233 lines
7.2 KiB
Mathematica
233 lines
7.2 KiB
Mathematica
ONCOIT ;Hines OIFO/GWB - Miscellaneous Input Transforms ;7/10/96
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;;2.11;ONCOLOGY;**18,19,28,29,33,36,40**;Mar 07, 1995
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;
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NP ;NO PUNCTUATION
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;PATIENT ADDRESS AT DX (165.5,8)
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;CITY/TOWN AT DX (165.5,8.1)
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;POSTAL CODE AT DX (165.5,9)
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S X1=$$STRIP^XLFSTR(X,"!""""#$%&'()*+,-./:;<=>?[>]^_\{|}~`")
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I X'=X1 K X W " Punctuation not allowed" K X1 Q
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S X1=$TR(X,"abcdefghijklmnopqrstuvwxyz","ABCDEFGHIJKLMNOPQRSTUVWXYZ")
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I X'=X1 K X W " Lowercase text not allowed" K X1 Q
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Q
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;
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RNEIT ;REGIONAL NODES EXAMINED (165.5,33)
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I (X=91)!(X=92)!(X=93)!(X=94) K X Q
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S DXDT=$P($G(^ONCO(165.5,D0,0)),U,16)
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I DXDT<2980000 D
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.I X=0 W " No nodes examined" Q
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.I X=97 W " 97 or more nodes examined" Q
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.I X=98 W " Nodes examined, # not specified" Q
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.I X=99 W " Unknown if nodes examined, NA" Q
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I DXDT>2971231 D
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.I X=0 W " No nodes examined" Q
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.I X=90 W " 90 or more nodes examined" Q
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.I X=95 W " No nodes removed, aspiration performed" Q
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.I X=96 W " Node removal as sampling, # unknown" Q
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.I X=97 W " Node removal as dissection, # unknown" Q
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.I X=98 W " Nodes surgically removed, # unknown" Q
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.I X=99 W " Unknown, NA or -, not stated" Q
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Q
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;
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RNPIT ;REGIONAL LYMPH NODES POSITIVE (165.5,32)
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I (X=91)!(X=92)!(X=93)!(X=94)!(X=96) W " Invalid value" K X Q
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I X=0 W " All nodes examined are negative" Q
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I X=90 W " 90 or more nodes are positive" Q
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I X=95 W " Positive aspiration was performed" Q
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I X=97 W " Positive nodes, # not specified" Q
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I X=98 W " No nodes were examined" Q
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I X=99 W " Unknown if nodes +, NA, not stated" Q
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Q
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;
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BP ;BIOPSY PROCEDURE (165.5,141)
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S XCODE=X
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D BPGUCHK^ONCOTNE
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I BPSITE="" K X Q
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S FOUND=0
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F XBP=0:0 S XBP=$O(^ONCO(164,BPSITE,"BP5",XBP)) Q:XBP'>0!(FOUND=1) D
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.I $P(^ONCO(164,BPSITE,"BP5",XBP,0),U,2)=X S X=XBP,FOUND=1 Q
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I FOUND=0 K X Q
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D EN^DDIOL($P(^ONCO(164,BPSITE,"BP5",X,0),U,1))
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K FOUND,XBP Q
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;
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RDIT ;REGIONAL DOSE:cGy (165.5,442)
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I X'?1.5N K X Q
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D NUMIT
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I +X=0 W " No radiation administered"
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I +X=88888 W " NA, brachytherapy/radioisotopes administered"
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I X=99999 W " Dose unknown/unknown if administered"
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Q
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;
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;1998 Prostate Cancer Study
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;
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PSA ;Item 14. Results of Most Recent Pre-Treatment Prostate Specific
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; Antigen (PSA) Test
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;RESULTS OF PSA TEST (PR98) (165.5,684)
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I X'?1.3N&(X'?0.3N1"."1N) K X Q
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I X'["." S X=X_".0"
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I $P(X,".",1)="" S X="000"_X
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I $L($P(X,".",1))=1 S X="00"_X
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I $L($P(X,".",1))=2 S X="0"_X
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Q
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;
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LP25 ;Item 25. Gleason's Score for Biopsy, Local Resection, or Simple
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; Prostatectomy
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;LESSER PATTERN (02-40) (165.5,623.2)
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I +X'=X!(X=6)!(X=7)!(X=8)!($L(X)>1)!(X<0)!(X?.E1"."1N.N) K X Q
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S PP=$P($G(^ONCO(165.5,D0,"PRO2")),U,43)
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I PP>0,PP<6,(X=0)!(X=9) K X
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K PP
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Q
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;
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LP26 ;Item 26. Gleason's Score for Radical Prostatectomy
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;LESSER PATTERN (50-70) (165.5,623.5)
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I +X'=X!(X=6)!(X=7)!(X=8)!($L(X)>1)!(X<0)!(X?.E1"."1N.N) K X Q
