Commit Graph

3538 Commits

Author SHA1 Message Date
Grahame Grieve 6314ad61bb
Merge pull request #1729 from hapifhir/EllipseSupport
Added support for tracking whether elements are ellipsed and for rend…
2024-09-22 08:51:39 -04:00
Grahame Grieve 5466595215 Work around problem with language value set being marked experimental 2024-09-22 06:41:38 -04:00
Grahame Grieve fedf7e9e6d Add more debugging to validation failure 2024-09-22 06:39:28 -04:00
oliveregger 2f165863e7 fix test, revert var patch 2024-09-21 18:50:01 +02:00
Grahame Grieve 8cfcbf389e Fix various issues rendering and validating additional bindings with usage contexts 2024-09-21 00:35:01 -04:00
oliveregger d69a8e3e43 FHIR-46548: where clause on alias #1748 2024-09-18 23:09:24 +02:00
markiantorno f3bd5b9be8 Updating version to: 6.3.27-SNAPSHOT and incrementing test cases dependency. 2024-09-17 22:00:24 +00:00
markiantorno 46affee48f Release: v6.3.26
## Validator Changes

* Validate of experimental property on bindings
* Add -no-experimental-content flag
* Allow JSON named extensions to be structure types other than logical
* Process relative URLs properly in base when generating snapshots

## Other code changes

* Fix rendering path for value set references for kindling
* refactor error handling in ProfileUtilities
* Fix for NPE processing packages
***NO_CI***
2024-09-17 21:09:53 +00:00
Grahame Grieve fbfd81532d Merge remote-tracking branch 'origin/master' 2024-09-17 16:18:15 +08:00
Grahame Grieve 0d8c5942e7 Fix rendering path for value set references for kindling 2024-09-17 14:11:13 +08:00
Grahame Grieve 9dae4118ae refactor error handling in ProfileUtilities 2024-09-14 08:26:07 +08:00
Grahame Grieve bfed8a15d5
Merge pull request #1744 from hapifhir/2024-09-gg-logical-json
2024 09 gg logical json
2024-09-12 14:07:06 +08:00
Grahame Grieve 07f1981a8c Fix for NPE processing packages 2024-09-12 11:56:04 +08:00
Grahame Grieve 8056dced3e Allow JSON named extensions to be structure types other than logical 2024-09-12 11:55:24 +08:00
Grahame Grieve 337aaf80cf Process relative URLs properly in base when generating snapshots 2024-09-12 11:54:40 +08:00
markiantorno 4af3deff26 Updating version to: 6.3.26-SNAPSHOT and incrementing test cases dependency. 2024-09-11 18:28:22 +00:00
markiantorno f09bc48f7d Release: v6.3.25
## Validator Changes

* no changes

## Other code changes

* Fix logic for cache clearing on package cache initialization
***NO_CI***
2024-09-11 17:40:08 +00:00
Lloyd McKenzie 729c2da4c0 Fixed elide spelling 2024-09-10 08:23:26 -06:00
Lloyd McKenzie fff805e5b7 Made changes as recommended by Grahame and Elliot 2024-09-10 08:07:01 -06:00
markiantorno 2c8122a42e Updating version to: 6.3.25-SNAPSHOT and incrementing test cases dependency. 2024-09-09 19:09:24 +00:00
markiantorno 813f8200a2 Release: v6.3.24
## Validator Changes

* Fix expression for con-3 properly (fix validation problem on some condition resources)
* Fix FHIRPath bug using wrong type on simple elements when checking FHIRPath types
* FHIRPath: Allow _ in constant names (per FHIRPath spec)
* Fix value set rendering creating wrong references
* Fix bug processing value set includes / excludes that are just value sets (no system value)
* Alter processing of unknown code systems per discussion at ,https://chat.fhir.org/#narrow/stream/179252-IG-creation/topic/Don't.20error.20when.20you.20can't.20find.20code.20system and implement unknown-codesystems-cause-errors
* Improve message for when elements are out of order in profile differentials

