Paul Robson
f941329fcc
bug: check temporary variable hasn't been set yet
2021-12-22 11:50:43 -05:00
Paul Robson
369744488d
test: check that coding is translated
2021-12-22 11:50:05 -05:00
Paul Robson
137592ecbf
test: check that coding is translated
2021-12-22 11:47:23 -05:00
Grahame Grieve
e4d3047138
#357 : fix bug looking for contained resources inside bundles
2021-12-17 14:38:21 +11:00
Grahame Grieve
3118cdc132
Add support for new FHIR Versions
2021-12-17 12:08:40 +11:00
dotasek
80382865de
Merge branch 'master' into tx-server-cache-analysis
2021-12-15 16:49:39 -05:00
Grahame Grieve
c15e60f2c6
main Build fixes: new version of FHIR (4.3.0) + transit to using release indicators in version + fix various build issues
2021-12-15 07:28:19 +11:00
dotasek
1c1e7d22ca
WIP track server requests
2021-12-07 16:08:28 -05:00
markiantorno
444c8951c6
removing jetbrains annotations
2021-12-06 12:54:40 -05:00
Mark Iantorno
4d0692ff61
Validate contains ( #669 )
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* wip
* first go at this, still some failing tests
* post-pairing with Grahame
* wip
* failing test cases
* fixed InstanceValidator to respect new validation options for both references and contained resources
* removed dead code
* put copyright back in BaseValidator
* wip
2021-11-25 15:52:29 -05:00
Grahame Grieve
dbf8179b6d
Merge pull request #663 from hapifhir/gg-202111-cs-work
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Gg 202111 cs work
2021-11-18 11:43:37 +11:00
Grahame Grieve
bbac44fc52
reduce spurious logging
2021-11-18 08:09:43 +11:00
dotasek
cccf1cebae
Update maven config and tests to allow Java 8, 11 and 17 builds ( #653 )
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* Updates to enable Java 8, 11, and 17 builds
* Set surefire args according to profile + update jacoco verison
* Add comments for surefire profile args.
* Temporarily skip failing test
* Object based parameters ***NO_CI***
* Cleanup skipped test, move new pipeline codo
* Update validator_test_case_version
2021-11-16 09:26:53 -05:00
Grahame Grieve
5a33d5c15a
merge conflicts + rework rendering + gather all HTTP access to SimpleHTTPClient + add TerminologyCacheManager
2021-11-09 16:24:21 +11:00
Grahame Grieve
1aae6c8c76
rework HTTP client - all client calls route through SimpleHTTPClient + define CommonPackages infrastructure
2021-11-09 11:38:25 +11:00
markiantorno
7bcd2b6434
Adding changes for logging request and resp
2021-11-08 16:10:04 -05:00
Grahame Grieve
d91b26e69b
Add getServerVersion to tooling client
2021-11-09 06:13:18 +11:00
Grahame Grieve
c8c96e13fd
Merge pull request #615 from lschmierer/graphql_fixes
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Fix GraphQLSchemaGenerator to produce valid GraphQL schemas
2021-11-03 11:26:45 +11:00
Grahame Grieve
1c65a9b261
Gg 202110 validation various ( #634 )
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* add explicit control over the User-Agent header, and make sure headers flow through properly to all calls
* #328 - wrong processing of markdown URLs
* test fixes for URL handling
* fix tests
* improved validation of UUIDs
* fix test case dependency
* Add Dicom Package builder
2021-10-29 16:26:50 -04:00
Grahame Grieve
237897965b
Gg 202110 misc validation ( #617 )
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* NPE fixes
* Smart Health Cards support in validator
