Commit Graph

2608 Commits

Author SHA1 Message Date
Grahame Grieve d8e2e020af fix failing tests 2023-07-21 12:41:56 +10:00
Grahame Grieve cf1b53bba0 Update terminology server implementation and tests for changes to test cases 2023-07-21 05:38:09 +10:00
Grahame Grieve f52df7c0cc Fix obligation rendering message 2023-07-20 08:21:51 +10:00
Grahame Grieve 616cf5fdb3 Add provisional support for alternate codes 2023-07-20 08:21:19 +10:00
Grahame Grieve 274c49bde5 Workaround ClinicalImpression definition problem in core spec 2023-07-20 08:20:18 +10:00
Grahame Grieve 3f67cbee9e Merge remote-tracking branch 'origin/master' 2023-07-18 11:12:10 +10:00
Grahame Grieve 8c0539136c suppress spurious error message 2023-07-18 11:08:09 +10:00
Grahame Grieve 55c12301ba remove shex 2023-07-18 11:06:06 +10:00
dotasek 89d0f6f867
Remove weso shex (#1352)
* Bump shex dependency

* Bump jackson to 2.15.2

* Bump thymeleaf to 3.1.1.RELEASE

* Remove es.weso shexs_2.12 and ignored tests
2023-07-17 18:20:53 -04:00
dotasek ceceb6c7d5
Bump shex dependency (#1351) 2023-07-17 16:35:00 -04:00
dotasek 6598c1d28e
Add test for setVsAsUrl parameter setting (#1345) 2023-07-12 16:16:09 -04:00
Grahame Grieve 5e30c0ee92 Fix checking FHIRPath statements on inner elements of type slices 2023-07-09 08:03:35 +10:00
Grahame Grieve c174400e73 fix scan of naming systems 2023-07-08 22:08:36 +10:00
markiantorno 6a187a9232 Updating version to: 6.0.22-SNAPSHOT and incrementing test cases dependency. 2023-07-07 12:36:19 +00:00
markiantorno 45ae02cf1d Release: v6.0.21
## Validator Changes

* Fix up processing conditions in -watch mode
* Fixes for validating against logical models (for fixed up CDA core package)
* Better testing of extension context (when limited to profile)
* Fix handling of UCUM codes when no terminology server
* Report hints and warnings on some code validation that had been not reported
* Better validation of valuesets when checking derived profiles

## Other code changes

* Render reference identifier if there is one when rendering references
* Hide empty place holder column when rendering by profile
* Fix npe rendering extensions + improve base64 presentation
* OMOP terminology importer
* update SPDX code system in R4/R4B for support for not-open-source
* Fix up type handling for conversions between R4/R4B and R5 (OperationDefinition fix)
***NO_CI***
2023-07-07 12:10:05 +00:00
Grahame Grieve c6e68dc9c6 Fixes to validator for new CDA package (proper handling of logical model types) 2023-07-07 09:38:55 +10:00
Grahame Grieve 9a48340b6c render reference identifier if there is one 2023-07-07 05:01:16 +10:00
Grahame Grieve b46f968665 hide empty place holder column 2023-07-07 05:00:59 +10:00
Grahame Grieve 0004e06a5d fix npe rendering extensions + improve base64 presentation 2023-07-07 05:00:51 +10:00
Grahame Grieve 7166d55153 better validation of derived valuesets + better handling of validation failures on UCUM when no terminology server 2023-07-05 07:22:30 +10:00
Grahame Grieve 70e123e69b Fix up rendering of base64 content 2023-07-05 07:18:12 +10:00
markiantorno 6db701767a Updating version to: 6.0.21-SNAPSHOT and incrementing test cases dependency. 2023-06-30 23:19:08 +00:00
markiantorno 6a6c425562 Release: v6.0.20
## Validator Changes

* no changes

## Other code changes

 * Fix for SPDR not-open-source in code
 * fix name and title in VSAC import process
 * More work on Android support + fix issues in NPM package installation that caused
***NO_CI***
2023-06-30 22:52:51 +00:00
markiantorno 3c8e26f078 Updating version to: 6.0.20-SNAPSHOT and incrementing test cases dependency. 2023-06-30 05:37:45 +00:00
markiantorno 3b82a4d829 Release: v6.0.19
## Validator Changes

* no changes

## Other code changes

* Fix for SPDR not-open-source in code
* fix name and title in VSAC import process
* More work on Android support
***NO_CI***
2023-06-30 05:08:20 +00:00
Grahame Grieve de8a2f0f73 Re-add support for not-open-source in the R5 code base 2023-06-30 08:41:02 +10:00
markiantorno 06a1d523a3 Updating version to: 6.0.19-SNAPSHOT and incrementing test cases dependency. 2023-06-29 05:12:43 +00:00
markiantorno 76955fa3d5 Release: v6.0.18
## Validator Changes

* Fix issue loading SPDX value set + Fix missing code for 'not-open-source'
* Allow target to be treated as source when validating FML
* Fix issues validating names and urls for logical models
* Don't duplicate warnings about missing expressions on invariants in R5

## Other code changes

* Handle case where base hasn't got a snapshot generating snapshots
***NO_CI***
2023-06-29 04:47:28 +00:00
Grahame Grieve 236cf06946 Handle case where base hasn't got a snapshot generating snapshots 2023-06-29 13:17:15 +10:00
markiantorno 7ffbe7703d Updating version to: 6.0.18-SNAPSHOT and incrementing test cases dependency. 2023-06-28 07:13:43 +00:00
markiantorno 345151b132 Release: v6.0.17
## Validator Changes