## Other code changes

* fix problem where profile rendering had spurious 'slices for' nodes everywhere
* Update SQL-On-FHIR implementation for latest cases, and clone test cases to general test care repository
* Fix problem generating value set spreadsheets
* fix concurrent modification error processing language translations
* Check for null fetcher processing ConceptMaps (#1728)
***NO_CI***
2024-09-09 18:23:37 +00:00
Grahame Grieve ffe0ab6414
2024 09 gg vs sql (#1738)
* Fix bug processing value set includes / excludes that are just value sets (no system value)

* fix value set rendering creating wrong references

* Update SQL-On-FHIR implementation for latest cases, and clone test cases to general test care repository

* Fix expression for con-3 properly (fix validation problem on some condition resources)

* FHIRPath: Allow _ in constant names (per FHIRPath spec)

* Fix FHIRPath bug using wrong type on simple elements when checking FHIRPath types

* release notes

* fix sql-on-fhir tests

---------

Co-authored-by: Grahame Grieve <grahameg@gmail.ccom>
2024-09-09 12:27:08 -04:00
Grahame Grieve 9f9e9dfb8a Merge branch 'master' of https://github.com/hapifhir/org.hl7.fhir.core 2024-09-06 22:18:06 +08:00
Grahame Grieve 7fc34e509a alter processing of unknown code systems per discussion at ,https://chat.fhir.org/#narrow/stream/179252-IG-creation/topic/Don't.20error.20when.20you.20can't.20find.20code.20system and implement unknown-codesystems-cause-errors 2024-09-06 22:18:01 +08:00
Grahame Grieve 6165b154e1
Merge branch 'master' into test_language_concurrency_bug 2024-09-05 04:29:58 +08:00
Grahame Grieve 4603b3ac3c compile fix 2024-09-04 23:25:28 +08:00
Grahame Grieve 515bead90d compile fix 2024-09-04 21:59:01 +08:00
Gjergj Sheldija 51ad87c715 PR comment 2024-09-04 08:16:03 +02:00
Gjergj Sheldija 973ab9e56f possible fix 2024-09-03 15:41:58 +02:00
Grahame Grieve 63ab904401 fix problem where profile rendering had spurious 'slices for' nodes everywhere 2024-09-03 21:27:28 +08:00
Grahame Grieve 7e5014c6d7 Fix problem generating value set spreadsheets 2024-09-03 21:26:53 +08:00
Grahame Grieve 83daa93fbc fix concurrent modification error processing language translations 2024-09-03 21:26:35 +08:00
Grahame Grieve 00f4f0998f Improve message for when elements are out of order 2024-09-03 21:26:17 +08:00
Gjergj Sheldija 8e908da1ab unit tests to check the concurrency bug 2024-09-03 13:50:54 +02:00
Lloyd McKenzie 975653e07d Added support for tracking whether elements are ellipsed and for rendering XHTML versions of XML and JSON content with ellipsed elements 2024-08-29 21:17:20 -06:00
markiantorno 19c8b17575 Updating version to: 6.3.24-SNAPSHOT and incrementing test cases dependency. 2024-08-28 18:45:30 +00:00
markiantorno 2721ebb8c6 Release: v6.3.23
## Validator Changes

* no changes

## Other code changes

* Set fhir-test-cases to release 1.5.20
***NO_CI***
2024-08-28 17:59:21 +00:00
markiantorno 1e5cb4da49 Updating version to: 6.3.23-SNAPSHOT and incrementing test cases dependency. 2024-08-27 21:23:55 +00:00
markiantorno 0bdba83faf Release: v6.3.22
## Validator Changes

