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215 Commits

Author SHA1 Message Date
Grahame Grieve 5313706a9a fix compile problems 2022-01-14 06:24:46 +11:00
Grahame Grieve 554a458b57 fix up logging problem 2022-01-13 17:38:39 +11:00
dotasek 36cc6defc2 Refactor with a mock + new test to catch exception 2022-01-06 10:10:45 -05:00
Paul Robson b785940a2b refactor: inline method 2021-12-22 12:58:35 -05:00
Paul Robson c80b7eae10 refactor: add display name to test 2021-12-22 11:54:19 -05:00
Paul Robson 9171c39d59 refactor: extract private helper methods 2021-12-22 11:53:24 -05:00
Paul Robson f941329fcc bug: check temporary variable hasn't been set yet 2021-12-22 11:50:43 -05:00
Paul Robson 369744488d test: check that coding is translated 2021-12-22 11:50:05 -05:00
Paul Robson 137592ecbf test: check that coding is translated 2021-12-22 11:47:23 -05:00
Grahame Grieve e4d3047138 #357: fix bug looking for contained resources inside bundles 2021-12-17 14:38:21 +11:00
Grahame Grieve 3118cdc132 Add support for new FHIR Versions 2021-12-17 12:08:40 +11:00
Grahame Grieve c15e60f2c6 main Build fixes: new version of FHIR (4.3.0) + transit to using release indicators in version + fix various build issues 2021-12-15 07:28:19 +11:00
markiantorno 444c8951c6 removing jetbrains annotations 2021-12-06 12:54:40 -05:00
Mark Iantorno 4d0692ff61
Validate contains (#669) 
* wip

* first go at this, still some failing tests

* post-pairing with Grahame

* wip

* failing test cases

* fixed InstanceValidator to respect new validation options for both references and contained resources

* removed dead code

* put copyright back in BaseValidator

* wip
 2021-11-25 15:52:29 -05:00
Grahame Grieve dbf8179b6d
Merge pull request #663 from hapifhir/gg-202111-cs-work 
Gg 202111 cs work
 2021-11-18 11:43:37 +11:00
Grahame Grieve bbac44fc52 reduce spurious logging 2021-11-18 08:09:43 +11:00
dotasek cccf1cebae
Update maven config and tests to allow Java 8, 11 and 17 builds (#653) 
* Updates to enable Java 8, 11, and 17 builds

* Set surefire args according to profile + update jacoco verison

* Add comments for surefire profile args.

* Temporarily skip failing test

* Object based parameters ***NO_CI***

* Cleanup skipped test, move new pipeline codo

* Update validator_test_case_version
 2021-11-16 09:26:53 -05:00
Grahame Grieve 5a33d5c15a merge conflicts + rework rendering + gather all HTTP access to SimpleHTTPClient + add TerminologyCacheManager 2021-11-09 16:24:21 +11:00
Grahame Grieve 1aae6c8c76 rework HTTP client - all client calls route through SimpleHTTPClient + define CommonPackages infrastructure 2021-11-09 11:38:25 +11:00
markiantorno 7bcd2b6434 Adding changes for logging request and resp 2021-11-08 16:10:04 -05:00
Grahame Grieve d91b26e69b Add getServerVersion to tooling client 2021-11-09 06:13:18 +11:00
Grahame Grieve c8c96e13fd
Merge pull request #615 from lschmierer/graphql_fixes 
Fix GraphQLSchemaGenerator to produce valid GraphQL schemas
 2021-11-03 11:26:45 +11:00
Grahame Grieve 1c65a9b261
Gg 202110 validation various (#634) 
* add explicit control over the User-Agent header, and make sure headers flow through properly to all calls

* #328 - wrong processing of markdown URLs

* test fixes for URL handling

* fix tests

* improved validation of UUIDs

* fix test case dependency

* Add Dicom Package builder
 2021-10-29 16:26:50 -04:00
Grahame Grieve 237897965b
Gg 202110 misc validation (#617) 
* NPE fixes

* Smart Health Cards support in validator

* Fix bug generating spreadsheets due to sheet name length limitations

* Implement descendent-of filter

* more NPE fixes

* add Element.removeChild

* fix issue generation snapshot and content reference, and work around old erroneous binding description in R4

* improve SHC validation error

* fix for NPE generating ConceptMap spreadsheet

* fix crash in IG publisher rendering illegal content

* Improve slicing error messages

* more improving error message resolving slicing

* add missing code + track prohibited / required elements (improve rendering of IGs)

