Commit Graph

1217 Commits

Author SHA1 Message Date
markiantorno 3ab828c381 Updating version to: 5.6.47-SNAPSHOT and incrementing test cases dependency. 2022-05-12 10:35:09 +00:00
markiantorno eca2fa5a5c Release: v5.6.46
## Validator Changes

* Trim unknown resource types when pre-adopting cross version extensions with type=Reference

## Other code changes

* Package Client: Get Packages by Dependency
* Snapshot Generator (R4b/R5): Fix generation of complex extension snapshot + improve rendering
* New tests for StructureMap execution
***NO_CI***
2022-05-12 10:18:11 +00:00
Grahame Grieve eddcaba803 get packages by dependency 2022-05-12 16:19:01 +10:00
Grahame Grieve 9c20a28710 allow suppression of npm management logging 2022-05-11 06:58:46 +10:00
Grahame Grieve 0999c8d460 fix issue with complex extension snapshot goes into 3rd level when it doesn't need to 2022-05-11 02:13:35 +10:00
markiantorno a4fd92633d Updating version to: 5.6.46-SNAPSHOT and incrementing test cases dependency. 2022-05-06 01:02:54 +00:00
markiantorno f2134e9643 Release: v5.6.45
## Validator Changes

* Support IGs #current where main instead of master

## Other code changes

* Add id to Profile CSVs
***NO_CI***
2022-05-06 00:29:32 +00:00
Grahame Grieve d820260184 Support IGs with main not master 2022-05-06 10:00:04 +10:00
markiantorno 264e79bc24 Updating version to: 5.6.45-SNAPSHOT and incrementing test cases dependency. 2022-05-05 01:29:36 +00:00
markiantorno 5801daeb08 Release: v5.6.44
## Validator Changes

* Handle invalid HTTP responses better when accessing packages

## Other code changes

* Fix various rendering NPEs
***NO_CI***
2022-05-05 01:09:45 +00:00
Grahame Grieve 3bc1f4bb38 release notes 2022-05-05 07:56:10 +10:00
Grahame Grieve c6d1ff1fa0 Handle invalid HTTP responses better 2022-05-05 05:41:32 +10:00
markiantorno 6df50d482b Updating version to: 5.6.44-SNAPSHOT and incrementing test cases dependency. 2022-04-28 02:39:13 +00:00
markiantorno 3fffad10e3 Release: v5.6.43
## Validator Changes

* fix problem with non-new data types on xver extensions
* enable -extension parameter for validator

## Other code changes

* Fix bug when converting resolved clinical status for allergy intolerance
***NO_CI***
2022-04-28 02:20:19 +00:00
Grahame Grieve 0a58140163 enable -extension parameter for validator 2022-04-27 08:28:29 +10:00
markiantorno 5fc2e9d6ec Updating version to: 5.6.43-SNAPSHOT and incrementing test cases dependency. 2022-04-23 14:25:48 +00:00
markiantorno 4f5aa8754c Release: v5.6.42
## Validator Changes

* Fix invalid FHIR version bug when loading IGs with explicit FHIR version

## Other code changes

* Fix reverse references in GraphQL searches
* Regenerate R4B code for candidate final release (not quite final yet)
* Various minor fixes for bugs found doing R4B finalization (wildcard types, version difference comparisons)
***NO_CI***
2022-04-23 14:06:50 +00:00
Grahame Grieve a464c81474 release notes 2022-04-23 23:02:22 +10:00
Grahame Grieve 79bff7d1bb fix bugs in temp rework 2022-04-22 16:36:16 +10:00
Grahame Grieve fa92f85f3c Merge remote-tracking branch 'origin/master' 2022-04-22 07:36:53 +10:00
Grahame Grieve 10f2325e19 R4B quality fixes 2022-04-22 07:36:28 +10:00
Grahame Grieve 5fef79c08d Update Validator -version handling, and improve tx server error handling 2022-04-20 11:17:40 +10:00
Grahame Grieve c58516ce44 remove references to c:\temp 2022-04-20 09:59:30 +10:00
dotasek a7354f999e
Dotasek oe r4r5structuremapconversion (#775)
* Fix exception R5 to R4 of StructureMap #771

