get all tests passing
* test NPE in markdown processing
* go-publish support
* Start implementing loading structure maps with validation
* release notes
* more work on FTP
* Fix breaking test.
* Add fhir-test-cases to r4 pom to fix breaking test
Co-authored-by: Grahame Grieve <grahameg@gmail.ccom>
Co-authored-by: dotasek <david.otasek@smilecdr.com>
2023-01-13 23:08:40 -05:00
dc9d5d0ed1
Set file transfers to binary type, ensure file contents match
2023-01-11 13:41:43 -05:00
edf6d75551
Implement FTP Client ( #1064 )
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* Start with tests against fake FTP
* Dummy test file
* Switch to our FTPClient, make tests break
* Implement FTPClient
* Rely on end caller to set path delimiters
* User port 8021 for tests (not protected in azure pipelines)
* Let mocks use Windows filesystem
* Gentle refactor
Co-authored-by: dotasek <david.otasek@smilecdr.com>
2023-01-09 20:06:21 -05:00
e794eca959
Changes to support upgrades to IG publisher -go-publish process
2023-01-05 08:44:45 +11:00
19f1171962
json date handling related changes
2023-01-05 08:43:57 +11:00
673e36b989
Merge branch 'master' into rdf-wg-r5-merging
2023-01-04 15:04:48 -05:00
db48892b66
fix failing test
2023-01-03 14:57:08 +11:00
f3fc19a906
refactor profile generation (utils -> renderer) + add new views
2023-01-03 14:54:11 +11:00
b894cc6da7
Merge pull request #1048 from qligier/pr-fix-text-appending
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Fix appending text in ProfileUtilities
2022-12-31 09:10:24 +11:00
858c06f097
Fix appending text in ProfileUtilities
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If the base text was null, appending a text in the derived element (using "...") would show a "null" before the text. This commit adds the method Utilities.appendDerivedTextToBase() to implement to correct behavior.
2022-12-23 18:52:47 +01:00
37844bd395
update xver dependency
2022-12-17 08:07:43 +11:00
6b1ae35ef3
* Add validator support for fhir_comments in R2/R2B ( #1042 ) + Add validator checks around versions in extension URLs
2022-12-17 07:11:06 +11:00
8b7890bea2
removing caching package client - rests on invalid assumptions
2022-12-16 08:49:30 +11:00
9aeb39671b
fix to get tests passing again. If I'm lucky
2022-12-14 11:54:14 +11:00
72eae55218
fix new bug in package manager
2022-12-14 09:59:25 +11:00
e9d8400a78
fix package loading bug
2022-12-14 09:09:53 +11:00
d1d391496e
upgrade to new R5 release
2022-12-13 21:13:29 +11:00
f5d486f171
refactoring package-list.json handling
2022-12-12 19:54:37 +11:00
1786122763
Update org.hl7.fhir.utilities/src/main/resources/Messages.properties
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Co-authored-by: Vadim Peretokin <vperetokin@hey.com>
2022-12-09 23:30:59 +11:00
ee8a58b7e1
Update org.hl7.fhir.utilities/src/main/resources/Messages.properties
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Co-authored-by: Vadim Peretokin <vperetokin@hey.com>
2022-12-09 23:30:06 +11:00
7c2c44b333
Add Accept header fetching JSON
2022-12-09 20:09:12 +11:00
474f84c903
fix bug doing version comparison
2022-12-09 20:09:01 +11:00
771fb0ac00
Changes related to validation of document and message links
2022-12-09 11:09:17 +11:00
064c4ce896
Add contents to .index.json in package (per update to spec)
2022-12-06 16:21:56 +11:00
66f46bc319
remove test that shouldn't have been committed
2022-12-05 17:56:12 +11:00
b778641cf6
fix bug in XHTML generation
2022-12-05 17:27:52 +11:00
5d29a88552
fix npe appending slashes
2022-12-05 17:27:43 +11:00
a0c28f3326
Round trip XHTML faithfully wrt empty elements
