Commit Graph

1765 Commits

Author SHA1 Message Date
Grahame Grieve 6232c54f15 Fix core 2023-05-07 12:02:00 -05:00
Grahame Grieve bcb0656ff5 Merge remote-tracking branch 'origin/master' 2023-05-07 11:04:07 -05:00
Grahame Grieve ae13abfc2a performance related changes 2023-05-07 11:04:04 -05:00
Sean McIlvenna fa1e0c5a71 Changes based on performance profiling validation of a large Bundle of 32 patients
Reduced execution time from >2 minutes to 36 seconds
2023-05-07 10:03:12 -05:00
Grahame Grieve d35b881cf1 Fix FHIRPath split function 2023-05-06 09:55:36 -05:00
Grahame Grieve 24b0cc2ee4 Fixes for kindling 2023-05-06 00:55:50 -05:00
Grahame Grieve f734f98c05 update for failing tests 2023-05-05 22:21:05 -05:00
Grahame Grieve b402fd1c45 Fix bug handling filter, and refactor terminology code 2023-05-05 13:55:23 -05:00
Grahame Grieve e8de25c197 fix tests 2023-05-04 10:35:03 +10:00
Grahame Grieve 806c065fcb fix version return + profile support in testing 2023-05-04 10:01:35 +10:00
Grahame Grieve 94fd0ae795 more tests fixes 2023-05-03 17:16:16 +10:00
Grahame Grieve 0b71add74c Always report version on validation, and use the correct type for version in expansion parameters 2023-05-03 11:59:54 +10:00
Grahame Grieve 410f08e6d6 terminology fixes - add expParams to cache key, fix up parameter types, report version 2023-05-02 16:58:54 +10:00
Grahame Grieve 7b5aceb722 Language improvements for Lang Packs 2023-05-01 18:09:15 +10:00
Grahame Grieve 53eae9b51f fix error messages 2023-04-28 10:14:17 +10:00
Grahame Grieve 829549eeff Add support for R6 formal version 2023-04-28 07:36:13 +10:00
Grahame Grieve 9d53b738df Improved error message when code not in value set 2023-04-28 07:36:00 +10:00
Grahame Grieve 949c57acbf Do not spuriously escape in tx text log 2023-04-27 20:08:54 +10:00
Grahame Grieve 30e8f64962 Switch to use text logger for tx unless html is explicitly requested 2023-04-27 20:08:20 +10:00
Grahame Grieve d04242446e standardise lang matching 2023-04-25 21:52:17 +10:00
Grahame Grieve 7487c978f2 fix code system rendering when only 1 or 2 translations 2023-04-25 21:51:59 +10:00
Grahame Grieve 3ed7813973 language translations support in validator 2023-04-25 21:51:31 +10:00
Grahame Grieve 20f73e2094 fix spelling mistakes 2023-04-24 23:07:09 +10:00
Grahame Grieve 1498823d5f fix error processing nucc locally 2023-04-21 18:53:03 +08:00
Grahame Grieve fe86ab1d7c reorg server settings 2023-04-21 18:52:36 +08:00
Grahame Grieve 81b3295f3c fix path problem 2023-04-21 12:25:10 +08:00
Grahame Grieve a3dc74f3e2 fix bug digging into property type 2023-04-21 12:24:37 +08:00
Grahame Grieve 696f060da3 Remove wrong id from generated value sets 2023-04-21 12:23:37 +08:00
Grahame Grieve de4da1eab5 Remove spurious header from ConceptMap rendering 2023-04-21 12:21:58 +08:00
dotasek 9b4b1ae2cc
Add -fhir-settings param to Validator CLI (#1203)
* Start work

* Tests for new Param

* More tests, add param, refactor

* Rename + JsonProperty annotations

* Logging for API keys

* WIP rename search parameter + add settings object for serialization

* Switch to JSON based settings file.

* Rename FHIRSettings and remove ToolGlobalSettings

* Update default path for settings file + expand test

* Only allow single instantiation with explicitFilePath

* Move and expand tests

* Fix failing test

* Add test for FhirSettings param precedence

* Refactor to only call getInstance() internally in FhirSettings
2023-04-19 17:18:29 -04:00
James Agnew 2fd0a07d9f Return ID part when FhirPath expression result is converted to string 2023-04-18 09:07:57 -04:00
Grahame Grieve 2d7dfc1ee9 remove spurious debugging code 2023-04-18 09:41:58 +08:00
Grahame Grieve cdadde108f fix problem with leaf rendering in profile driven renderer 2023-04-18 09:41:44 +08:00
Grahame Grieve ec84f6aa0b fix minor issues in terminology engine 2023-04-18 09:41:28 +08:00
Grahame Grieve 02bd1d8ce7 more fixing for language handling issues 2023-04-18 09:40:49 +08:00
Grahame Grieve 81d26c5160 work on no-network-access mode 2023-04-18 09:39:59 +08:00
dotasek 9530f40f9c
Fix SimpleWorkerContextTests, ignore ExternalTerminologyServiceTests (#1217) 2023-04-14 12:00:44 -04:00
Grahame Grieve c9416e9a56 Merge remote-tracking branch 'origin/master' 2023-04-14 18:01:18 +10:00
Grahame Grieve 6ac00b8c68 rework terminology interface 2023-04-14 17:59:06 +10:00
Amir Toosi b09e536387
Fix HumanName getNameAsSingleString never returning text element (#1207)
* Fix HumanName getNameAsSingleString never returning text element

* Add test + gentle rename in joinStringsSpaceSeparated

* removed unused variable from unit test. added fix for getNameAsSingleString to r5.

* changed variable names in joinStringSpaceSeparated to more meaningful names

* Add tests and fixes for dstu2016may, dstu3, and r4b + gentle refactor

---------

Co-authored-by: dotasek <david.otasek@smilecdr.com>
2023-04-12 14:31:58 -04:00
dotasek 8ba4d75451
Import original test, and fix with renamed method (#1173) 2023-04-12 13:22:13 -04:00
Grahame Grieve 03eb6e7bf0 more work doing terminology server testing 2023-04-08 15:06:51 +10:00
Grahame Grieve 730a199f7a fix R4/R5 conversion issues 2023-04-08 15:06:09 +10:00
Grahame Grieve 7d4cb4b5a2 Add support for CodeSystem supplements and correctly processing extensions when doing expansions 2023-04-03 20:47:23 +10:00
Grahame Grieve 548284fcda rework language handling again 2023-04-02 23:08:17 +10:00
Grahame Grieve 0188fcedd1 fix NPE in requirements renderer 2023-04-02 23:07:52 +10:00
Grahame Grieve 42a9e47379 Add terminology service tests 2023-04-02 23:07:34 +10:00
Grahame Grieve 0bbff8d14d rework package cache manager - add testing mode 2023-04-02 23:06:29 +10:00
Grahame Grieve 4966731195 Add link to questionnaire rendering questionnaireResponse 2023-04-01 07:33:09 +11:00
Grahame Grieve 9e98128eee Fix access violation rendering questionnaire 2023-04-01 07:32:45 +11:00