* Fix bug generating spreadsheets due to sheet name length limitations
* Implement descendent-of filter
* more NPE fixes
* add Element.removeChild
* fix issue generation snapshot and content reference, and work around old erroneous binding description in R4
* improve SHC validation error
* fix for NPE generating ConceptMap spreadsheet
* fix crash in IG publisher rendering illegal content
* Improve slicing error messages
* more improving error message resolving slicing
* add missing code + track prohibited / required elements (improve rendering of IGs)
* fix for broken links in R4B IGs
* fix bug related to logger in FHIRToolingClient
* fix bug related to logger in context
* enable detection of whether tx server knows about value set and better track returned errors from tx server
* make likely source URL visible outside ProfileUtilities
* fix renderers - don't make nonvalid URLs into html links + fix NPE +
* fix bug with sheetnames generating spreadsheets
* supper branches in current version of packages
* report slicing information automatically where slicing is based on profile + fix shc support + support codesystem-properties-mode + fix value set validation on profiles + fix wrong entry point on vaildating contained resources with profiles
* fix misleading validation message + add -ips parameter for validator
* hint not warning when it's an example questionnaire
2021-10-10 17:37:02 -04:00
Lukas Schmierer
6bf58e678e
change import comment to be compatible with graphql-tools
2021-10-04 16:06:07 +02:00
Lukas Schmierer
04a72c6e29
use ElementBaseInput instead of ElementBase for input types
2021-10-04 16:03:17 +02:00
Lukas Schmierer
98a99ec630
fix duplicate scalar "date"
2021-10-04 13:21:29 +02:00
Lukas Schmierer
d67f7c9926
print correct type in json format comment
2021-10-04 13:11:55 +02:00
Lukas Schmierer
6981e75765
fix parameter scalars to be lowercase
2021-10-04 12:11:36 +02:00
katiesmilecdr
3b6a2c91cf
update ListResource profile in r4 ( #612 )
2021-09-29 12:38:13 -04:00
Mark Iantorno
72b7300700
Adding blank case for ExpressionNode.toString() in r4 and r5. ( #609 )
2021-09-27 14:52:55 -04:00
Mark Iantorno
ad18e131d8
Issue 602 ( #607 )
...
* r5 changes
* r4 changes
* dstu3 changes
* dstu2 changes
* updating release notes
2021-09-27 14:04:59 -04:00
Mark Iantorno
e5a05f5562
Terminology client headers ( #599 )
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* wip
* adding tests for headers in client
* fix
* r4 updated httpclient
* updating http client code for r4 and dstu3
* dunno why this didn't get added before
2021-09-09 16:32:19 -04:00
Grahame Grieve
b5723bab50
Merge branch 'master' into issue-555
2021-08-24 06:00:27 +10:00
jnmeijer
66b9e180e6
Improved performance of hashNWS ( #570 ) ( #573 )
...
Co-authored-by: Jonathan Meijer <jonathan.meijer@telus.com>
2021-08-11 15:44:20 -04:00
Mark Iantorno
a9abd8f824
https://github.com/hapifhir/org.hl7.fhir.core/issues/557 ( #571 )
2021-08-11 10:07:43 -04:00
Louis Rolland
0a3cc93c2f
fix : #555 Handling minValue/maxValue in generate snapshot process
2021-08-11 10:08:45 +02:00
Grahame Grieve
c6f392b7e0
#466 : fix problem checking types on logical models
2021-05-05 09:54:22 +10:00
Grahame Grieve
9ae04aed03
Fix compartment definitions of ListResource.source and subject for R3 and R4
2021-05-05 08:51:36 +10:00
Grahame Grieve
898665f356
fixes for #483 : Quantity subclasses copy() functions not all transferring values
