Extra NDC resolution functions
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@ -1,353 +1,360 @@
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C0CRXNLK ; VEN/SMH - RxNorm Lookup Utilities ;2014-07-22 2:27 PM
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;;2.3;RXNORM FOR VISTA;;Jul 22, 2014;Build 10
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;(c) Sam Habiel 2013
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; See accompanying license. Don't use otherwise.
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;
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S IO=$P
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N DIQUIET S DIQUIET=1
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D DT^DICRW
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D EN^XTMUNIT($T(+0),1)
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QUIT
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;
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EXIST(RXN) ; $$ Public - Does this RxNorm CUI exist?
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; Input: RxNorm CUI by value
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; Output: Extrinsic
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Q ''$D(^C0CRXN(176.001,"B",RXN))
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;
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GCN2RXN(GCN) ; $$ Public - Get RxNorm CUI using GCN
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; Input: GCN by Value
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; Output: Extrinsic
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S GCN=$$RJ^XLFSTR(GCN,6,0) ; pad to six digits by zeros (123 becomes 000123)
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N IEN S IEN=$O(^C0CRXN(176.001,"STC","NDDF","CDC",GCN,"")) ; Get Entry
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Q ^(IEN)
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;
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GCN2RXNT ; @TEST - Test Get RxNorm CUI using GCN
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Q:'$D(^C0CRXN(176.001,"STC","NDDF"))
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N L F L=1:1 N LN S LN=$T(GCN2RXND+L) Q:LN["<<END>>" Q:LN="" D
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. N GCN S GCN=$P(LN,";",3)
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. N RXN S RXN=$P(LN,";",4)
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. D CHKEQ^XTMUNIT($$GCN2RXN(GCN),RXN,"Translation from GCN to RXCUI failed")
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QUIT
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;
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GCN2RXND ; @DATA - Data for Tests ;;GCN;EXPECTED RXNCUI
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;;16033;991632
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;;8208;310429
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;;1275;628953
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;;18;197604
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;;346;884173
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;;<<END>>
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;
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;
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;
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RXN2GCN(RXNCUI) ; $$ Public - Get GCN(s) given an RxNorm Number
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; Input: RXNCUI by Value
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; Output: Caret delimited Extrinsic
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N GCNS S GCNS=""
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N I S I=""
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F S I=$O(^C0CRXN(176.001,"STX","NDDF","CDC",RXNCUI,I)) Q:I="" S GCNS=GCNS_+^(I)_U ; + b/c we want the GCN w/o leading zeros
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S GCNS=$E(GCNS,1,$L(GCNS)-1) ; remove trailing ^
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Q GCNS
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;
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RXN2GCNT ; @TEST - Test Get GCN from RXNCUI
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Q:'$D(^C0CRXN(176.001,"STX","NDDF"))
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N L F L=1:1 N LN S LN=$T(RXN2GCND+L) Q:LN["<<END>>" Q:LN="" D
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. N RXN S RXN=$P(LN,";",3)
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. N GCN S GCN=$P(LN,";",4)
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. D CHKEQ^XTMUNIT($$RXN2GCN(RXN),GCN,"Translation from RXCUI to GCN failed")
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QUIT
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;
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;
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RXN2GCND ; @DATA - Data for Tests ;;RXNORM CUI;Expected GCN; Human Readable Drug name for dear reader
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;;998689;5145;Acetabulol 200mg tab
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;;745679;5037;Albuterol Inhaler
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;;197320;2536;Allopurinol 300mg tab
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;;993691;3948^46236;Bupropion 75mg tab
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;;197591;3768;Diazepam 5mg tab
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;;<<END>>
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;
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;
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;
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RXN2VUI(RXNCUI) ; $$ Public - Get VUID(s) for given RXNCUI for Clinical Drug
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; Input: RXNCUI by Value
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; Output: Caret delimited extrinsic. Should not be more than 2 entries.
