1646 Commits

Author SHA1 Message Date
Grahame Grieve
c5d6e0f5f4 Merge remote-tracking branch 'origin/master' 2023-02-28 05:58:54 +11:00
Grahame Grieve
4c30621491 structuremap validation and invariant fixes for forthcoming R5 release 2023-02-27 18:32:38 +11:00
Grahame Grieve
a62c8683f2
Merge pull request #1139 from hapifhir/gg-202302-map-validation-2
Work on StructureMap validation
2023-02-27 09:14:13 +11:00
Grahame Grieve
2bd73c650e Work on StructureMap validation 2023-02-27 07:30:04 +11:00
Grahame Grieve
edf5ecf275
Merge pull request #1138 from hapifhir/gg-202302-map-validation
FML validation
2023-02-25 16:41:26 +11:00
Grahame Grieve
d3a407e369 FML validation 2023-02-25 14:05:03 +11:00
dotasek
76c01a98aa
Add basic checkstyle plugin config (#1122)
Co-authored-by: dotasek <david.otasek@smilecdr.com>
2023-02-24 15:05:49 -05:00
Grahame Grieve
521e72a5ff
Merge pull request #1110 from balhoff/rdf-wg-r5-with-generated
Implement R5 RDF format changes
2023-02-24 10:21:19 +11:00
markiantorno
e9607783da Updating version to: 5.6.100-SNAPSHOT and incrementing test cases dependency. 2023-02-23 18:15:08 +00:00
markiantorno
e2185d7d5c Release: v5.6.99
## Validator Changes

* Fix validation for query references with empty parameter values
* Fix validation for conditional references

## Other code changes

* Fix resource rendering for conditional references
* Fix bug caused by changing DiagnosticReport.conclusion to markdown
* Track target types on references in FHIRPath
* Minor type checking fixes for FHIRPath
* Fix bugs in FHIRPath type checking discovered during R5 preparation
* Add standardsStatus support to core model
* Update okhttp library
* Allow HTTPS for terminology server URL
* Update table generator to suppress external links in base row and column
***NO_CI***
2023-02-23 17:50:57 +00:00
dotasek
5d6636ba8c
Bump okhttp version (#1131)
Co-authored-by: dotasek <david.otasek@smilecdr.com>
2023-02-23 11:14:50 -05:00
Grahame Grieve
1eeee429ce More markdown detection work 2023-02-21 16:52:32 +11:00
Grahame Grieve
3eda8580fc fix rendering for conditional references 2023-02-21 16:46:02 +11:00
Grahame Grieve
76a3129b30 fix validation of conditional references 2023-02-20 23:48:16 +11:00
Grahame Grieve
455d2774da remove reference to package-client folder 2023-02-20 10:44:11 +11:00
Grahame Grieve
38a55d261d update table generator to suppress external links in base row and column 2023-02-18 15:13:13 +11:00
Grahame Grieve
fecf024952 FHIR-40387 Improve guidance for markdown datatype 2023-02-16 13:03:37 +11:00
Grahame Grieve
3011b37df4 fix bugs in XHTML parser (common entities) 2023-02-16 10:07:18 +11:00
Jim Balhoff
c3580528bb Fix Turtle syntax errors with multiline comments. 2023-02-15 09:58:25 -05:00
markiantorno
9c768415f2 Updating version to: 5.6.99-SNAPSHOT and incrementing test cases dependency. 2023-02-15 10:37:45 +00:00
markiantorno
7ec74d0321 Release: v5.6.98
## Validator Changes

* Fix bug checking canonical URLs in bundles with dashes in them
* Fix extension messages (modifier and normal messages reversed)
* Change how error location paths are reported in bundles for easier resolution (no counting!)
* fix bugs checking whether binding is allowed in corner cases

## Other code changes

* Rendering Improvements: Additional Bindings, Search Parameters, Operation Definitions
* FHIRPath implementations for comparable(), highBoundary(), lowBoundary()
* Fix list of canonical resources from VersionUtilities
* Fix bug parsing html entities in XHTML parser
* Rename extension to http://hl7.org/fhir/StructureDefinition/structuredefinition-imposeProfile
***NO_CI***
2023-02-15 10:13:36 +00:00
Grahame Grieve
d1690a9416
Merge pull request #1101 from hapifhir/do-20230202-fix-jsonobject-instant-test
Fix JsonObjectTests interaction with Instant
2023-02-15 08:31:58 +11:00
Jim Balhoff
97772ada1e Merge branch 'master' into rdf-wg-r5 2023-02-14 13:47:28 -05:00
Grahame Grieve
33a84012f2 fix bug parsing html entities 2023-02-14 17:32:26 +11:00
Grahame Grieve
d5d83bea9c fix broken links in R5 builds 2023-02-14 09:53:22 +11:00
Grahame Grieve
3a427385c5 FHIR QA driven changes 2023-02-12 17:53:41 +11:00
Grahame Grieve
e6548bcccd add unCamelCaseKeepCapitals 2023-02-09 17:39:47 +11:00
markiantorno
97604fdff5 Updating version to: 5.6.98-SNAPSHOT and incrementing test cases dependency. 2023-02-07 12:55:19 +00:00
markiantorno
c91376f3b9 Release: v5.6.97
## Validator Changes