* Fix typo

* Enhance conversion from r5 to r4 + add failing test for r4 to r5

* WIP Convert R4 variable to R5 parameter and try to get correct dataType

* Clean up rough-work test

* Move static methods to FHIRPathConstant class

Co-authored-by: dotasek <david.otasek@smilecdr.com>
2022-04-13 18:22:58 -04:00
markiantorno 6328230f9f Updating version to: 5.6.42-SNAPSHOT and incrementing test cases dependency. 2022-04-12 04:03:54 +00:00
markiantorno 8785babf24 Release: v5.6.41
## Validator Changes

* Handle reslicing within the same profile
* Fix up wrong handling of context on exists() in FHIRPath
* Add hints to profiles around behavior of pattern on repeating elements
* Ignore all tooling extensions when validating
* support specifying an alternative version when loading source using -ig parameter
* Don't validate Bundle.entry.fullUrl as a reference to some other content

## Other code changes

* Improved output for unit test comparisons
* Fix conversion issues around Base64Binary
* Fix for R4/R5 DataRequirements conversion for DeviceUsage
* Add AdditionalBindings Rendering (draft)
* Display all designations when rendering ValueSets
* Fix bug where expansions have empty objects some times
* Fix R4B Snapshot generation
* Enable Linking to fragment CodeSystems
***NO_CI***
2022-04-12 03:31:27 +00:00
Grahame Grieve 6f3fe23f49 refactor additional bindings 2022-04-12 13:11:42 +10:00
Grahame Grieve b9902833c5 Merge branch 'master' of https://github.com/hapifhir/org.hl7.fhir 2022-04-12 09:12:35 +10:00
Grahame Grieve c3281340a0 Add Additional Bindings rendering 2022-04-12 09:11:18 +10:00
Grahame Grieve 7e9b148837 Don't validate Bundle.entry.fullUrl as a reference 2022-04-07 00:20:43 +10:00
Grahame Grieve 76411218ac
Merge pull request #782 from hapifhir/gg-202204-various
various fixes
2022-04-06 09:28:09 +10:00
Grahame Grieve 8a05e4b2b2 various fixes
* Handle reslicing within the same profile
* Fix up wrong handling of context on exists() in FHIRPath
* Add hints to profiles around behavior of pattern on repeating elements
* Ignore all tooling extensions when validating
2022-04-05 15:52:33 +10:00
dotasek 880039c78b
Reorganize TestingUtilities to use expected/actual convention from JUnit (#780)
* Make testing utilities conform to JUnit expected-actual convention

* Refactor to CompareUtilities

* Add tests for CompareUtilities

* RELEASE_NOTES

Co-authored-by: dotasek <david.otasek@smilecdr.com>
2022-04-04 09:44:04 -04:00
markiantorno 87fed0cfc8 Updating version to: 5.6.41-SNAPSHOT and incrementing test cases dependency. 2022-03-30 23:21:31 +00:00
markiantorno f80a28816c Release: v5.6.40
## Validator Changes

* Add further clarification to Value set imports warning message

## Other code changes

* Consistent use of string values for primitive type conversions
* Fix problem with generated NPM Packages
* Fix URls when processing markdown while generating snapshots
* Default output to console, with additional output available via -debug option in CLI.
* Bump jackson-databind version to fix security vulnerability.
***NO_CI***
2022-03-30 23:05:39 +00:00
Grahame Grieve 90e34f89ff Add clarification to error message about value set interpretation 2022-03-31 07:16:11 +11:00
dotasek 6e45dd522e Merge remote-tracking branch 'origin/master' into dotasek-primitivetype-conversion-via-stringvalue 2022-03-18 14:09:12 -04:00
markiantorno b075c5695f Updating version to: 5.6.40-SNAPSHOT and incrementing test cases dependency. 2022-03-18 04:05:44 +00:00
markiantorno e053d5a260 Release: v5.6.39
## Validator Changes

