Commit Graph

1295 Commits

Author SHA1 Message Date
dotasek 81fef98013
Bump jackson version (#1515)
* Bump jackson version

* Fix license check
2023-12-07 11:01:23 -05:00
dotasek e5688eb8ec
Bump logback in dependencyManagement (#1514) 2023-12-06 17:03:12 -05:00
dependabot[bot] ad9119ff3c
Bump ch.qos.logback:logback-classic from 1.2.3 to 1.2.13 (#1511)
Bumps [ch.qos.logback:logback-classic](https://github.com/qos-ch/logback) from 1.2.3 to 1.2.13.
- [Commits](https://github.com/qos-ch/logback/compare/v_1.2.3...v_1.2.13)

---
updated-dependencies:
- dependency-name: ch.qos.logback:logback-classic
  dependency-type: direct:development
...

Signed-off-by: dependabot[bot] <support@github.com>
Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>
2023-12-06 13:28:34 -05:00
Grahame Grieve 18c4419b9e refactor FHIRPath package 2023-12-01 15:13:33 +11:00
dotasek 37a8373b94
Fix commonmark group and bump version (#1500)
* Fix commonmark group bump version

* Remove dep used for local testing
2023-11-29 14:47:51 -05:00
dotasek 2ea6d44330 Revert "Fix commonmark group bump version"
This reverts commit 5cf89d8202.
2023-11-27 13:14:18 -05:00
dotasek 5cf89d8202 Fix commonmark group bump version 2023-11-27 11:13:31 -05:00
dotasek a04475ea9c Revert "Fix commonmark group bump version"
This reverts commit 6b45c63638.
2023-11-27 11:10:02 -05:00
dotasek 6b45c63638 Fix commonmark group bump version 2023-11-27 11:06:48 -05:00
markiantorno bf426e2d28 Updating version to: 6.2.6-SNAPSHOT and incrementing test cases dependency. 2023-11-24 19:35:02 +00:00
markiantorno 70d3c801d3 Release: v6.2.5
## Validator Changes

* Fix validator not allowing canonical resource extensions in canonical resources in bundles
* Fix bundle validation error on intneral link checking
* Check parameter type for FHIRPath where() and all()
* Validate that composite search parameters have components

## Other code changes

* Refactor timeout control on client
* Support IPS in validation tests
* Remove orphan R4B test
* Improve expansion error messages
* Fix expansion language - don't set for displayName parameter
* Adjust value set rendering for fragment code systems
* Fix NPE rendering some resources
* Fix rendering of TriggerDefinition
* Support parsing ad-hoc json data type fragments
* More memory work for IG Publisher
* Move ILoggingService & VersionUtil
* Fix timeout issue in vsac
* Introduce ips builder + Infrastructure changes for IPS builder
* Move json and xml extensions from extensions pack to tooling ig
* Add support for rendering union and intersections of profiles in profile comparison
* FHIRPath iif() test case fixes
* Add support for IPS validation in test cases
* Fix for broken markdown re-processing
* Improve identifier rendering
* Fix committee URLs
***NO_CI***
2023-11-24 19:08:02 +00:00
Grahame Grieve 59f24b74b4 release 2023-11-25 06:42:35 +13:00
Grahame Grieve f2f10bf27b update test cases 2023-11-17 07:11:24 +11:00
markiantorno 8fe88a320e Updating version to: 6.2.5-SNAPSHOT and incrementing test cases dependency. 2023-11-15 18:56:03 +00:00
markiantorno 29b1cd98dc Release: v6.2.4
## Validator Changes

* Add support for NZ IPS
* Don't fail on erroneously repeating elements, and more bundle link validation
* Rework bundle references validation
* Fix problem creating CDA type discriminators
* Fix bundle resolution rules to conform to the specification in version R4+

## Other code changes

* Fix issue where markdown with multiple characters was being cut off sometimes
* Fix bundle resolution rules to conform to the specification in version R4+
* More work on versioned API
* Fix up VSAC import for large value sets
* Fix FHIRPath cda tests for empty package cache
* Fix problem with R3 expansion
* Add support for CCDA .hasTemplateIdOf(canonical)
* Fix issue where markdown with multiple characters was being cut off sometimes
***NO_CI***
2023-11-15 18:29:25 +00:00
Mark Iantorno bd4bcd63a6 Updating test case dependency to v1.4.17
***NO_CI***
2023-11-15 15:55:58 +00:00
Grahame Grieve 4c6a318749 Fix bundle resolution rules to conform to the specification in version R4+ 2023-11-13 07:38:31 +11:00
markiantorno c128f3b61d Updating version to: 6.2.4-SNAPSHOT and incrementing test cases dependency. 2023-11-11 06:49:45 +00:00
markiantorno 7cb9286e3f Release: v6.2.3
## Validator Changes