* no changes

## Other code changes

* BugFix: Restore loadFromFolder method in FilesystemPackageCacheManager
***NO_CI***
2024-08-27 20:30:39 +00:00
markiantorno c172df802d Updating version to: 6.3.22-SNAPSHOT and incrementing test cases dependency. 2024-08-27 17:54:17 +00:00
markiantorno c92ee550c0 Release: v6.3.21
## Validator Changes

* Security Fix: Move all instantiation of transformerFactory to XMLUtils and set ACCESS_EXTERNAL flags automatically (slightly improvement to output message, but closes possible attack vector)
* Handle 308 redirects when fetching packages
* Fix NPE in ValueSetValidator
* Fix for NPE in IGLoader
* fix version conversion problem for ConceptMap (4<->5): relationship comment getting lost for noMap entries
* Add check for multiple WG extensions (HL7 context)

## Other code changes

* Suppress spurious logging statement
* Add Australian CDA name prefix & uri to mapping transform code
* Add new messages for tx.fhir.org
* Remove narrative from snapshot tests
* Improve complex extension rendering when rendering by profile
* Rewrite processing of map statements when generating snapshots to fix known bugs
* Updates to Capability Statement rendering (and minor Operation Definition rendering improvement)
* Fix wrong reference to CDA classes for unscoped class names
* fix rendering issue for R4 relationship codes in ConceptMap
* rework decimal lowBoundary() and highBoundary() after discussion on Zulip, and add extensive testing
* Fix existing test case for fixed up boundary handling in FHIRPath
* Add CodeSystem fetching for selected code systems for VSAC import
* Drop to saxon 11.6 for now
* fix issue with json unicode whitespace enscaping
* get Java generator running again (though no code regenerated)
* don't escape unicode whitespace in json files
* Fix NPE in questionnaire renderer
* Hack workaround for R4 issue with ProcessPriority
* Rewrite concurrency management for file system package cache
***NO_CI***
2024-08-27 16:42:13 +00:00
Grahame Grieve edd5b7a560
Merge pull request #1717 from hapifhir/do-20240816-xslt-external
Move all instantiation of transformerFactory to XMLUtils and set ACCESS_EXTERNAL flags automatically
2024-08-27 08:00:51 +08:00
Grahame Grieve 9aef2793ce
Merge pull request #1719 from robeastwood-agency/202408-re-cda-au-namespace
Add Australian CDA name prefix & uri
2024-08-27 07:59:36 +08:00
Grahame Grieve be52ad2e96
Merge pull request #1721 from hapifhir/2024-08-gg-misc
2024 08 gg misc
2024-08-27 07:58:48 +08:00
Grahame Grieve 6de8821dce compile fix 2024-08-23 21:52:10 +08:00
Grahame Grieve 1b84fcd5af remove narrative from snapshot tests 2024-08-23 21:51:04 +08:00
Grahame Grieve af75c51fea Improve complex extension rendering when rendering by profile 2024-08-23 21:50:53 +08:00
Grahame Grieve 636dbf14d4 rewrite processing of map statements when generating snapshots to fix known bugs 2024-08-23 21:50:25 +08:00
Grahame Grieve 14758663cf Fix wrong reference to CDA classes for unscoped class names 2024-08-22 08:07:28 +08:00
Grahame Grieve d05a30eeca fix rendering issue for R4 relationship codes 2024-08-19 07:09:17 +08:00
Grahame Grieve 00ad185882 rework decimal lowBoundary() and highBoundary() after discussion on Zulip, and add extensive testing 2024-08-19 07:08:59 +08:00
Rob Eastwood 326e1284eb
Add Australian CDA name prefix & uri
Fixes #1613
2024-08-18 08:44:28 +10:00
Vassil Peytchev c60b2bfe1d fixes on capability statement rendering 2024-08-16 16:53:51 -05:00
Vassil Peytchev eb1b18c853 Merge branch 'master' of github.com:vassilpeytchev/org.hl7.fhir.core into cs-changes 2024-08-16 14:05:20 -05:00
Vassil Peytchev 7dac6306a7
Merge branch 'hapifhir:master' into master 2024-08-16 13:53:35 -05:00
dotasek 60470b1a28 Move all instantiation of transformerFactory to XMLUtils
and set ACCESS_EXTERNAL flags automatically
2024-08-16 10:34:50 -04:00
Grahame Grieve c9bb2b4e55 Fix NPE in questionnaire renderer 2024-08-16 06:46:52 +08:00
Grahame Grieve 5bbb21aad5 Add check for multiple WG extensions 2024-08-16 06:46:41 +08:00
Grahame Grieve 6e5d5cdf40 Hack workaround for R4 issue with ProcessPriority 2024-08-16 06:46:15 +08:00
Vassil Peytchev 2bc9bf9a60 Merge branch 'master' of github.com:vassilpeytchev/org.hl7.fhir.core into cs-changes 2024-08-15 14:33:26 -05:00
Vassil Peytchev 07fe018e75 Update version 2024-08-15 14:32:53 -05:00
Vassil Peytchev c26ca1f427
Merge branch 'hapifhir:master' into master 2024-08-15 13:58:34 -05:00
markiantorno fe2a8e6d11 Updating version to: 6.3.21-SNAPSHOT and incrementing test cases dependency. 2024-08-13 17:31:22 +00:00
markiantorno 1800948c7a Release: v6.3.20
## Validator Changes

