- Remove unused root .env and .env.example files (not referenced by any code)
- Update configuration.md with comprehensive config file documentation
- Add configuration overview table with setup instructions and auto-generation info
- Consolidate specialized-agents.md content into system-components.md
- Update system-components.md with complete AgentCore architecture
- Add detailed sections for AgentCore Runtime, Gateway, and Memory primitives
- Remove cli-reference.md (excessive documentation for limited use)
- Update README.md to reference configuration guide in setup section
- Clean up documentation links and organization
The documentation now provides a clear, consolidated view of the system
architecture and configuration with proper cross-references and setup guidance.