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N C0PVUID S C0PVUID=""
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N I S I=""
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F S I=$O(^C0CRXN(176.001,"STX","VANDF","CD",RXNCUI,I)) Q:I="" S C0PVUID=C0PVUID_^(I)_U
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S C0PVUID=$E(C0PVUID,1,$L(C0PVUID)-1) ; remove trailing ^
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; TODO: Return only the quantified form using:
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; I $O(^C0CRXN(176.005,"RXCUIREL",RXN,"has_quantified_form","")) N QF S QF=$O(^("")) Q $O(^C0CRXN(176.001,"RXN2VUID",QF,""))
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Q C0PVUID
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;
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RXN2VUIT ; @TEST - Get VUIDs given RxNorm values
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N L F L=1:1 N LN S LN=$T(RXN2VUID+L) Q:LN["<<END>>" Q:LN="" D
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. N RXN S RXN=$P(LN,";",3)
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. N VUIDS S VUIDS=$P(LN,";",4)
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. D CHKEQ^XTMUNIT($$RXN2VUI(RXN),VUIDS,"Translation from RXNCUI to VUID failed")
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QUIT
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;
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RXN2VUID ; @DATA - Data items for previous test
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;;991632;4006455
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;;310429;4002369^4013941
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;;628953;4000874^4000856^4013966^4015798^4015799
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;;197604;4003335^4015937
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;;884173;4002469^4013919
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;;<<END>>
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;
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;
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;
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VUI2VAP(VUID) ; $$ Public - Get VA Product IEN(s) from VUID
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; Input VUID by Value
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; Output: Extrinsic
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D FIND^DIC(50.68,,"@","QP",VUID,,"AVUID") ; Find all in VUID index
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N O S O="" ; Output
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N I F I=0:0 S I=$O(^TMP("DILIST",$J,I)) Q:'I S O=O_^(I,0)_U ; Concat results together
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S O=$E(O,1,$L(O)-1) ; remove trailing ^
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Q O
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;
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VUI2VAPT ; @TEST - Get VA Product IEN from VUID
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N L F L=1:1 N LN S LN=$T(VUI2VAPD+L) Q:LN["<<END>>" Q:LN="" D
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. N VUID S VUID=$P(LN,";",3)
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. N VAP S VAP=$P(LN,";",4)
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. D CHKEQ^XTMUNIT($$VUI2VAP(VUID),VAP,"Translation from VUID to VA PRODUCT failed")
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QUIT
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;
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VUI2VAPD ; @DATA - Data for above test
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;;4006455;5932
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;;4002369;1784
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;;4000874;252
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;;4003335;2756
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;;4002469;1884
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;;4009488;9046^10090
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;;<<END>>
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;
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;
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;
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VAP2MED(VAPROD) ; $$ Public - Get Drug(s) using VA Product IEN
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; Un-Unit-testable: Drug files differ between sites.
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; Input: VA Product IEN By Value
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; OUtput: Caret delimited extrinsic
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; This code inspired from PSNAPIs
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; WHY THE HELL WOULD I USE A TEXT INDEX?
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; It's my only option. Creating new xrefs on the drug file doesn't help
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; as they are not filled out when adding a drug (IX[ALL]^DIK isn't called).
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N MEDS S MEDS="" ; result
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N PN,PN1 ; Product Name, abbreviated product name.
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S PN=$P(^PSNDF(50.68,VAPROD,0),"^"),PN1=$E(PN,1,30)
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N P50 S P50=0 ; looper through VAPN index which is DRUG file entry
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F S P50=$O(^PSDRUG("VAPN",PN1,P50)) Q:'P50 D ; for each text match
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. I $P(^PSDRUG(P50,"ND"),"^",3)=VAPROD S MEDS=$G(MEDS)_P50_U ; check that the VA PRODUCT pointer is the same as ours.
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S:MEDS MEDS=$E(MEDS,1,$L(MEDS)-1) ; remove trailing ^
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Q MEDS
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;
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;
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RXN2MEDS(RXNCUI) ; $$ Public - Convert RxNorm value to currently existing drugs in File 50.
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; Input: SCD RXNCUI
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; Output; Caret delimited extrinsic
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; Un-unit testable
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N VUIDS S VUIDS=$$RXN2VUI(RXNCUI) ; Get VUID from RXNCUI (multiple VUIDs per CUI)
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Q:'VUIDS ""
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N MEDS S MEDS=""
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N DONE S DONE=0
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N I F I=1:1:$L(VUIDS,U) D Q:DONE
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. N VUID S VUID=$P(VUIDS,U,I)
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. N VAPRODS S VAPRODS=$$VUI2VAP(VUID) ; Get VA Product from VUID (multiple products per VUID)
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. I '$L(VAPRODS) S $ECODE=",U-NO-VA-PRODUCT-CORRUPT-NDF," ; MUST EXIST. Every VUID must have a product to go with it.
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. N J F J=1:1:$L(VAPRODS,U) D Q:DONE
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. . N VAPROD S VAPROD=$P(VAPRODS,U,J)
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. . S MEDS=$$VAP2MED(VAPROD) ; Get Meds from VA Product
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. . I $L(MEDS) S DONE=1
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QUIT MEDS
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;
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FDI2RXN(BASE) ; $$ Public - Get RxNorm CUI for FDB Ingredient/Base
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; ^C0CRXN(176.001,"STC","NDDF","IN","014739",1000870)=1362160
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; Input: BASE By Value
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; Output: RxNorm CUI
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S BASE=$$RJ^XLFSTR(BASE,6,0) ; pad to six digits by zeros (123 becomes 000123)
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N IEN S IEN=$O(^C0CRXN(176.001,"STC","NDDF","IN",BASE,"")) Q ^(IEN)
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;
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FDI2RXNT ; @TEST - Test Get RxNorm CUI for FDB Ingredient/Base
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Q:'$D(^C0CRXN(176.001,"STC","NDDF"))
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D CHKEQ^XTMUNIT($$FDI2RXN(14739),1362160,"$$FDI2RXN failed")
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QUIT
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;
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;
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;
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RXN2VIN(RXNCUI) ; $$ Public - Get VUID Ingredient for RxNorm CUI
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; ^C0CRXN(176.001,"STX","VANDF","IN",1366467,1008555)=4031768
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; Input: RXNCUI By Value
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; Output: VUID
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N IEN S IEN=$O(^C0CRXN(176.001,"STX","VANDF","IN",RXNCUI,"")) Q ^(IEN)
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;
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RXN2VINT ; @TEST - Test Get VUID Ingredient for RxNorm CUI
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D CHKEQ^XTMUNIT($$RXN2VIN(1366467),4031768,"$$RXN2VIN failed")
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QUIT
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;
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;
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;
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VIN2VAG(VUID) ; $$ Public - Get VA Generic for VUID Ingredient
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; Input: VUID By Value
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; Output: IEN^VA Generic Name (i.e. .01 field value)
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N C0PIEN S C0PIEN=$$FIND1^DIC(50.6,"","QX",VUID,"AVUID")
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N C0P01 S C0P01=$$GET1^DIQ(50.6,C0PIEN,.01)
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Q C0PIEN_"^"_C0P01
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;
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VIN2VAGT ; @TEST - Test Get VA Generic for VUID Ingredient
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D CHKEQ^XTMUNIT(+$$VIN2VAG(4023636),2832,"$$VIN2VAG failed")
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QUIT
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;
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;
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;
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FDI2VAG(BASE) ; $$ Public - Get VA Generic for FDB Ingredient/Base
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; TODO:Not tested...
