Commit Graph

836 Commits

Author SHA1 Message Date
Grahame Grieve e2d1cbfffa msic commit 2022-08-09 20:19:39 +10:00
markiantorno 8051f476a9 Updating version to: 5.6.55-SNAPSHOT and incrementing test cases dependency. 2022-08-03 15:01:07 +00:00
markiantorno 24dbe8b984 Release: v5.6.54
## Validator Changes

* Fix for errors in FHIRPath evaluation (see https://chat.fhir.org/#narrow/stream/179266-fhirpath/topic/String.20functions)

## Other code changes

* R4B BackboneType fixes
* Add R4B to R5 interconversion code
* Improvements to Rendering Documents
* Add uuid to primitive types list
***NO_CI***
2022-08-03 14:28:56 +00:00
Grahame Grieve d562ee0ffa new release 2022-07-29 17:59:06 +10:00
markiantorno 8978130451 Updating version to: 5.6.54-SNAPSHOT and incrementing test cases dependency. 2022-07-25 22:10:34 +00:00
markiantorno ec87c3a0b4 Release: v5.6.53
## Validator Changes

* Add support for OID 1.3.160 (very short OIDs are special)
* Fix evaluation of ValueSets that have only one value set import

## Other code changes

* Rework precision checking in datetime
* Update version conversion to not drop modifierExtensions
* Fix DocumentRendering to generate Composition Narrative if not present
* Restore Search Parameters (missing due to R5 draft generation issues)
* Don't access getBinaries directly in XVerExtensionManager

***NO_CI***
2022-07-25 21:49:05 +00:00
markiantorno fa0597f864 Updating version to: 5.6.53-SNAPSHOT and incrementing test cases dependency. 2022-07-22 06:10:23 +00:00
markiantorno aa6094c451 Release: v5.6.52
## Validator Changes

* Fix issue with startsWith in FHIRPath engine
* Fix bugs validating references (some references not resolved)
* Fix minor issue supporting 4.3.0 (R4B)
* fix bug loading R5 extensions

## Other code changes

* Fix NPE rendering bundles
* R5 Changes to ConceptMap
* Fix bug rendering extensions
* Fix bug accessing polymorphic fields when rendering
* Fix bug around lazy loading packages when validating references
* Add ability to suppress serialising ids when serialising element models
***NO_CI***
2022-07-22 05:50:56 +00:00
dotasek 14494d23b9
Use property to set apache poi version (#861)
Co-authored-by: dotasek <david.otasek@smilecdr.com>
2022-07-18 10:43:51 -04:00
markiantorno bb13edfdc0 Updating version to: 5.6.52-SNAPSHOT and incrementing test cases dependency. 2022-07-18 10:41:30 +00:00
markiantorno 078ca1e13a Release: v5.6.51
## Validator Changes

* no changes

## Other code changes

* Update R5 for revised ConceptMap in R5 cibuild, and release new core library for R5 build process
***NO_CI***
2022-07-18 10:23:13 +00:00
Grahame Grieve 023aea34fb R4B and R5 extension changes 2022-06-28 15:39:15 +03:00
markiantorno 982ce5f58f Updating version to: 5.6.51-SNAPSHOT and incrementing test cases dependency. 2022-06-24 18:48:18 +00:00
markiantorno 4a654122fb Release: v5.6.50
## Validator Changes

* Improved logging when discriminator doesn't match doing slicing
* Use correct IPS branch when validating
* Load R5 extensions when validating (draft)
* Make it possible to run tests cases directly from validator (see command line help)

## Other code changes

* Regenerate R4B code for final R4B release
* Reduce text logging when running tests
* Minor test case fixes
* Fix fetching package by canonical to use pkgcanonical instead of canonical
* Fix broken link rendering code system references
* improvements to profile validation
***NO_CI***
2022-06-24 18:32:05 +00:00
dotasek ae8b21014a Bump version to 5.6.50-SNAPSHOT 2022-06-24 11:29:30 -04:00
markiantorno 891aaf4a20 Release: v5.6.49
## Validator Changes

* Improved logging when discriminator doesn't match doing slicing
* Use correct IPS branch when validating
* Load R5 extensions when validating (draft)
* Make it possible to run tests cases directly from validator (see command line help)

## Other code changes

* Regenerate R4B code for final R4B release
* Reduce text logging when running tests
* Minor test case fixes
* Fix fetching package by canonical to use pkgcanonical instead of canonical
* Fix broken link rendering code system references
* improvements to profile validation
***NO_CI***
2022-06-24 12:41:29 +00:00
Grahame Grieve 2e49c97be5 Prepare release 2022-06-24 14:02:17 +02:00
dotasek 1f3a79fe53 Update comments in Jacoco-maven-plugin re: autogenerated code 2022-06-15 09:38:03 -04:00
dotasek 1fee28fe84
Feature - run JUnit tests from validator_cli (#835)
* WIP add initial test running code

* Importing test modules fix breaking tests 1

* Clean up pom dependencies, move execution before context load

* Re-org and document cli pom

* Set more dependencies to compile. Print entries in classpath

* Try running via internal Executors

* Clearer class names + provide clear output

* Clean up test summarys and output + update class regex to junit default

* Refactor to avoid having to extend class

* Trim down dependency additions in pom + javadoc

* Add the rest of the modules to TestExecutor

* Parse additional params for classname filter and module

* Add experimental JUnit 4 runner in case JUnit 5 hates us.