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S PP=$P($G(^ONCO(165.5,D0,"PRO2")),U,46)
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I PP>0,PP<6,(X=0)!(X=9) K X
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K PP
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Q
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;
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;2001 Gastric Cancers PCE Study
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;
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AC ;Item 3. Alcohol Consumption
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;GAS ALCOHOL COMSUMPTION (165.5,1501)
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D NUMIT
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I +X=0 W " Never consumed alcohol"
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I X=97 W " 97 or more drinks per week"
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I X=98 W " Yes, number of drinks unknown"
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I X=99 W " Not documented"
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Q
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;
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LS ;Item 16. Laboratory Studies
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;GAS LDH (IU/L) (165.5,1540)
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;GAS CEA (ng/ml) (165.5,1541)
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;GAS CA125 (U/ml) (165.5,1542)
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;GAS BETA2 MICROGLOBULIN (165.5,1543)
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;GAS URINARY 5-HIAA (mg/24hr) (165.5,1544)
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D FRACIT
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I +X=0 W " Test not administered"
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I X=8888.8 W " Test administered but results unknown"
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I X=9999.9 W " Not documented"
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Q
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;
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IRTD ;Item 40. Intra-operative Radiation Therapy, Dose (cCy)
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;GAS INTRA-OPERATIVE RADIATION (165.5,1567)
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D NUMIT
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I +X=0 W " Not administered"
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I X=88888 W " Administered, dose not documented"
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I X=99999 W " Not documented"
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Q
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;
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;2001 Lung (NSCLC) Cancers PCE Study
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;
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PFT ;Item 7. Pulmonary Function Tests
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;LNG FVC (165.5,1407
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;LNG FEV (165.5,1407.1)
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I $L($P(X,".",1))>ONCL K X Q
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D FRACIT
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I X="0.00" W " Test not done" Q
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I X=9.98 W " Test done, results not documented" Q
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I X=9.99 W " Not documented if test performed" Q
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Q
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;
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RE ;Item 9. Radiological Evaluation
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;LNG TUMOR SIZE (BONE SCAN) (165.5,1409.4)
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;LNG NUM OF TUMORS (BONE SCAN) (165.5,1409.5)
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;LNG TUMOR SIZE (CHEST CT) (165.5,1410.4)
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;LNG NUM OF TUMORS (CHEST CT) (165.5,1410.5)
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;LNG TUMOR SIZE (BRAIN CT) (165.5,1411.4)
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;LNG NUM OF TUMORS (BRAIN CT) (165.5,1411.5)
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;LNG TUMOR SIZE (CHEST MRI) (165.5,1412.4)
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;LNG NUM OF TUMORS (CHEST MRI) (165.5,1412.5)
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;LNG TUMOR SIZE (BRAIN MRI) (165.5,1413.4)
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;LNG NUM OF TUMORS (BRAIN MRI) (165.5,1413.5)
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;LNG TUMOR SIZE (PET SCAN) (165.5,1414.4)
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;LNG NUM OF TUMORS (PET SCAN) (165.5,1414.5)
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;LNG TUMOR SIZE (CHEST XRAY) (165.5,1415.4)
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;LNG NUM OF TUMORS (CHEST XRAY) (165.5,1415.5)
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D NUMIT
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I +X=0 W " Test not performed"
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I X=999!(X=99) W " Test performed, not documented"
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Q
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;
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TPBR ;Item 17. Total Peri-Operative Blood Replacement
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;LNG PERI-OPERATIVE BLOOD REP (165.5,1420)
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D NUMIT
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I +X=0 W " No transfusion performed"
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I X=98 W " Transfusion performed, units not documented"
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I X=99 W " Not recorded if transfusion done"
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Q
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;
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;2001 Lung (NSCLC) Cancers PCE Study
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;2001 Gastric Cancers PCE Study
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;
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DTU ;Item 2. Duration of Tobacco Use
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;LNG DURATION OF TOBACCO USE (165.5,1401)
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;Item 4. Duration of Tobacco Use
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;GAS DURATION OF TOBACCO USE (165.5,1572)
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D NUMIT
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I +X=0 W " Never used tobacco"
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I X=99 W " Not documented"
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Q
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;
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GYGR ;YEAR OF GASTRIC RESECTION I.T.