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; Input: BASE By Value
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; Output: IEN^VA Generic Name (i.e. .01 field value)
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Q $$VIN2VAG($$RXN2VIN($$FDI2RXN(BASE)))
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;
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VIN2DIN(VUID) ; $$ Public - Get Drug Ingredient for VUID Ingredient
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; TODO:Not tested...
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; Input: VUID By Value
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; Output: IEN^Drug Ingredient Name (i.e. .01 field value)
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N C0PIEN S C0PIEN=$$FIND1^DIC(50.416,"","QX",VUID,"AVUID")
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N C0P01 S C0P01=$$GET1^DIQ(50.416,C0PIEN,.01)
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Q C0PIEN_"^"_C0P01
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;
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FDI2DIN(BASE) ; $$ Public - Get Drug Ingredient for FDB Ingredient/Base
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; TODO:Not tested...
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; Input: BASE By Value
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; Output: IEN^Drug Ingredient Name (i.e. .01 field value)
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Q $$VIN2DIN($$RXN2VIN($$FDI2RXN(BASE)))
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;
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VUI2RXN(VUID) ; $$ Public - Get RXNCUI for VUID (any VUID type)
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; Input: VUID By Value
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; Output: RXNCUIs delimited by ^
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; Get all entries whose code is the VUID and are in the VA NDF which are clinical drugs
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D FIND^DIC(176.001,,"@;.01","PQX",VUID,,"CODE","I $P(^(0),U,12,13)=""VANDF^CD""")
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; Deserialise it into a single string
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; ^TMP("DILIST",4844,0)="1^*^0^"
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; ^TMP("DILIST",4844,0,"MAP")="IEN^.01"
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; ^TMP("DILIST",4844,1,0)="1006351^1364462"
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N RXNS S RXNS=""
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N I F I=0:0 S I=$O(^TMP("DILIST",$J,I)) Q:'I S RXNS=RXNS_$P(^(I,0),U,2)_U
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S RXNS=$E(RXNS,1,$L(RXNS)-1)
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QUIT RXNS
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;
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VUI2GCN(VUID) ; $$ Public - Get GCNs for a given VUID (any VUID type)
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; Input: VUID by Value
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; Output: GCNs delimited by ^
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; TODO: Unit Test
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N RXNS S RXNS=$$VUI2RXN(VUID)
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Q:RXNS="" "" ; VUID not a drug or ingredient (can be food)
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N GCNS S GCNS=""
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N I F I=1:1:$L(RXNS,U) S GCNS=GCNS_$$RXN2GCN($P(RXNS,U,I))_U
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S GCNS=$E(GCNS,1,$L(GCNS)-1)
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QUIT GCNS
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;
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MED2RXN(DA) ; $$ Public - Get RxNorm CUI for Drug
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; Input: DA - Medication IEN
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; Output: RXNCUIs delimited by ^
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N ND S ND=$G(^PSDRUG(DA,"ND")) ; ND Node
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N VAP S VAP=$P(ND,U,3) ; VA Product Pointer
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Q:'VAP "" ; quit if empty
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N VUID S VUID=+^PSNDF(50.68,VAP,"VUID") ; Get VUID
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I 'VUID S $EC=",U1," ; Must exist
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Q $$VUI2RXN(VUID)
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;
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MED2SCDN(DA) ; $$ Public - Medication to Semantic Clinical Drug Name
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; Input: DA - Medication IEN
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; Output: The Canonical Semantic Clinical Drug name
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N RXNCUI S RXNCUI=$$MED2RXN(DA)
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Q:'RXNCUI ""
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N IEN S IEN=$O(^C0CRXN(176.001,"STC","RXNORM","SCD",RXNCUI,"")) ; Let's try generic drug
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I 'IEN S IEN=$O(^C0CRXN(176.001,"STC","RXNORM","SBD",RXNCUI,"")) ; Let's try non-bioequivalent Brands then
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I 'IEN S IEN=$O(^C0CRXN(176.001,"STC","RXNORM","GPCK",RXNCUI,"")) ; Let's try a Generic combination package
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I 'IEN S IEN=$O(^C0CRXN(176.001,"STC","RXNORM","SCDF",RXNCUI,"")) ; Let's try a Clinical Drug and Form (Like Metamucil)
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Q:'IEN "" ; Apparently not every VUID has a corresponding RXNCUI SCD.