* Remove wrong LOINC code for circumference % from vital signs scan
* Remove spurious error when profile discriminators have no value
* Fix as() and ofType() in FHIRPath engine to support type namespaces properly
* Fix problem with FHIRPath engine wrongly checking types in context of CDA
* Fix date validation error in CDA validation
* Update error handling to preserve message ids properly

## Other code changes

* Add rendering of II.system
* Fix extension handling when generating snapshots - which are ignored, overwrite, or add
* Delete some empty java files
* Remove unnecessary snapshot tests
***NO_CI***
2023-11-11 06:24:19 +00:00
Grahame Grieve 6b6a4df426 set up release 2023-11-11 11:49:25 +11:00
Grahame Grieve dc791becaa update error handling to preserve message ids properly 2023-11-09 16:51:15 +11:00
markiantorno c717f898ef Updating version to: 6.2.3-SNAPSHOT and incrementing test cases dependency. 2023-11-07 03:30:21 +00:00
markiantorno 3a7733ea02 Release: v6.2.2
## Validator Changes

* Validate Vital signs Profiles when validating observations
* Hack around problem with vs-1 constraint in R4
* Check for retired status when multiple OID matches exist
* Fix for validating extensions on R5 resources in R4 (R4 special case)
* Minor fixes for standalone ViewDefinition validator

## Other code changes

* Revised Capability Statement rendering (Thanks Vassil Peytchev)
* Fix bug rendering primitive types with an extension that provides a value alternative
* Add links to references when rendering json and xml instances in IG publisher
* Fix bug generating profile spreadsheets
* Support suppress examples when generating snapshots
* VSAC Import improvements
***NO_CI***
2023-11-07 02:46:28 +00:00
Grahame Grieve 0da6f1b28f set up release 2023-11-07 11:11:02 +11:00
Grahame Grieve 35c7e18e55 Validate Vital signs Profiles when validating observations 2023-11-05 09:19:39 +11:00
markiantorno a47dccc7f6 Updating version to: 6.2.2-SNAPSHOT and incrementing test cases dependency. 2023-10-31 16:23:32 +00:00
markiantorno 3c198658e1 Release: v6.2.1
## Validator Changes

* Validate contextInvariant in extension definitions
* fix Typo in TI WG name
* Handle unknown constants properly in FHIRPath
* Fix handling of type ancestors at the root of FHIRPath expressions
* CDA templates with no extension value use urn:oid: not urn:hl7ii:
* Allow URL as a type of string in FHIRPath type checking
* Fix semver validation
* Fix problem resolving context in CDA invariants

## Other code changes

* Finish SQL in FHIR Implementation, but disable sql on fhir tests until package is packaged properly by next release of IG publisher
* Fixes to Search Parameter rendering per FHIR-I decision
* Fix broken links in extension references done by [[[]]]
* Fix broken links in code system rendering of parents
* Support using names in [[[markdown]]] when rendering
* Remove "profile" from tx operations
* Include checkIPSCodes and bundleValidationRules in json
***NO_CI***
2023-10-31 15:51:40 +00:00
dotasek 6fb5b11619 Bump test cases to 1.4.14
***NO_CI***
2023-10-31 10:55:56 -04:00
Grahame Grieve 034b1057e6 CDA templates with no extension value use urn:oid: not urn:hl7ii: 2023-10-28 06:38:16 +11:00
markiantorno b60d9e4f81 Updating version to: 6.2.1-SNAPSHOT and incrementing test cases dependency. 2023-10-24 23:01:44 +00:00
markiantorno 7c3863c6ad Release: v6.2.0
## Validator Changes

* Validation by templateId for CDA
* Fix NPE validating concept maps
* Update ViewDefinition validator for change (alias -> name)
* Fix for NPE validating sql-on-fhir ViewDefinition
* Fix for index out of bounds error when extension uses itself
* Fix issue where .resolve() in FHIRPath didn't work with URL values (and fix typo in i18n system)
* Implement FHIRPath slice() function in validator
* Fix bug where Snapshot generation can run off the end of the differential