* Fix check for correct type name use in logical models (for CDA)
* Fix bug loading packages (introduced working on minimal loading)
* Fir NPE processing R3 Structure Definitions
* exempt ele-1 from constraint consistency checking
* Add -watch-scan-delay and -watch-settle-time
* fix missing error validating structure maps
* Fix bug with erroneous warning in snapshot generation about profile not being found
* Update SPDX code system to latest version
* Output proper filename in validation log

## Other code changes

* Refactor version utility code
* Fix help placeholders
* Better error when handling loading resources
* fix duplicate element generation in CDA.AD type snapshot generation
* Fix message about rendering problem. Actual solution... not sure.
* Minimal Memory model changes for Npm for Android
***NO_CI***
2023-06-28 06:47:19 +00:00
Grahame Grieve 9b94e6a1ec Fix test for correct type name in logical models (CDA) 2023-06-28 15:10:20 +10:00
Grahame Grieve 284ad1c2be fix bug loading package 2023-06-28 11:06:09 +10:00
Grahame Grieve 704d498300 Fix NPE handling R3 structure definitions 2023-06-28 05:56:14 +10:00
Grahame Grieve 3bb5e8d06d better error handling loading resources 2023-06-27 22:18:35 +10:00
Grahame Grieve 1a144091c4 fix duplicate element generation in CDA.AD type snapshot generation 2023-06-27 22:18:14 +10:00
Grahame Grieve 40380ff0f3 Fix message about rendering problem. Actual solution... not sure. 2023-06-24 09:06:19 +10:00
Grahame Grieve 189c3c7b7d Fix bug with erroneous warning in IG publisher log about profile not found 2023-06-24 09:06:01 +10:00
Grahame Grieve 2f253f3457 Update SPDX implementation 2023-06-24 08:55:51 +10:00
markiantorno 67cb3006f2 Updating version to: 6.0.17-SNAPSHOT and incrementing test cases dependency. 2023-06-21 07:40:48 +00:00
markiantorno 8bd0f0b1ad Release: v6.0.16
## Validator Changes

Post DevDays Release - many significant changes!

* Add ```-watch-mode``` parameter (See [doco](https://confluence.hl7.org/display/FHIR/Using+the+FHIR+Validator#UsingtheFHIRValidator-Watchmode))
* Start checking constraint expressions defined in profiles and logical models, and update FHIRPath for logical models
* Start checking ElementDefinition.mustHaveValue and ElementDefinition.valueAlternatives
* Start validating derived questionnaires
* Tighten up checking on FHIRPath - enforce use of ```'```, and don't accept ```"``` for string delimiters
* Add ```-allow-double-quotes-in-fhirpath``` parameter ([doco](https://confluence.hl7.org/display/FHIR/Using+the+FHIR+Validator#UsingtheFHIRValidator-LegacyFHIRPathSetting))
* Fix error when validating profiles that mix canonical() and Reference() types
* Fix extension context checking
* Fix erroneous FHIRPath expression eld-11 when loading
* Fix incomplete support for ```-display-issues-are-warnings``` parameter
* Fix broken NullFlavor binding in R4
* Fix various NPE errors doing value set validation (+ logging tx operations)
* Minor performance improvements to start up time
* Auto-update implied slicing elements when min < slice min

## Other code changes

* Add CodeQL to the build process
* Various NPE fixes
* Add getValueAsString(TemporalPrecisionEnum) method to date/time types
* Fix rendering for unresolvable ValueSets
* Remove r4b eclipse project files
* Upgrade multiple dependency libraries (per CodeQL)
* Only record sorting errors when generating snapshots when debug mode is on
* Tighten up SSL certificate checking
* Partial refactor of CLI parameter handling
* Fix path regex (per CodeQL)
* Remove erroneous logging from conversion tests
* Rendering improvements for various profile related extensions
* More work on TxTests operation (lenient wrt extensions)
* Fix handling of summary extension (delete duplicate tools summary extension, and don't inherit it)
* Reprocess URLs in Markdown extensions on both StructureDefinition and ElementDefinition
* Improve URL detection in markdown when reprocessing URLs
***NO_CI***
2023-06-21 07:09:07 +00:00
Grahame Grieve 6effe6ebe9 update FHIRPath for logical models and nested type checking and fix repeat() checking 2023-06-21 09:22:18 +10:00
Grahame Grieve 04f7805be4 Auto-update extension min- slicing + fix handling of summary extension + update markdown element url handling + update url detection in markdown 2023-06-21 09:21:05 +10:00
Grahame Grieve 52abef6f2c Auto-update extension min- slicing + fix handling of summary extension + update markdown element url handling + update url detection in markdown 2023-06-21 09:20:35 +10:00
Grahame Grieve 4e5c501b1f
Merge pull request #1315 from hapifhir/do-20230619-datetimetype-string-precision
New getValueAsString(TemporalPrecisionEnum) method for DateTimeType
2023-06-20 09:56:40 +10:00
Grahame Grieve 2607d028a7 fix compile problem 2023-06-20 09:15:36 +10:00
Grahame Grieve 551892c095 Merge remote-tracking branch 'origin/master' 2023-06-20 09:11:51 +10:00
Grahame Grieve 9cf8e0368c fix up extension context checking 2023-06-20 08:36:22 +10:00
Grahame Grieve ec7b79bc1e Fix rendering for unresolvable value sets 2023-06-20 07:02:26 +10:00
dotasek ae59d97ba5 Document new method, add to all FHIR versions 2023-06-19 15:41:04 -04:00