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Q $P(^C0CRXN(176.001,IEN,0),U,15)
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;
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RXN2NDI(RXNCUI) ; $$ Public - Get NDDF Ingredient for RXNCUI
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; Input: RXNCUI By Value
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; Output: NDDF Base code
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; TODO:Not tested...
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N IEN S IEN=$O(^C0CRXN(176.001,"STX","NDDF","IN",RXNCUI,"")) Q ^(IEN)
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;
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VIN2NDI(VUID) ; $$ Public - Get NDDF Ingredient for VUID
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; NB: WILL ONLY WORK IF VUID IS AN INGREDIENT VUID, NOT A CLINICAL DRUG
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; Input: VUID By Value
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; Output: NDDF Base code
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; TODO:Not tested...
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Q $$RXN2NDI($$VUI2RXN(VUID))
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;
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; ---
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;
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NDC2RXN(NDC) ; $$ Public - Get RxCUI given the NDC
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; NB: Will only work if passed NDC is in 5-4-2 format.
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; Input: NDC By Value in 5-4-2 Format
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; Output: RxNorm Code.
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S NDC=$TR(NDC,"-")
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N IEN S IEN=$O(^C0CRXN(176.002,"ASAA","RXNORM","NDC",NDC,"")) Q ^(IEN)
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;
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NDC2RXNT ; @TEST - Test Get RxCUI given the NDC
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D CHKEQ^XTMUNIT($$NDC2RXN("30142-0917-71"),198439,"$$NDC2RXN failed")
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QUIT
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;
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; ---
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;
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ISBRAND(RXN) ; $$ Public - Is this RxCUI for a brand drug?
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; Input: RxCUI
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; Output: 0 or 1
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Q ''$D(^C0CRXN(176.001,"STC","RXNORM","SBD",RXN))
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ISBRANDT ; @TEST - Test Is this RxCUI for a brand drug?
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D CHKEQ^XTMUNIT($$ISBRAND(205535),1,"$$ISBRAND failed") ; Brand Prozac
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D CHKEQ^XTMUNIT($$ISBRAND(310384),0,"$$ISBRAND failed") ; Generic Fluoxetine
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QUIT
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;
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; ---
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;
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BR2GEN(RXN) ; $$ Public - Convert Brand RxCUI to Generic RxCUI (many to 1)
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; Input: RxCUI of Brand
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; Output: RxCUI of Generic
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Q $O(^C0CRXN(176.005,"B",RXN,"has_tradename",""))
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BR2GENT ; @TEST - Test Convert Brand RxCUI to Generic RxCUI (many to 1)
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D CHKEQ^XTMUNIT($$BR2GEN(205535),310384,"$$BR2GEN failed")
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QUIT
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;
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; ---
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;
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GEN2BR(RXN) ; $$ Public - Convert Generic RxCUI to Brand RxCUIs (1 to many).
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N RTN S RTN="" ; Return
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N I S I="" F S I=$O(^C0CRXN(176.005,"B",RXN,"tradename_of",I)) Q:'I S RTN=RTN_I_U
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S RTN=$E(RTN,1,$L(RTN)-1)
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Q RTN
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;
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GEN2BRT ; @TEST - Test Convert Generic RxCUI to Brand RxCUIs (1 to many).
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D CHKTF^XTMUNIT($$GEN2BR(310384)[205535,"$$GEN2BR failed")
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QUIT
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;
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; ---
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;
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RXN2BNS(RXN) ; $$ Public - Get all Brand Names associated with an RXN
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N BNS S BNS=""
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I $$ISBRAND(RXN) S RXN=$$BR2GEN(RXN)
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N ALLBN S ALLBN=$$GEN2BR(RXN)
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Q:ALLBN="" ""
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N BNNO F BNNO=1:1:$L(ALLBN,U) D
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. N EACHBN S EACHBN=$P(ALLBN,U,BNNO)
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. N BNRXCUI S BNRXCUI=$O(^C0CRXN(176.005,"B",EACHBN,"ingredient_of",""))
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. Q:BNRXCUI=""
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. N BNIEN S BNIEN=$O(^C0CRXN(176.001,"B",BNRXCUI,""))
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. S BNS=BNS_$P(^C0CRXN(176.001,BNIEN,0),U,15)_U
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QUIT $E(BNS,1,$L(BNS)-1)
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RXN2BNST ; @TEST - Test Get all Brand Names associated with an RXN
|
||||
D CHKTF^XTMUNIT($$RXN2BNS(205535)["Prozac","$$RXN2BNS failed")
|
||||
QUIT
|
||||
;
|
||||
; ---
|
||||
;
|
||||
RXN2NDC(RXN) ; Get NDC codes for RxNorm code
|
||||
N NDCS S NDCS=""
|
||||
N I F I=0:0 S I=$O(^C0CRXN(176.002,"ASAR","RXNORM","NDC",RXN,I)) Q:'I S NDCS=NDCS_^(I)_"^"
|
||||
S $E(NDCS,$L(NDCS))=""
|
||||
QUIT NDCS
|
||||
RXN2NDCT ; @TEST - Test Get NDC codes for RxNorm code
|
||||
D CHKTF^XTMUNIT($$RXN2NDC(197379)["^"_16714003309,"$$RXN2NDC failed")
|
||||
QUIT
|
||||
C0CRXNLK ; VEN/SMH - RxNorm Lookup Utilities ;2014-07-22 2:27 PM
|
||||
;;2.3;RXNORM FOR VISTA;;Jul 22, 2014;Build 16
|
||||
;(c) Sam Habiel 2013
|
||||
; See accompanying license. Don't use otherwise.