## Other code changes

* Breaking API Change: Revise FHIRPath API so hosts can evaluate expressions in custom functions
* Add package use tracking to FHIR cache for validator.fhir.org
* Support for instance-name and instance-description in IG publisher
* Element.removeExtension (support for instance-name and instance-description extensions in IG publisher)
* Split terminology service tests
* Hack for wrong URLs in subscriptions backport
* Remove dependencies for unused UI experiment
* More improvements to profile code generation
***NO_CI***
2023-10-24 22:34:10 +00:00
Grahame Grieve b94d3303ce Bump minor version 2023-10-25 08:16:23 +11:00
dotasek 2732c41d08 Bump test cases to 1.4.13 2023-10-24 16:04:19 -04:00
Grahame Grieve e431770caf
2023 10 gg code gen (#1469)
* Revise FHIRPath API so hosts can evaluate expressions in custom functions

* Implement slice() function in validator

* more improvements to profile generation

* Fix issue where .resolve() in FHIRPath didn't work with URL values (and fix typo in i18n system)

* release notes

* Fix test ignore/exclude issues, bump test cases

---------

Co-authored-by: Grahame Grieve <grahameg@gmail.ccom>
Co-authored-by: dotasek <david.otasek@smilecdr.com>
2023-10-24 15:26:24 -04:00
Grahame Grieve 1534a5b6eb undo test case upgrade 2023-10-21 06:48:17 +11:00
Grahame Grieve e06fee93c2 release notes 2023-10-21 06:44:08 +11:00
Grahame Grieve 2f8a5a071e validation by templateId for CDA 2023-10-20 21:30:25 +11:00
markiantorno 87b756e0c7 Updating version to: 6.1.17-SNAPSHOT and incrementing test cases dependency. 2023-10-16 22:48:30 +00:00
markiantorno b9338024a6 Release: v6.1.16
## Validator Changes

* Fix bug processing value sets containing URLs

## Other code changes

* Add initial support for http://hl7.org/fhir/tools/StructureDefinition/type-profile-style
* More work on sql-on-fhir implementation
* Allow for type parameter to custom functions in FHIRPath
* Fix bugs in processing current packages for XIG
***NO_CI***
2023-10-16 22:19:52 +00:00
Mark Iantorno 925d481b74 Updating test case dependency to v1.4.11
***NO_CI***
2023-10-16 21:26:31 +00:00
dotasek 5ed1e08e6d
Updates for jdk21 (#1462)
* update byte_buddy and lombok versions

* Update license special cases
2023-10-16 15:51:47 -04:00
Grahame Grieve 08c1aabb9d update to test snapshot 2023-10-16 23:59:15 +11:00
markiantorno a31120f15f Updating version to: 6.1.16-SNAPSHOT and incrementing test cases dependency. 2023-10-13 16:03:08 +00:00
markiantorno 17b7528c0f Release: v6.1.15
## Validator Changes

* Support for CDA code validation

## Other code changes

* Update XML Parser & logical model renderer for XML choice groups
* Restore JSON Parser method for HAPI compatibility.
* Maintain OID to URL lookup index
* Fix json parsing of CDA
***NO_CI***
2023-10-13 15:36:00 +00:00
dotasek 800fc9b721
Update pom.xml 2023-10-13 10:21:25 -04:00
Grahame Grieve 3d039a89eb get tests passing 2023-10-12 21:50:39 +11:00
markiantorno 65161437cb Updating version to: 6.1.15-SNAPSHOT and incrementing test cases dependency. 2023-10-10 10:28:06 +00:00
markiantorno faf0e0684c Release: v6.1.14
## Validator Changes

* Make sure logical models get a snapshot generated

## Other code changes

* Fix URL of concept map extension in version conversion
***NO_CI***
2023-10-10 10:01:13 +00:00
markiantorno 5f96bcd35d Updating version to: 6.1.14-SNAPSHOT and incrementing test cases dependency. 2023-10-09 19:09:40 +00:00
markiantorno 2d5efc33d1 Release: v6.1.13
## Validator Changes

* Improve language on constraint error message + add expression checking for SQL on FHIR project

## Other code changes

* Fix uuid() executing StructureMaps and don't throw errors processing StructureMaps
* Add support for test folder in NPM packages
* Fix rendering of XML Attributes in profiles
* Add support for hosts to manage certificate resolution using ISignatureServices + fix issue matching type names when validating logical models
* Make sure snapshots are generated when fetching types
* Workaround issue where R5 build wrongly adds ele-1 to base
* Fix conversion issue associated with ConceptMap.element.target.equivalence in versions previous to R5 (use proper extension URL, and move extension so it can be a modifier. And fix for modifierExtension handling)
* Fix birthDate editing in CmdLineApp
***NO_CI***
2023-10-09 18:43:48 +00:00