* fix for broken links in R4B IGs

* fix bug related to logger in FHIRToolingClient

* fix bug related to logger in context

* enable detection of whether tx server knows about value set and better track returned errors from tx server

* make likely source URL visible outside ProfileUtilities

* fix renderers - don't make nonvalid URLs into html links + fix NPE +

* fix bug with sheetnames generating spreadsheets

* supper branches in current version of packages

* report slicing information automatically where slicing is based on profile + fix shc support + support codesystem-properties-mode + fix value set validation on profiles + fix wrong entry point on vaildating contained resources with profiles

* fix misleading validation message + add -ips parameter for validator

* hint not warning when it's an example questionnaire
 2021-10-10 17:37:02 -04:00
Lukas Schmierer 6bf58e678e change import comment to be compatible with graphql-tools 2021-10-04 16:06:07 +02:00
Lukas Schmierer 04a72c6e29 use ElementBaseInput instead of ElementBase for input types 2021-10-04 16:03:17 +02:00
Lukas Schmierer 98a99ec630 fix duplicate scalar "date" 2021-10-04 13:21:29 +02:00
Lukas Schmierer d67f7c9926 print correct type in json format comment 2021-10-04 13:11:55 +02:00
Lukas Schmierer 6981e75765 fix parameter scalars to be lowercase 2021-10-04 12:11:36 +02:00
katiesmilecdr 3b6a2c91cf
update ListResource profile in r4 (#612) 2021-09-29 12:38:13 -04:00
Mark Iantorno 72b7300700
Adding blank case for ExpressionNode.toString() in r4 and r5. (#609) 2021-09-27 14:52:55 -04:00
Mark Iantorno ad18e131d8
Issue 602 (#607) 
* r5 changes

* r4 changes

* dstu3 changes

* dstu2 changes

* updating release notes
 2021-09-27 14:04:59 -04:00
Mark Iantorno e5a05f5562
Terminology client headers (#599) 
* wip

* adding tests for headers in client

* fix

* r4 updated httpclient

* updating http client code for r4 and dstu3

* dunno why this didn't get added before
 2021-09-09 16:32:19 -04:00
Grahame Grieve b5723bab50
Merge branch 'master' into issue-555 2021-08-24 06:00:27 +10:00
jnmeijer 66b9e180e6
Improved performance of hashNWS (#570) (#573) 
Co-authored-by: Jonathan Meijer <jonathan.meijer@telus.com>
 2021-08-11 15:44:20 -04:00
Mark Iantorno a9abd8f824
https://github.com/hapifhir/org.hl7.fhir.core/issues/557 (#571) 2021-08-11 10:07:43 -04:00
Louis Rolland 0a3cc93c2f fix: #555 Handling minValue/maxValue in generate snapshot process 2021-08-11 10:08:45 +02:00
Grahame Grieve c6f392b7e0 #466: fix problem checking types on logical models 2021-05-05 09:54:22 +10:00
Grahame Grieve 9ae04aed03 Fix compartment definitions of ListResource.source and subject for R3 and R4 2021-05-05 08:51:36 +10:00
Grahame Grieve 898665f356 fixes for #483: Quantity subclasses copy() functions not all transferring values 2021-05-04 12:43:07 +10:00
Grahame Grieve 30be8a0dc1
Merge branch 'master' into issue_438 2021-03-29 09:08:04 +10:00
Grahame Grieve 5187fdd398 fix issues related to R4B generation 2021-03-12 06:28:56 +11:00
palanm a3e003740a fixing crlf to lf 2021-02-17 14:13:37 -08:00
palanm cc03acb3c3 Junit test for Copy method 2021-02-17 11:32:18 -08:00
palanm c8fa589baa Added the copying of "extension" fiels 2021-02-16 17:27:53 -08:00
Grahame Grieve 8fac290ebe #426 - fix serialization of NULL enumerations 2021-02-08 09:33:36 +11:00
Grahame Grieve c95b07f0f1 #426 - fix serialization of NULL enumerations 2021-02-08 09:32:06 +11:00
Grahame Grieve b9664caec0 fix error message suppression on tooling client 2020-12-03 12:46:43 +11:00
jamesagnew eb1c67c1cb Account for review comments 2020-10-19 14:56:54 -04:00
jamesagnew 1922f549bb Improve multithreaded performance of datetime types 2020-10-19 14:56:54 -04:00