2021-05-04 12:43:07 +10:00
Grahame Grieve
30be8a0dc1
Merge branch 'master' into issue_438
2021-03-29 09:08:04 +10:00
Grahame Grieve
5187fdd398
fix issues related to R4B generation
2021-03-12 06:28:56 +11:00
palanm
a3e003740a
fixing crlf to lf
2021-02-17 14:13:37 -08:00
palanm
cc03acb3c3
Junit test for Copy method
2021-02-17 11:32:18 -08:00
palanm
c8fa589baa
Added the copying of "extension" fiels
2021-02-16 17:27:53 -08:00
Grahame Grieve
8fac290ebe
#426 - fix serialization of NULL enumerations
2021-02-08 09:33:36 +11:00
Grahame Grieve
c95b07f0f1
#426 - fix serialization of NULL enumerations
2021-02-08 09:32:06 +11:00
Grahame Grieve
b9664caec0
fix error message suppression on tooling client
2020-12-03 12:46:43 +11:00
jamesagnew
eb1c67c1cb
Account for review comments
2020-10-19 14:56:54 -04:00
jamesagnew
1922f549bb
Improve multithreaded performance of datetime types
2020-10-19 14:56:54 -04:00
Gerlach, Winfried
0cb038ed0a
performance: improve speed of comparing UriTypes
2020-10-07 19:36:03 +02:00
Grahame Grieve
77d33e8afa
Fix comment parsing and add focus to FHIRPath function extensions
2020-10-01 11:04:34 +10:00
Grahame Grieve
46d1987cd0
refactor FHIRPath to report error locations for run time errors
2020-09-30 12:10:59 +10:00
Grahame Grieve
5be73ff9c5
rename org.hl7.fhir.utilities.cache to org.hl7.fhir.utilities.npm
2020-09-30 09:24:26 +10:00
Grahame Grieve
510344aa1b
Fix FHIRPath engine for updated tests for date addition/subtraction
2020-09-30 09:22:16 +10:00
markiantorno
dcf3f5f218
Upping UCUM dependency, fixing old junit dependencies
2020-08-26 17:26:39 -04:00
Grahame Grieve
6322aef891
Fix bug in parser around nulls in arrays
2020-08-12 04:03:41 +10:00
Grahame Grieve
4add0f3ac8
Continue to work on connection timeout issues
2020-08-07 11:26:44 +10:00
Grahame Grieve
3e33c8a835
ongoing work around connection problems with tx.fhir.org
2020-08-06 22:33:54 +10:00
Grahame Grieve
572016e40a
fix compile
2020-08-06 07:53:18 +10:00
Grahame Grieve
3f6207bf4f
improve handling of timeout issues in client
2020-08-06 07:35:49 +10:00
Oliver Egger
4f21c40f83
set equivalence relationship in parsing
2020-06-22 12:34:00 +02:00
Oliver Egger
8d59817d26
json parse r4
2020-06-08 10:47:55 +02:00
Grahame Grieve
94467b270a
standardise terminology client across versions
2020-06-07 08:42:14 +10:00
Oliver Egger
ae4c3bbe0c
remove disabled r4 fml tests
2020-06-05 17:56:14 +02:00
jamesagnew
17411a3659
Merge branch 'master' into ja_20200524_npm_rework
2020-05-30 12:07:17 -04:00
Grahame Grieve
4af4925657
move turtle parser + tests to Utilities
2020-05-30 09:38:48 +10:00
jamesagnew
444b612805
Start reworking NPM manager
2020-05-24 15:02:37 -04:00
Grahame Grieve
463a557402
Release new version 4.2.30
2020-05-12 11:54:28 +10:00
Grahame Grieve
edea997312
Clean up license
2020-05-12 08:55:27 +10:00
Grahame Grieve
1f5663bfdf
update R4 code (issue #70 )
2020-05-12 08:42:55 +10:00
markiantorno
89f98bb960
I cast you out unclean spirit.
2020-04-29 16:55:40 -04:00
markiantorno
368a45a150
Fix for HAPI-FHIR issue 1820
2020-04-29 14:08:36 -04:00
Grahame Grieve
c829de2f86
Merge branch 'master' into testing_updates
2020-04-24 07:20:35 +10:00
markiantorno
9c83540c2f
Merge branch 'master' of https://github.com/hapifhir/org.hl7.fhir.core into validator_gui
2020-04-23 10:47:00 -04:00
markiantorno
a7e874501e
Tests updated to JUnit Jupiter. Various quality of life improvements.