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I +X=0 W " No prior gastric resection"
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I X=9999 W " Not documented"
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Q
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GTOBR ;GASTRIC TOTAL OPERATIVE BLOOD REPLACEMENT I.T.
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I X="00" W " No transfusion"
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I X="98" W " Transfusion, # of units not documented"
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I X="99" W " Not recorded if transfusion done"
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Q
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HVBT ;Item 16. Hct (Hematocrit) Values Before Transfusion
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;LNG HCT VAL BEFORE TRANSFUSION (165.5,1430)
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;Item 33. Hct (Hematocrit) Values Before Transfusion
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;GAS HCT VAL BEFORE TRANSFUSION (165.5,1562)
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D FRACIT
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I +X=0 W " No transfusion"
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I X=99.9 W " Not documented"
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Q
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;
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BD ;Item 23. Boost Dose (cCy)
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;LNG BOOST DOSE (cGy) (165.5,1422)
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;Item 39. Boost Dose (cCy)
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;GAS BOOST DOSE (cGy) (165.5,1575)
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D NUMIT
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I +X=0 W " Not administered"
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I X=99999 W " Not documented"
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Q
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;
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DMCM ;Item 12. Distance in Millimeters to Closest Margin
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;LNG PROXIMAL MARGIN (165.5,1429)
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;LNG DISTAL MARGIN (165.5,1429.1)
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D NUMIT
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I +X=0 W " No free margins"
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I X=998 W " NA, no surgery of primary site"
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I X=999 W " Unknown, not documented"
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Q
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;
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EFM ;Item 30. Extent of Free Margin
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;GAS PROXIMAL MARGIN (165.5,1558)
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;GAS DISTAL MARGIN (165.5,1558.1)
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D NUMIT
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I +X=0 W " No free margins"
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I X=999 W " Not documented"
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Q
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;
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NUMIT ;Pad with leading zeros
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S ONCZZZ="000000000",ONCXLEN=$L(X) I ONCL=ONCXLEN Q
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S ONCPNUM=ONCL-ONCXLEN,ONCPAD=$E(ONCZZZ,1,ONCPNUM),X=ONCPAD_X
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K ONCZZZ,ONCXLEN,ONCPNUM,ONCPAD
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Q
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;
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FRACIT ;Pad with leading zeros, 1 decimal place
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I X[".",$P(X,".",2)="" S X=+X
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S ONCZZZ="000000000",ONCNUM=$P(X,".",1),ONCFRAC=$P(X,".",2)
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S ONCNLEN=$L(ONCNUM),ONCFLEN=$L(ONCFRAC)
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S ONCNPD=ONCL-ONCNLEN,ONCFPD=ONCF-ONCFLEN
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S ONCPADN=$E(ONCZZZ,1,ONCNPD),ONCPADF=$E(ONCZZZ,1,ONCFPD)
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I ONCFRAC="" S ONCPADF="."_ONCPADF
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S X=ONCPADN_X_ONCPADF
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K ONCZZZ,ONCNUM,ONCFRAC,ONCNLEN,ONCFLEN,ONCNPD,ONCFPD,ONCPADN,ONCPADF
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Q
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