|
||||
;
|
||||
S IO=$P
|
||||
N DIQUIET S DIQUIET=1
|
||||
D DT^DICRW
|
||||
D EN^XTMUNIT($T(+0),1)
|
||||
QUIT
|
||||
;
|
||||
EXIST(RXN) ; $$ Public - Does this RxNorm CUI exist?
|
||||
; Input: RxNorm CUI by value
|
||||
; Output: Extrinsic
|
||||
Q ''$D(^C0CRXN(176.001,"B",RXN))
|
||||
;
|
||||
GCN2RXN(GCN) ; $$ Public - Get RxNorm CUI using GCN
|
||||
; Input: GCN by Value
|
||||
; Output: Extrinsic
|
||||
S GCN=$$RJ^XLFSTR(GCN,6,0) ; pad to six digits by zeros (123 becomes 000123)
|
||||
N IEN S IEN=$O(^C0CRXN(176.001,"STC","NDDF","CDC",GCN,"")) ; Get Entry
|
||||
Q ^(IEN)
|
||||
;
|
||||
GCN2RXNT ; @TEST - Test Get RxNorm CUI using GCN
|
||||
Q:'$D(^C0CRXN(176.001,"STC","NDDF"))
|
||||
N L F L=1:1 N LN S LN=$T(GCN2RXND+L) Q:LN["<<END>>" Q:LN="" D
|
||||
. N GCN S GCN=$P(LN,";",3)
|
||||
. N RXN S RXN=$P(LN,";",4)
|
||||
. D CHKEQ^XTMUNIT($$GCN2RXN(GCN),RXN,"Translation from GCN to RXCUI failed")
|
||||
QUIT
|
||||
;
|
||||
GCN2RXND ; @DATA - Data for Tests ;;GCN;EXPECTED RXNCUI
|
||||
;;16033;991632
|
||||
;;8208;310429
|
||||
;;1275;628953
|
||||
;;18;197604
|
||||
;;346;884173
|
||||
;;<<END>>
|
||||
;
|
||||
;
|
||||
;
|
||||
RXN2GCN(RXNCUI) ; $$ Public - Get GCN(s) given an RxNorm Number
|
||||
; Input: RXNCUI by Value
|
||||
; Output: Caret delimited Extrinsic
|
||||
N GCNS S GCNS=""
|
||||
N I S I=""
|
||||
F S I=$O(^C0CRXN(176.001,"STX","NDDF","CDC",RXNCUI,I)) Q:I="" S GCNS=GCNS_+^(I)_U ; + b/c we want the GCN w/o leading zeros
|
||||
S GCNS=$E(GCNS,1,$L(GCNS)-1) ; remove trailing ^
|
||||
Q GCNS
|
||||
;
|
||||
RXN2GCNT ; @TEST - Test Get GCN from RXNCUI
|
||||
Q:'$D(^C0CRXN(176.001,"STX","NDDF"))
|
||||
N L F L=1:1 N LN S LN=$T(RXN2GCND+L) Q:LN["<<END>>" Q:LN="" D
|
||||
. N RXN S RXN=$P(LN,";",3)
|
||||
. N GCN S GCN=$P(LN,";",4)
|
||||
. D CHKEQ^XTMUNIT($$RXN2GCN(RXN),GCN,"Translation from RXCUI to GCN failed")
|
||||
QUIT
|
||||
;
|
||||
;
|
||||
RXN2GCND ; @DATA - Data for Tests ;;RXNORM CUI;Expected GCN; Human Readable Drug name for dear reader
|
||||
;;998689;5145;Acetabulol 200mg tab
|
||||
;;745679;5037;Albuterol Inhaler
|
||||
;;197320;2536;Allopurinol 300mg tab
|
||||
;;993691;3948^46236;Bupropion 75mg tab
|
||||
;;197591;3768;Diazepam 5mg tab
|
||||
;;<<END>>
|
||||
;
|
||||
;
|
||||
;
|
||||
RXN2VUI(RXNCUI) ; $$ Public - Get VUID(s) for given RXNCUI for Clinical Drug
|
||||
; Input: RXNCUI by Value
|
||||
; Output: Caret delimited extrinsic. Should not be more than 2 entries.