* no changes
* Add messageid to OperationOutcome from Validation
* Add support for new rules around value set interpretation with multiple imported value sets (https://jira.hl7.org/browse/FHIR-25179)

## Other code changes

* Fix for FHIRPathEngine.funcReplaceMatches() incorrectly returning Boolean in DSTU2 & DSTU3
* Fix NPE Processing missing markdown in definitions when generating snapshots
* add support for .matchesFull() and fix .matches() in FHIRPath
* Fix core package identification when loading new R5 core packages
***NO_CI***
2022-03-18 03:46:59 +00:00
Grahame Grieve 48d87a2075
Merge branch 'master' into gg-202203-misc 2022-03-18 12:54:53 +11:00
Grahame Grieve cf95c1a2ba Fix for Jira 25179 - change handling of imports
See https://chat.fhir.org/#narrow/stream/179202-terminology/topic/ValueSet.20defined.20by.20an.20intersection.20.3F
2022-03-18 12:45:40 +11:00
Grahame Grieve 3c4440d430 fix core package test 2022-03-17 21:43:25 +11:00
dotasek 3cc8affbdf Disable time zone based test until it's fixed 2022-03-15 14:24:05 -04:00
dotasek ce796e81bc Fix locale for DateTimeUtilTests 2022-03-15 13:52:51 -04:00
dotasek 209a5e777b Merge remote-tracking branch 'origin/master' into dotasek-primitivetype-conversion-via-stringvalue 2022-03-15 12:36:09 -04:00
markiantorno 8f5db15937 Updating version to: 5.6.39-SNAPSHOT and incrementing test cases dependency. 2022-03-14 21:48:39 +00:00
markiantorno 9ad69aca53 Release: v5.6.38
## Validator Changes

* no changes

## Other code changes

* Fix for FHIRPathEngine.funcReplaceMatches() incorrectly returning Boolean in DSTU2 & DSTU3
***NO_CI***
2022-03-14 21:32:32 +00:00
dotasek fb8e2cfa66 WIP Start building tests 2022-03-11 17:32:09 -05:00
markiantorno e4ce145a0b Updating version to: 5.6.38-SNAPSHOT and incrementing test cases dependency. 2022-03-11 03:21:07 +00:00
markiantorno e86c9afc7a Release: v5.6.37
## Validator Changes

* fix handling of xver extensions with choice sub-extensions
* validate consistency of extension modifier flag with extension use in a profile

## Other code changes

* more presenting extensions when rendering.
* Get package id from 'package' field when 'npm-package' unavailable
* Ignore META-INF contents from other dependencies while building Validator jar
* Fix to r5 TestingUtilities to allow NarrativeGenerationTests to pass.
* fix handling to xver extensions generating snapshots
***NO_CI***
2022-03-11 03:04:43 +00:00
Grahame Grieve a3e8fca51a
Merge pull request #759 from hapifhir/R4B-datatypes-and-xml-cleanup
R4 b datatypes and xml cleanup
2022-03-11 10:53:52 +11:00
Grahame Grieve 791f16a05d fix failing tests. 2022-03-10 11:18:03 +11:00
Grahame Grieve 89b912dde2 Fix cross version extension validation, and check that extensions are consistent wrt isModifier in profiles 2022-03-09 17:37:26 +11:00
Grahame Grieve 2ff53e9bf1 merge
# Conflicts:
#	RELEASE_NOTES.md
2022-03-08 13:25:16 +11:00
Lloyd McKenzie 478663cdf8 Merge branch 'master' of https://github.com/hapifhir/org.hl7.fhir.core into R4B-datatypes-and-xml-cleanup 2022-03-07 19:20:19 -07:00
Grahame Grieve cc983073cd more cross version extensions 2022-03-08 13:19:19 +11:00
Grahame Grieve 9bc11f5b67
Merge pull request #754 from hapifhir/dotasek--package-client-extract-package-id
PackageClient - Get package id from 'package' field when 'npm-package' unavailable
2022-03-08 09:40:33 +11:00
dotasek bb06bae4e6 Apply uniform capitalization requirements for JSON 2022-03-07 16:02:00 -05:00
Lloyd McKenzie 074da98066 Merge branch 'master' of https://github.com/hapifhir/org.hl7.fhir.core into R4B-datatypes-and-xml-cleanup
# Conflicts:
#	org.hl7.fhir.r5/src/main/java/org/hl7/fhir/r5/model/Enumerations.java
2022-03-04 22:01:48 -07:00
Lloyd McKenzie a5302b8934 Fix XML escaping to not escape single-quotes - because our XML serializer always wraps attributes in double-quotes, making escaping unnecessary. 2022-03-04 21:55:31 -07:00
Grahame Grieve 4f652bceee more presenting extensions when rendering. 2022-03-03 07:43:09 +11:00
dotasek cb7cfe9141 Refactor for testing, add tests 2022-03-02 09:43:41 -05:00
dotasek 27732602e3 Extract package-id when default id unavailable 2022-03-01 17:03:17 -05:00
markiantorno 4909286a4b Updating version to: 5.6.37-SNAPSHOT and incrementing test cases dependency. 2022-02-26 05:00:46 +00:00
markiantorno 17bf21ecf8 Release: v5.6.36
## Validator Changes