2020-04-21 20:36:17 -04:00
markiantorno
5c06cfcfb8
removed hardcoded path
2020-04-17 14:34:52 -04:00
markiantorno
0b92c7efe5
removed hardcoded path
2020-04-17 14:16:54 -04:00
markiantorno
55622f53cb
Fix for NPEs in Base64BinaryType. Added tests to cover the cases. Updated for all FHIR versions.
2020-04-14 22:28:32 -04:00
Grahame Grieve
53ef98198f
fix for issue #148 - UuidType is not annotated
2020-04-09 10:56:14 +10:00
Grahame Grieve
d2dc15e2c8
throw Error when a value is assigned to NamingSystem.url
2020-04-07 14:49:27 +10:00
Grahame Grieve
3edfeda13a
Release new version 4.2.14
2020-04-06 10:20:49 +10:00
Grahame Grieve
1da57be1c0
support comments in json source when configured to do so
2020-04-02 11:00:42 +11:00
Rob Hausam
314380be77
Remove erroneous r5 model import statements from r4 NarrativeGenerator.
2020-03-30 09:47:58 -05:00
Rob Hausam
2defba63ec
Fix incorrect appending of <br/> tag causing it to be escaped.
2020-03-29 16:42:07 -05:00
Grahame Grieve
afb0453e7b
Merge pull request #160 from rhausam/multiple-expansion-version-notice
...
Support listing multiple "Expansion based on" versions.
2020-03-29 16:53:11 +11:00
Rob Hausam
49a6c9d746
Support listing multiple "Expansion based on" versions.
2020-03-28 20:37:56 -05:00
markiantorno
5d9f1d734a
Full disclosure: this isn't really a 'bug' per say, it's more of a best practice thing. The only reason I'm making this change is because I'm working on a parser in my spare time that will most likely never see the light of day, and these accessors are causing me problems because both the line and column fields are private and need to be accessed through the appropriate accessor.
2020-03-28 16:48:37 -04:00
Grahame Grieve
239331ef76
improve parsing error message when parsing json
2020-03-28 06:09:37 +11:00
Grahame Grieve
f732c7bf0c
ICD11 Generator support
2020-03-20 05:15:24 +11:00
Grahame Grieve
851d1fc228
fix for 1.4.0 problems
2020-03-17 11:13:50 +11:00
Grahame Grieve
c46d4dd779
fix bugs around XML version + add ICD-11 generator
2020-03-17 11:10:50 +11:00
patrick-werner
60474cd8c9
moved all Locale/Message handling Code to utils: I18nBase
2020-03-13 18:53:16 +01:00
patrick-werner
109b80ed6f
start movin i18n code Contexts -> utilities
2020-03-13 09:53:59 +01:00
patrick-werner
86711ac16f
readding all the i18n work
2020-03-12 23:26:05 +01:00
jamesagnew
109dea9a02
Use ValidationOptions instead of TerminologyServiceOptions
2020-03-02 06:18:00 -05:00
Grahame Grieve
137506f37f
set id when parsing StructureMap
2020-03-02 09:04:16 +11:00
Grahame Grieve
d535bbaacb
Use packages.fhir.org
2020-02-18 14:31:09 +11:00
Ken Stevens
490aef6f9b
fixed Meta.getSecurity(String,String) bug
2020-02-12 20:39:37 -05:00
Grahame Grieve
8c7eab4066
Merge pull request #126 from lmckenzi/igpub-validation-fixes
...
Keep new IGPublisher stuff from raising errors when down-converted to…
2020-01-22 06:30:16 +11:00
Lloyd McKenzie
01c34f6dd3
Keep new IGPublisher stuff from raising errors when down-converted to R4. Also changed Spreadsheet extension so it doesn't raise errors when used.
2020-01-20 18:41:06 -07:00
Oliver Egger
b1802ac30e
serialize item() func as [] and not .[]
2020-01-11 00:10:08 +01:00
Oliver Egger
0ad3882132
FML updates for tests and validator
2020-01-11 00:10:07 +01:00
Grahame Grieve
8b25da3443
re-org validator tests
2019-12-30 10:25:59 +11:00