|
||||
N C0PVUID S C0PVUID=""
|
||||
N I S I=""
|
||||
F S I=$O(^C0CRXN(176.001,"STX","VANDF","CD",RXNCUI,I)) Q:I="" S C0PVUID=C0PVUID_^(I)_U
|
||||
S C0PVUID=$E(C0PVUID,1,$L(C0PVUID)-1) ; remove trailing ^
|
||||
; TODO: Return only the quantified form using:
|
||||
; I $O(^C0CRXN(176.005,"RXCUIREL",RXN,"has_quantified_form","")) N QF S QF=$O(^("")) Q $O(^C0CRXN(176.001,"RXN2VUID",QF,""))
|
||||
Q C0PVUID
|
||||
;
|
||||
RXN2VUIT ; @TEST - Get VUIDs given RxNorm values
|
||||
N L F L=1:1 N LN S LN=$T(RXN2VUID+L) Q:LN["<<END>>" Q:LN="" D
|
||||
. N RXN S RXN=$P(LN,";",3)
|
||||
. N VUIDS S VUIDS=$P(LN,";",4)
|
||||
. D CHKEQ^XTMUNIT($P($$RXN2VUI(RXN),U),$P(VUIDS,U),"Translation from RXNCUI to VUID failed")
|
||||
QUIT
|
||||
;
|
||||
RXN2VUID ; @DATA - Data items for previous test
|
||||
;;991632;4006455
|
||||
;;310429;4002369^4013941
|
||||
;;628953;4000874^4000856^4013966^4015798^4015799
|
||||
;;197604;4003335^4015937
|
||||
;;884173;4002469^4013919
|
||||
;;<<END>>
|
||||
;
|
||||
;
|
||||
;
|
||||
VUI2VAP(VUID) ; $$ Public - Get VA Product IEN(s) from VUID
|
||||
; Input VUID by Value
|
||||
; Output: Extrinsic
|
||||
D FIND^DIC(50.68,,"@","QP",VUID,,"AVUID") ; Find all in VUID index
|
||||
N O S O="" ; Output
|
||||
N I F I=0:0 S I=$O(^TMP("DILIST",$J,I)) Q:'I S O=O_^(I,0)_U ; Concat results together
|
||||
S O=$E(O,1,$L(O)-1) ; remove trailing ^
|
||||
Q O
|
||||
;
|
||||
VUI2VAPT ; @TEST - Get VA Product IEN from VUID
|
||||
N L F L=1:1 N LN S LN=$T(VUI2VAPD+L) Q:LN["<<END>>" Q:LN="" D
|
||||
. N VUID S VUID=$P(LN,";",3)
|
||||
. N VAP S VAP=$P(LN,";",4)
|
||||
. D CHKEQ^XTMUNIT($$VUI2VAP(VUID),VAP,"Translation from VUID to VA PRODUCT failed")
|
||||
QUIT
|
||||
;
|
||||
VUI2VAPD ; @DATA - Data for above test
|
||||
;;4006455;5932
|
||||
;;4002369;1784
|
||||
;;4000874;252
|
||||
;;4003335;2756
|
||||
;;4002469;1884
|
||||
;;4009488;9046^10090
|
||||
;;<<END>>
|
||||
;
|
||||
;
|
||||
;
|
||||
VAP2MED(VAPROD) ; $$ Public - Get Drug(s) using VA Product IEN
|
||||
; Un-Unit-testable: Drug files differ between sites.
|
||||
; Input: VA Product IEN By Value
|
||||
; OUtput: Caret delimited extrinsic
|
||||
; This code inspired from PSNAPIs
|
||||
; WHY THE HELL WOULD I USE A TEXT INDEX?
|
||||
; It's my only option. Creating new xrefs on the drug file doesn't help
|
||||
; as they are not filled out when adding a drug (IX[ALL]^DIK isn't called).
|
||||
N MEDS S MEDS="" ; result
|
||||
N PN,PN1 ; Product Name, abbreviated product name.
|
||||
S PN=$P(^PSNDF(50.68,VAPROD,0),"^"),PN1=$E(PN,1,30)
|
||||
N P50 S P50=0 ; looper through VAPN index which is DRUG file entry
|
||||
F S P50=$O(^PSDRUG("VAPN",PN1,P50)) Q:'P50 D ; for each text match
|
||||
. I $P(^PSDRUG(P50,"ND"),"^",3)=VAPROD S MEDS=$G(MEDS)_P50_U ; check that the VA PRODUCT pointer is the same as ours.
|
||||
S:MEDS MEDS=$E(MEDS,1,$L(MEDS)-1) ; remove trailing ^
|
||||
Q MEDS
|
||||
;
|
||||
;
|
||||
RXN2MEDS(RXNCUI) ; $$ Public - Convert RxNorm value to currently existing drugs in File 50.
|
||||
; Input: SCD RXNCUI
|
||||
; Output; Caret delimited extrinsic
|
||||
; Un-unit testable
|
||||
N VUIDS S VUIDS=$$RXN2VUI(RXNCUI) ; Get VUID from RXNCUI (multiple VUIDs per CUI)
|
||||
Q:'VUIDS ""
|
||||
N MEDS S MEDS=""
|
||||
N DONE S DONE=0
|
||||
N I F I=1:1:$L(VUIDS,U) D Q:DONE
|
||||
. N VUID S VUID=$P(VUIDS,U,I)
|
||||
. N VAPRODS S VAPRODS=$$VUI2VAP(VUID) ; Get VA Product from VUID (multiple products per VUID)
|
||||
. I '$L(VAPRODS) S $ECODE=",U-NO-VA-PRODUCT-CORRUPT-NDF," ; MUST EXIST. Every VUID must have a product to go with it.