* Include JUnit4 tests via adapters. Need to refactor for better naming.

* Update LoadIgTests to JUnit 5

* Gentle refactor, print execution time

* Remove unnecessary interface, organize packages

* Remove cached resources (need to fix this)

* Allow setting of txCache globally for tests + fix r5 tests

* Mild refactor of TestExecutor + Reorder test execution

* Add fhirTestCasesDirectory to testConfig + get r4 tests working

* Add dstu2016may and dstu3 tests

* Add dstu2 tests

* Add convertors tests

* Refactor resourceNameForFile + don't copy existing files

* Get all txCache directories centrally and allow all to live in same dir

* Start extracting txCache resources

* Finish extracting txCache resources

* Fix failing GraphQLEngineTest

* Try an mvn install for the pull pipeline

* Clean and refactor

* Test coverage

* Fix GraphQLEngineTests for local jar run

* More refactoring, more tests

* Add bare test for TxCacheResourceExtractor

Co-authored-by: dotasek <david.otasek@smilecdr.com>
2022-06-14 17:04:00 -04:00
markiantorno 3484b891d5 Updating version to: 5.6.49-SNAPSHOT and incrementing test cases dependency. 2022-06-08 07:01:23 +00:00
markiantorno 17ce4678d4 Release: v5.6.48
## Validator Changes

* Clean up the -extension parameter - make implementation conistent with documentation
* Stop auto-converting parameters to strings for string functions e.g. .length() in the FHIRPath engine
* Add parameter -implicit-fhirpath-string-conversions for old FHIRPath string conversion functionality

## Other code changes

* Fix NPE counting descendents when validating
* Fix bug processing invalid HTTP response
***NO_CI***
2022-06-08 06:41:48 +00:00
Mark Iantorno cd38bdd43a Updating test case dependency to v1.1.101
***NO_CI***
2022-06-08 04:26:16 +00:00
Grahame Grieve b0dfc9f281 fix bug counting children + fix issue with automatic string conversion in FHIRPath + fix bug in HTTP client + fix bug rendering profile comparison 2022-06-08 08:56:46 +10:00
dotasek a435beb29c
Backport ProfileUtilities changes from r5 to r4b (#827)
Plus update fhir-test-cases version

Co-authored-by: dotasek <david.otasek@smilecdr.com>
2022-06-02 09:30:43 -04:00
markiantorno 2c8db93787 Updating version to: 5.6.48-SNAPSHOT and incrementing test cases dependency. 2022-05-27 17:24:16 +00:00
markiantorno 567a9b2ce7 Release: v5.6.47
## Validator Changes

* Significant improvement in performance of validation (10-100 fold for simple resources)
* Add output tracker to trask progress of validation (Validate %R against %P..........20..........40..........60..........80.........|)
* Alter per-1 to handle different precision on start/end
* Add support for a -jurisdiction parameter, preparing for jurisdictionally specific constraints in profiles
* Fix bug in snapshot generation where type slices on a mandatory element were all marked as mandatory
* Add warnings when potential matches are found when performing reference resolution in bundles

## Other code changes

* extend FHIRPath to support lowBoundary(), highBoundary() and precision()
* Fix for inefficiency in StructureMap engine
* Update version of PubPack used by the IGPublisher
* Handle scope on TestScript R4 <-> r5 conversion
* Fix bug converting extension context = Resource (R4 <-> R5 conversion)
* Update VSAC importer for changes to VSAC FHIR authorization
* Fix broken links in profile comparison due to cross version issues
***NO_CI***
2022-05-27 16:52:13 +00:00
markiantorno 3ab828c381 Updating version to: 5.6.47-SNAPSHOT and incrementing test cases dependency. 2022-05-12 10:35:09 +00:00
markiantorno eca2fa5a5c Release: v5.6.46
## Validator Changes

* Trim unknown resource types when pre-adopting cross version extensions with type=Reference

## Other code changes

* Package Client: Get Packages by Dependency
* Snapshot Generator (R4b/R5): Fix generation of complex extension snapshot + improve rendering
* New tests for StructureMap execution
***NO_CI***
2022-05-12 10:18:11 +00:00
Grahame Grieve 7d667880f1 set up release 2022-05-12 17:55:36 +10:00
Grahame Grieve be631a5130 Trim unknown resource types when pre-adopting extensions of type Reference from future versions 2022-05-11 02:14:08 +10:00
markiantorno a4fd92633d Updating version to: 5.6.46-SNAPSHOT and incrementing test cases dependency. 2022-05-06 01:02:54 +00:00
markiantorno f2134e9643 Release: v5.6.45
## Validator Changes