* Improved handling of display validation for various languages
* fix xml:space message after discussion on Zulip

## Other code changes

* ValueSet rendering improvements
* Add isUnknownLocalReferencesNotLinks to RenderingContext
* Fix up conceptMap rendering (remove spurious summary table)
* Add R6 ballot 2 to FHIRVersion enum in R5
* rendering fixes for implementers
* improve rendering of bindings with no value sets
***NO_CI***
2024-08-13 16:46:00 +00:00
Grahame Grieve d4097d3dc7 ValueSet rendering improvements 2024-08-13 07:02:52 +08:00
Grahame Grieve f4f978941d add isUnknownLocalReferencesNotLinks to RenderingContext 2024-08-12 05:59:10 +08:00
Grahame Grieve 0114837ede compile fix 2024-08-12 05:32:58 +08:00
Grahame Grieve d11cbded2b improved handling of display validation for various languages 2024-08-11 22:49:51 +08:00
Grahame Grieve 3f34fc1d91 Fix up conceptMap rendering (remove spurious summary table) 2024-08-11 22:30:34 +08:00
Grahame Grieve bf105ae179 Add R6 ballot 2 2024-08-11 22:30:14 +08:00
Grahame Grieve dc6d4fc912 rendering fixes for implementers 2024-08-09 07:52:15 +08:00
Vassil Peytchev 448edf45b0 Merge branch 'master' into cs-changes 2024-08-08 11:52:32 -05:00
Vassil Peytchev f432416ac8 minor cleanup 2024-08-08 11:50:49 -05:00
Vassil Peytchev a5d2e7787d
Merge branch 'hapifhir:master' into master 2024-08-08 10:56:11 -05:00
Grahame Grieve 255a225e51
Merge pull request #1710 from hapifhir/2024-08-gg-no-binding-vs
2024 08 gg no binding vs
2024-08-08 09:16:06 +08:00
Grahame Grieve 4743a0468a improve rendering of bindings with no value sets 2024-08-08 07:41:06 +08:00
Vassil Peytchev 739e0fdbbf Getting Cory's changes 2024-08-06 15:52:34 -05:00
dotasek eba6868afe Merge remote-tracking branch 'origin/master' into do-20240716-fix-code-validation-for-locale 2024-08-05 10:32:51 -04:00
Vassil Peytchev 77eeeac076
Merge branch 'hapifhir:master' into master 2024-08-04 10:57:17 -05:00
markiantorno e6e4efa540 Updating version to: 6.3.20-SNAPSHOT and incrementing test cases dependency. 2024-08-04 15:24:42 +00:00
markiantorno aac96cf897 Release: v6.3.19
## Validator Changes