* No changes

## Other code changes

* fix expansions where inactive = false (was wrongly including inactive codes)
***NO_CI***
2022-02-26 04:42:17 +00:00
Grahame Grieve c5b3e022a4 fix bug where inactive codes always put in expansions, and add unit tests for this 2022-02-25 13:07:07 +11:00
markiantorno 9e693b6a03 Updating version to: 5.6.36-SNAPSHOT and incrementing test cases dependency. 2022-02-19 22:00:05 +00:00
markiantorno 685ea98d37 Release: v5.6.35
## Validator Changes

* no changes

## Other code changes

* fix various rendering issues from core spec
***NO_CI***
2022-02-19 21:28:34 +00:00
Grahame Grieve 4923382138 fix whitespace in messages 2022-02-19 21:45:28 +11:00
Grahame Grieve 99b8122728 Fix rendering problem. to XML resources 2022-02-19 21:43:14 +11:00
markiantorno 73baca035e Updating version to: 5.6.35-SNAPSHOT and incrementing test cases dependency. 2022-02-16 05:52:52 +00:00
markiantorno edd2c43e64 Release: v5.6.34
## Validator Changes

* Improve code validation error when value set can't be supported on tx.fhir.org
* Hide error about regex in core package

## Other code changes

* Fix wrong URL links in processed markdown
* Don't let txCache errors stop the process
* Fix broken links in questionnaire +
***NO_CI***
2022-02-16 05:32:34 +00:00
Grahame Grieve db19b0dd00 Fix broken links + remove error about regex in core package 2022-02-16 14:04:35 +11:00
Grahame Grieve 647d3efcee Merge branch 'master' of https://github.com/hapifhir/org.hl7.fhir 2022-02-16 13:15:19 +11:00
Grahame Grieve 0f1d9db24f Fix wrong URL links + txCache errors + questionnaire rendering at root 2022-02-16 13:14:55 +11:00
markiantorno 1d02e04edd Updating version to: 5.6.34-SNAPSHOT and incrementing test cases dependency. 2022-02-15 11:21:29 +00:00
Grahame Grieve fd36a5b0d2 Merge branch 'master' of https://github.com/hapifhir/org.hl7.fhir 2022-02-15 22:17:36 +11:00
Grahame Grieve fcd1d1494a change location of dev server 2022-02-15 22:16:50 +11:00
markiantorno cf7415b33e Release: v5.6.33
## Validator Changes

* no changes

## Other code changes

* Fix error access experimental on canonical
***NO_CI***
2022-02-15 11:00:55 +00:00
markiantorno e1613a7087 Updating version to: 5.6.33-SNAPSHOT and incrementing test cases dependency. 2022-02-14 06:57:10 +00:00
markiantorno 4a8aeda4e9 Release: v5.6.32
## Validator Changes