|
||||
. N J F J=1:1:$L(VAPRODS,U) D Q:DONE
|
||||
. . N VAPROD S VAPROD=$P(VAPRODS,U,J)
|
||||
. . S MEDS=$$VAP2MED(VAPROD) ; Get Meds from VA Product
|
||||
. . I $L(MEDS) S DONE=1
|
||||
QUIT MEDS
|
||||
;
|
||||
FDI2RXN(BASE) ; $$ Public - Get RxNorm CUI for FDB Ingredient/Base
|
||||
; ^C0CRXN(176.001,"STC","NDDF","IN","014739",1000870)=1362160
|
||||
; Input: BASE By Value
|
||||
; Output: RxNorm CUI
|
||||
S BASE=$$RJ^XLFSTR(BASE,6,0) ; pad to six digits by zeros (123 becomes 000123)
|
||||
N IEN S IEN=$O(^C0CRXN(176.001,"STC","NDDF","IN",BASE,"")) Q ^(IEN)
|
||||
;
|
||||
FDI2RXNT ; @TEST - Test Get RxNorm CUI for FDB Ingredient/Base
|
||||
Q:'$D(^C0CRXN(176.001,"STC","NDDF"))
|
||||
D CHKEQ^XTMUNIT($$FDI2RXN(14739),1362160,"$$FDI2RXN failed")
|
||||
QUIT
|
||||
;
|
||||
;
|
||||
;
|
||||
RXN2VIN(RXNCUI) ; $$ Public - Get VUID Ingredient for RxNorm CUI
|
||||
; ^C0CRXN(176.001,"STX","VANDF","IN",1366467,1008555)=4031768
|
||||
; Input: RXNCUI By Value
|
||||
; Output: VUID
|
||||
N IEN S IEN=$O(^C0CRXN(176.001,"STX","VANDF","IN",RXNCUI,"")) Q ^(IEN)
|
||||
;
|
||||
RXN2VINT ; @TEST - Test Get VUID Ingredient for RxNorm CUI
|
||||
D CHKEQ^XTMUNIT($$RXN2VIN(1366467),4031768,"$$RXN2VIN failed")
|
||||
QUIT
|
||||
;
|
||||
;
|
||||
;
|
||||
VIN2VAG(VUID) ; $$ Public - Get VA Generic for VUID Ingredient
|
||||
; Input: VUID By Value
|
||||
; Output: IEN^VA Generic Name (i.e. .01 field value)
|
||||
N C0PIEN S C0PIEN=$$FIND1^DIC(50.6,"","QX",VUID,"AVUID")
|
||||
N C0P01 S C0P01=$$GET1^DIQ(50.6,C0PIEN,.01)
|
||||
Q C0PIEN_"^"_C0P01
|
||||
;
|
||||
VIN2VAGT ; @TEST - Test Get VA Generic for VUID Ingredient
|
||||
D CHKEQ^XTMUNIT(+$$VIN2VAG(4023636),2832,"$$VIN2VAG failed")
|
||||
QUIT
|
||||
;
|
||||
;
|
||||
;
|
||||
FDI2VAG(BASE) ; $$ Public - Get VA Generic for FDB Ingredient/Base
|
||||
; TODO:Not tested...
|
||||
; Input: BASE By Value
|
||||
; Output: IEN^VA Generic Name (i.e. .01 field value)
|
||||
Q $$VIN2VAG($$RXN2VIN($$FDI2RXN(BASE)))
|
||||
;
|
||||
VIN2DIN(VUID) ; $$ Public - Get Drug Ingredient for VUID Ingredient
|
||||
; TODO:Not tested...
|
||||
; Input: VUID By Value
|
||||
; Output: IEN^Drug Ingredient Name (i.e. .01 field value)
|
||||
N C0PIEN S C0PIEN=$$FIND1^DIC(50.416,"","QX",VUID,"AVUID")
|
||||
N C0P01 S C0P01=$$GET1^DIQ(50.416,C0PIEN,.01)
|
||||
Q C0PIEN_"^"_C0P01
|
||||
;
|
||||
FDI2DIN(BASE) ; $$ Public - Get Drug Ingredient for FDB Ingredient/Base
|
||||
; TODO:Not tested...