* Improve performance of supplement processing
* Add support for validating xml:space
* Fix NPE validating maps
* Fix duplicate removal code that caused missed WARNING messages (#1698)
* Fix interaction between terminology cache and validation location  (#1700)
* Better concept map validation
* Improved base64 parsing error
* Add support for unknown code system version validating concept maps
* Fix bug using wrong profile when profiling recursive properties

## Other code changes

* Return null for all toCode enum params that are null
* fix bugs adding publishing WG in element mode
* Fix equality method that caused missed WARNING messages
* fix rendering issues
  * rendering fixes for R6 build
  * don't throw error for wrong rendering mode
  * Document rendering fixes - subject and section
  * more work on forcing valid html generation
  * more hyperlink validation improvements
  * further fixes to link validation
  * fix list inside paragraph
  * fix actor capabilities in wrong place
  * Support missing datatypes
  * Fill out missing anchors
  * Fix wrong handling of contained resources)
  * #1678 - add div to children when exploring Narrative
***NO_CI***
2024-08-04 14:35:44 +00:00
Grahame Grieve 8790780feb fix npe 2024-08-04 10:39:23 +08:00
Grahame Grieve e73447939b improve performance of supplement processing 2024-08-04 10:00:01 +08:00
Grahame Grieve 7fda67ca7e fix rendering issues 2024-08-03 23:46:31 +08:00
Grahame Grieve af5eaafd34 Merge branch 'master' of https://github.com/hapifhir/org.hl7.fhir.core 2024-08-03 23:38:47 +08:00
Grahame Grieve 2f1f59d5f9 rendering fixes for R6 build 2024-08-03 19:32:46 +08:00
Grahame Grieve b248eb7d67 Add support for validating xml:space 2024-08-03 19:31:55 +08:00
Grahame Grieve 7670422a6c don't throw error for wrong rendering mode 2024-08-03 19:31:35 +08:00
Grahame Grieve eecd04924b fix bugs adding publishing WG in element mode 2024-08-03 19:30:54 +08:00
caspears 2d5049c938 CapabilityStatement Message and Document rendering 2024-08-01 23:05:49 -07:00
caspears 4281b0fa48 Render resource profile and supportedProfile title when available 2024-08-01 22:23:29 -07:00
Vassil Peytchev 0ce8a38650 Merge branch 'master' of github.com:hapifhir/org.hl7.fhir.core 2024-08-01 15:09:06 -05:00
Vassil Peytchev f5a9e2b242 Updating to the current version 2024-08-01 14:13:02 -05:00
dotasek c757c6982d Move defensive copy directly to TerminologyCache 2024-07-31 18:19:33 -04:00
Grahame Grieve 2ebcf267ec Document rendering fixes - subject and section 2024-07-30 15:43:32 +08:00
dotasek f30150ff4b
Fix interaction between terminology cache and validation location (#1700)
* DO NOT MERGE TO MASTER

Contains replication for validation location issue

* Don't let the validator mutate a cached result

* Revert filtering of ValidationTests

* WIP start ValidationResult equality implementation

* Move BaseWorkerContext testing to BaseWorkerContextTests

* A little more cleanup

* Code cleanup, and check that cached ValidationResult is a copy

* Complete ValidationResult equals method.
2024-07-29 10:12:55 -04:00
Grahame Grieve c99b7ee53a Improved base64 parsing error 2024-07-28 20:04:28 +08:00
Grahame Grieve 71e8a8294a more work on forcing valid html generation 2024-07-28 20:04:18 +08:00
Grahame Grieve f9ed8dc348 Add support for unknown code system version validating concept maps 2024-07-28 20:03:44 +08:00
Grahame Grieve f0531e9d66 fix bug using wrong profile when profiling recursive properties 2024-07-28 20:02:25 +08:00