* Support IGs #current where main instead of master

## Other code changes

* Add id to Profile CSVs
***NO_CI***
2022-05-06 00:29:32 +00:00
Grahame Grieve 70139914a8 release 2022-05-06 10:01:56 +10:00
Grahame Grieve 7a7e3240b4 ElementDefinition adornments 2022-05-05 23:09:55 +10:00
markiantorno 264e79bc24 Updating version to: 5.6.45-SNAPSHOT and incrementing test cases dependency. 2022-05-05 01:29:36 +00:00
markiantorno 5801daeb08 Release: v5.6.44
## Validator Changes

* Handle invalid HTTP responses better when accessing packages

## Other code changes

* Fix various rendering NPEs
***NO_CI***
2022-05-05 01:09:45 +00:00
Grahame Grieve 1f0b04f92c update test case version 2022-05-05 10:32:07 +10:00
markiantorno 6df50d482b Updating version to: 5.6.44-SNAPSHOT and incrementing test cases dependency. 2022-04-28 02:39:13 +00:00
markiantorno 3fffad10e3 Release: v5.6.43
## Validator Changes

* fix problem with non-new data types on xver extensions
* enable -extension parameter for validator

## Other code changes

* Fix bug when converting resolved clinical status for allergy intolerance
***NO_CI***
2022-04-28 02:20:19 +00:00
markiantorno 5fc2e9d6ec Updating version to: 5.6.43-SNAPSHOT and incrementing test cases dependency. 2022-04-23 14:25:48 +00:00
markiantorno 4f5aa8754c Release: v5.6.42
## Validator Changes

* Fix invalid FHIR version bug when loading IGs with explicit FHIR version

## Other code changes

* Fix reverse references in GraphQL searches
* Regenerate R4B code for candidate final release (not quite final yet)
* Various minor fixes for bugs found doing R4B finalization (wildcard types, version difference comparisons)
***NO_CI***
2022-04-23 14:06:50 +00:00
dotasek 1645982389
Fix for issues/766 - reverse references with _history in GraphQL (#790)
* Create and use getIdPart

* Add tests and changes for dstu3, r4, r4b, and r5

* Update get/set Id javadoc

Co-authored-by: dotasek <david.otasek@smilecdr.com>
2022-04-22 18:06:24 -04:00
markiantorno 6328230f9f Updating version to: 5.6.42-SNAPSHOT and incrementing test cases dependency. 2022-04-12 04:03:54 +00:00
markiantorno 8785babf24 Release: v5.6.41
## Validator Changes

* Handle reslicing within the same profile
* Fix up wrong handling of context on exists() in FHIRPath
* Add hints to profiles around behavior of pattern on repeating elements
* Ignore all tooling extensions when validating
* support specifying an alternative version when loading source using -ig parameter
* Don't validate Bundle.entry.fullUrl as a reference to some other content

## Other code changes

* Improved output for unit test comparisons
* Fix conversion issues around Base64Binary
* Fix for R4/R5 DataRequirements conversion for DeviceUsage
* Add AdditionalBindings Rendering (draft)
* Display all designations when rendering ValueSets
* Fix bug where expansions have empty objects some times
* Fix R4B Snapshot generation
* Enable Linking to fragment CodeSystems
***NO_CI***
2022-04-12 03:31:27 +00:00
Grahame Grieve 7cec5a5a92 set up release 2022-04-12 12:09:24 +10:00
Grahame Grieve 8a05e4b2b2 various fixes
* Handle reslicing within the same profile
* Fix up wrong handling of context on exists() in FHIRPath
* Add hints to profiles around behavior of pattern on repeating elements
* Ignore all tooling extensions when validating
2022-04-05 15:52:33 +10:00
markiantorno 87fed0cfc8 Updating version to: 5.6.41-SNAPSHOT and incrementing test cases dependency. 2022-03-30 23:21:31 +00:00
markiantorno f80a28816c Release: v5.6.40
## Validator Changes

* Add further clarification to Value set imports warning message

## Other code changes

* Consistent use of string values for primitive type conversions
* Fix problem with generated NPM Packages
* Fix URls when processing markdown while generating snapshots
* Default output to console, with additional output available via -debug option in CLI.
* Bump jackson-databind version to fix security vulnerability.
***NO_CI***
2022-03-30 23:05:39 +00:00
dotasek 2686a53549 Bump test cases version 2022-03-29 18:19:48 -04:00
markiantorno b075c5695f Updating version to: 5.6.40-SNAPSHOT and incrementing test cases dependency. 2022-03-18 04:05:44 +00:00