* no changes

## Other code changes

* Fix for Extensions moving in R5
***NO_CI***
2023-02-07 12:28:44 +00:00
markiantorno
eec7c33e63 Updating version to: 5.6.97-SNAPSHOT and incrementing test cases dependency. 2023-02-05 21:04:53 +00:00
markiantorno
729e7afb33 Release: v5.6.96
## Validator Changes

* no changes

## Other code changes

* Fix bug with duplicate value in getResourceNames()
***NO_CI***
2023-02-05 20:42:24 +00:00
Grahame Grieve
1d4f1e9d90 fix bug with duplicate value in getResourceNames() 2023-02-06 05:38:02 +11:00
markiantorno
b3cebe7bc6 Updating version to: 5.6.96-SNAPSHOT and incrementing test cases dependency. 2023-02-03 20:09:35 +00:00
markiantorno
1696b56b50 Release: v5.6.95
## Validator Changes

* Fixes for FHIRPath as() operator in r4 and r5

## Other code changes

* no changes
***NO_CI***
2023-02-03 19:45:12 +00:00
dotasek
7b3e206b1c Fix JsonObjectTests interaction with Instant 2023-02-02 13:52:01 -05:00
markiantorno
ea41a8b6a6 Updating version to: 5.6.95-SNAPSHOT and incrementing test cases dependency. 2023-02-02 17:07:22 +00:00
markiantorno
67329e20ad Release: v5.6.94
## Validator Changes

* no changes

## Other code changes

* Test release
***NO_CI***
2023-02-02 16:34:58 +00:00
Jim Balhoff
5dc19cd052 Tweak spacing. 2023-02-01 11:55:11 -05:00
markiantorno
e922cc2a97 Updating version to: 5.6.94-SNAPSHOT and incrementing test cases dependency. 2023-02-01 07:27:59 +00:00
markiantorno
4e97bb0d5a Release: v5.6.93
## Validator Changes

* Fix for NPE rendering resources
* Consider CanonicalResource to be a CanonicalResource when validating profile references
* Work around error in R5 sdf-29 invariant

## Other code changes

* XHTML processing: Cater for "." in XML element and attribute names
* Handle R3 encoding of primitive values when validating profiles
* Improve error messaging when validating StructureDefinition
* Temporary Support for MedicationStatement in R5
* Work around for Identifier.use = ? in THO R5 package (old error)
* Rework Package API to allow for authentication on package servers
* Structure mapping now finds source Structure Definition by URI and sets ParserBase logical property appropriately.
* DOn't convert ig-r4 when converting package versions
***NO_CI***
2023-02-01 07:02:20 +00:00
Jim Balhoff
69ce2b45f2 Output lists in examples using RDF lists. Don’t output fhir:index. 2023-01-31 14:11:29 -05:00
Grahame Grieve
08ed54fd35 Rework Package API to allow for authentication on package servers 2023-01-31 10:32:21 +11:00
Grahame Grieve
4ab03c5c93 cater for "." in XML element and attribute names 2023-01-31 07:23:52 +11:00
dotasek
cca38587ce
Cleanup jetbrains annotations (#1090)
Co-authored-by: dotasek <david.otasek@smilecdr.com>
2023-01-23 18:27:47 -05:00
markiantorno
cb441456a8 Updating version to: 5.6.93-SNAPSHOT and incrementing test cases dependency. 2023-01-20 23:14:26 +00:00
markiantorno
dc677cad51 Release: v5.6.92
## Validator Changes

* update FHIRPath implementation for corrections to 'as' (R5 only in validator)
* Critical Security fix: enforce correct paths when unpacking archives (SecurityAdvisory-1082, CVE TBA)

## Other code changes

* Update to latest FHIRPath for older versions
* Add new ElementModel based parser for StructureMaps
* go-publish related changes
* FTP Client upload and logging improvements
* Refactor base64 handling for Android compatibility

## Security Note

The validator unzips archive files to the local file system when
it is scanning zip files it has been asked to validate, and when it is
installing packages. These processes are now resistant to the zip-slip
vulnerability.
***NO_CI***
2023-01-20 22:57:29 +00:00
dotasek
b50aec5912
Advisory fix 1 (#1089)
* Update cache and comparison downloads to use https

* Zip Slip tests and fix

* Zip Slip tests 2 and fix

* Add missing tempDir child in ScannerTest

* Add win format zip test

* Add tests to r4b

* Add tests and fixes for slips in tgz processing

* Update fhir-test-cases version
2023-01-20 16:56:57 -05:00
Grahame Grieve
f8e6371e1f
Merge branch 'master' into gg-202301-sm-errors 2023-01-20 19:44:24 +11:00
Grahame Grieve
68b36d3cb5 go-publish related changes 2023-01-20 11:23:17 +11:00
dotasek
f58b7acfb5
Swaps isBase64 with internal implementation for Android compatibility (#1079)
* Adding animal sniffer to display all issues related to android compatibility.

* Duplicate isBase64 internally

Co-authored-by: Vitor Pamplona <vitor@vitorpamplona.com>
Co-authored-by: dotasek <david.otasek@smilecdr.com>
2023-01-18 18:40:24 -05:00