* no changes

## Other code changes

* Fix NPE error in Patient renderer
***NO_CI***
2022-02-14 06:25:49 +00:00
Grahame Grieve d91f6a450b Fix Patient Renderer 2022-02-14 16:23:22 +11:00
markiantorno 4ab3fea400 Updating version to: 5.6.32-SNAPSHOT and incrementing test cases dependency. 2022-02-14 01:27:51 +00:00
markiantorno 04bb17783e Release: v5.6.31
## Validator Changes

* accept regex on ElementDefinition and ElementDefinition.type, and an error for regex on ElementDefintion.type (though core packages have it on the wrong place)
* fix handling of cross-version extensions on choice elements
* fix OID validation (accept 1.3.88 GTIN OID)
* only consider bindable types when checking for multi-type bindings

## Other code changes

* Fix definitions in ListResource ("List" not "ListResource")
* introduce fhir-tools-settings.conf (see https://confluence.hl7.org/display/FHIR/Using+fhir-tool-settings.conf)
* Rendering fixes & improvements for Questionnaire and Patient and partial dates
* improvements to relative link handling in markdown when generating snapshots
* updates to package tools for changes to package.json#type (see https://confluence.hl7.org/pages/viewpage.action?pageId=35718629#NPMPackageSpecification-Packagemanifest)
* fix semver handling for tags in versions
* Bump mockito and bytebuddy versions for Java 17 compatibility & fix Kotlin ref
***NO_CI***
2022-02-14 01:08:37 +00:00
Grahame Grieve 2dfa821e12 Add content to whitespace message 2022-02-14 09:13:35 +11:00
Grahame Grieve ea3ae8d82c fix bug in ini file 2022-02-12 09:53:33 +11:00
Grahame Grieve a570ef08a6 Merge branch 'master' of https://github.com/hapifhir/org.hl7.fhir 2022-02-12 08:37:02 +11:00
Grahame Grieve 76ed4abba7 Changes for debugging on OSX (fhir-tools-settings.conf) 2022-02-12 07:55:59 +11:00
Grahame Grieve b49e791cd1 Updates for changes to package.json type 2022-02-11 09:36:47 +11:00
Grahame Grieve 9f2d9f9dac
Merge pull request #735 from hapifhir/gg-202202-last-windows-commit
Gg 202202 last windows commit
2022-02-10 12:18:35 +11:00
Grahame Grieve 60cd37eca6 fix semver version for -tag tags 2022-02-10 11:18:51 +11:00
Grahame Grieve e547bb749b fix OID validation 2022-02-10 11:17:49 +11:00
markiantorno 045299ae7a Updating version to: 5.6.31-SNAPSHOT and incrementing test cases dependency. 2022-02-07 15:56:51 +00:00
markiantorno 7ee476a9b6 Release: v5.6.30
## Validator Changes

* no changes

## Other code changes

* Use builders for SimpleWorkerContext and ValidationEngine to enforce initialization order for caches and capabilities
***NO_CI***
2022-02-07 15:07:54 +00:00
dotasek 0e3e410ea1 Merge branch 'master' into simpleworkercontextbuilder 2022-02-04 09:50:42 -05:00
markiantorno 703f907289 Updating version to: 5.6.30-SNAPSHOT and incrementing test cases dependency. 2022-02-03 23:15:06 +00:00
markiantorno 9a89045bac Release: v5.6.29
## Validator Changes

* no changes

## Other code changes

* Fix package location for CacheVerificationLogger
***NO_CI***
2022-02-03 22:42:27 +00:00
dotasek e0bdbda5b7 Fix package location for CacheVerificationLogger 2022-02-03 16:35:26 -05:00
Grahame Grieve 1979ec61d7 more http logging 2022-02-04 07:26:47 +11:00
dotasek 4897922fde Merge branch 'master' into simpleworkercontextbuilder 2022-02-03 14:34:39 -05:00