2022-12-05 13:41:31 +11:00
cd8c970045
Add logging to package client
2022-12-01 16:56:55 +11:00
d24cc6c5ee
Merge remote-tracking branch 'origin/master'
2022-12-01 08:22:19 +11:00
fedfa88ffb
refactor resource reference resolution to use package dependencies whereever possible
2022-12-01 08:16:00 +11:00
d53aabe2e5
Do not delete previously undefined xmlns attributes when processing Xhtml nodes ( #985 )
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* Add tests
* Add back unseen namespace attributes
* Gentle refactor, document setOriginalNamespacePrefix
* Update validator_test_case_version
Co-authored-by: dotasek <david.otasek@smilecdr.com>
2022-11-30 16:01:28 -05:00
49f798de48
Consistency around rendering comments in examples in IGs
2022-11-26 22:24:17 -03:00
53fb08ab19
update JSON parser used by validator to JSON5 parser
2022-11-26 18:24:29 -03:00
363a95bb8a
more replacing json library
2022-11-25 22:37:43 -03:00
450fa1d02c
minor improvements to json library
2022-11-25 22:37:18 -03:00
61d998963a
fix debugging
2022-11-24 19:56:07 -03:00
618f98e323
Add spanish messages
2022-11-24 18:02:02 -03:00
1617315ed8
minor improvements to validator message
2022-11-24 17:58:15 -03:00
80f275ff18
upgrade to new JSON parser
2022-11-24 17:57:46 -03:00
b2e2c68f7e
minor typo fixes in validation messages
2022-11-22 12:45:33 -03:00
24331956f1
Add rule date to validation messages so new rules can be highlighted
2022-11-22 05:58:02 -03:00
8136b00c86
work on loading speed for validator
2022-11-21 18:46:47 -03:00
8e3833f58a
Fix broken LOINC link
2022-11-19 03:39:35 -03:00
28d107b4ae
Validate XHTML entities in XML
2022-11-17 15:21:17 -03:00
47443acaf3
prepare release
2022-11-16 18:36:02 -03:00
011e2488a3
New Json Parser
2022-11-16 15:11:33 -03:00
24656a20fa
typo fix in name
2022-11-15 18:13:45 +11:00
0f3e8be43b
Merge pull request #989 from vadi2/patch-1
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Fix missing space in slicing validation failure message
2022-11-15 17:49:32 +11:00
2de7220db4
Fix missing space in slicing validation failure message
2022-11-14 21:18:38 +01:00
cf7ef7218a
Merge pull request #979 from lmckenzi/NewIGHelp
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Change default help location for tables
2022-11-15 07:18:13 +11:00
231aae6043
Fix issue rendering resource by name
2022-11-14 18:04:27 +11:00
e01216b7f3
more xver package related changes
2022-11-11 12:29:45 +11:00
21b0577249
track hint about code validation
2022-11-10 05:16:10 +11:00
96218a5ce4
refactor resource narrative generation rules
2022-11-10 05:14:59 +11:00
a090055fd3
Merge branch 'master' into gg-202211-vs-errors
2022-11-08 09:47:07 +11:00
19e97c857b
Make references to canonical resources in error messages version specific
2022-11-08 09:37:26 +11:00
90f450ecb6
Rename method + remove dead code
2022-11-07 17:29:21 -05:00
11c369ea09
Remove all _PLURAL labels from constants
2022-11-07 16:52:47 -05:00
183f9ecfd2
Remove _PLURAL labels from keys
2022-11-07 16:39:40 -05:00
25c12a9e4e
Use plural phrase as placeholder for singular in de and nl
2022-11-07 15:20:31 -05:00
ffec2ce1c5
Merge remote-tracking branch 'origin/master' into do-i18n-plurals
2022-11-07 09:23:36 -05:00
90f3321c7d
Change default help location for tables
2022-11-05 17:07:38 -06:00
a6b167a94a
sync
2022-11-05 11:31:06 +11:00
fc7cd56335
Merge remote-tracking branch 'origin/master' into do-i18n-plurals
2022-11-03 13:35:40 -04:00
Grahame Grieve
Pieter Edelman
Grahame Grieve
Alexander Henket
dotasek
dotasek
Jim Balhoff
Quentin Ligier
Vadim Peretokin
Lloyd McKenzie