|
||||
; Input: BASE By Value
|
||||
; Output: IEN^Drug Ingredient Name (i.e. .01 field value)
|
||||
Q $$VIN2DIN($$RXN2VIN($$FDI2RXN(BASE)))
|
||||
;
|
||||
VUI2RXN(VUID) ; $$ Public - Get RXNCUI for VUID (any VUID type)
|
||||
; Input: VUID By Value
|
||||
; Output: RXNCUIs delimited by ^
|
||||
; Get all entries whose code is the VUID and are in the VA NDF which are clinical drugs
|
||||
D FIND^DIC(176.001,,"@;.01","PQX",VUID,,"CODE","I $P(^(0),U,12,13)=""VANDF^CD""")
|
||||
; Deserialise it into a single string
|
||||
; ^TMP("DILIST",4844,0)="1^*^0^"
|
||||
; ^TMP("DILIST",4844,0,"MAP")="IEN^.01"
|
||||
; ^TMP("DILIST",4844,1,0)="1006351^1364462"
|
||||
N RXNS S RXNS=""
|
||||
N I F I=0:0 S I=$O(^TMP("DILIST",$J,I)) Q:'I S RXNS=RXNS_$P(^(I,0),U,2)_U
|
||||
S RXNS=$E(RXNS,1,$L(RXNS)-1)
|
||||
QUIT RXNS
|
||||
;
|
||||
VUI2GCN(VUID) ; $$ Public - Get GCNs for a given VUID (any VUID type)
|
||||
; Input: VUID by Value
|
||||
; Output: GCNs delimited by ^
|
||||
; TODO: Unit Test
|
||||
N RXNS S RXNS=$$VUI2RXN(VUID)
|
||||
Q:RXNS="" "" ; VUID not a drug or ingredient (can be food)
|
||||
N GCNS S GCNS=""
|
||||
N I F I=1:1:$L(RXNS,U) S GCNS=GCNS_$$RXN2GCN($P(RXNS,U,I))_U
|
||||
S GCNS=$E(GCNS,1,$L(GCNS)-1)
|
||||
QUIT GCNS
|
||||
;
|
||||
MED2RXN(DA) ; $$ Public - Get RxNorm CUI for Drug
|
||||
; Input: DA - Medication IEN
|
||||
; Output: RXNCUIs delimited by ^
|
||||
N ND S ND=$G(^PSDRUG(DA,"ND")) ; ND Node
|
||||
N VAP S VAP=$P(ND,U,3) ; VA Product Pointer
|
||||
Q:'VAP "" ; quit if empty
|
||||
N VUID S VUID=+^PSNDF(50.68,VAP,"VUID") ; Get VUID
|
||||
I 'VUID S $EC=",U1," ; Must exist
|
||||
Q $$VUI2RXN(VUID)
|
||||
;
|
||||
MED2SCDN(DA) ; $$ Public - Medication to Semantic Clinical Drug Name
|
||||
; Input: DA - Medication IEN
|
||||
; Output: The Canonical Semantic Clinical Drug name
|
||||
N RXNCUI S RXNCUI=$$MED2RXN(DA)
|
||||
Q:'RXNCUI ""
|
||||
N IEN S IEN=$O(^C0CRXN(176.001,"STC","RXNORM","SCD",RXNCUI,"")) ; Let's try generic drug
|
||||
I 'IEN S IEN=$O(^C0CRXN(176.001,"STC","RXNORM","SBD",RXNCUI,"")) ; Let's try non-bioequivalent Brands then
|
||||
I 'IEN S IEN=$O(^C0CRXN(176.001,"STC","RXNORM","GPCK",RXNCUI,"")) ; Let's try a Generic combination package
|
||||
I 'IEN S IEN=$O(^C0CRXN(176.001,"STC","RXNORM","SCDF",RXNCUI,"")) ; Let's try a Clinical Drug and Form (Like Metamucil)
|
||||
Q:'IEN "" ; Apparently not every VUID has a corresponding RXNCUI SCD.
|
||||
Q $P(^C0CRXN(176.001,IEN,0),U,15)
|
||||
;
|
||||
RXN2NDI(RXNCUI) ; $$ Public - Get NDDF Ingredient for RXNCUI
|
||||
; Input: RXNCUI By Value
|
||||
; Output: NDDF Base code
|
||||
; TODO:Not tested...
|
||||
N IEN S IEN=$O(^C0CRXN(176.001,"STX","NDDF","IN",RXNCUI,"")) Q ^(IEN)
|
||||
;
|
||||
VIN2NDI(VUID) ; $$ Public - Get NDDF Ingredient for VUID
|
||||
; NB: WILL ONLY WORK IF VUID IS AN INGREDIENT VUID, NOT A CLINICAL DRUG
|
||||
; Input: VUID By Value
|
||||
; Output: NDDF Base code
|
||||
; TODO:Not tested...
|
||||
Q $$RXN2NDI($$VUI2RXN(VUID))
|
||||
;
|
||||
; ---
|
||||
;
|
||||
NDC2RXN(NDC) ; $$ Public - Get RxCUI given the NDC
|
||||
; NB: Will only work if passed NDC is in 5-4-2 format.
|
||||
; Input: NDC By Value in 5-4-2 Format
|
||||
; Output: RxNorm Code.
|
||||
S NDC=$TR(NDC,"-")
|
||||
N IEN S IEN=$O(^C0CRXN(176.002,"ASAA","RXNORM","NDC",NDC,"")) Q ^(IEN)
|
||||
;
|
||||
NDC2RXNT ; @TEST - Test Get RxCUI given the NDC & Get RxCUI given the 50.67 NDC
|
||||
D CHKEQ^XTMUNIT($$NDC2RXN("30142-0917-71"),198439,"$$NDC2RXN failed")
|
||||
D CHKEQ^XTMUNIT($$NDC2RXN2("000031868518","VANDF"),996520,"$$NDC2RXN2 failed")
|
||||
QUIT
|
||||
;
|
||||
NDC2RXN2(NDC,SOURCE) ; $$ Public - Get RxCUI given the source
|
||||
; Input: NDC in any format according to source
|
||||
; Output: RxNorm Code
|
||||
I SOURCE="" QUIT ""
|
||||
N IEN S IEN=$O(^C0CRXN(176.002,"ASAA",SOURCE,"NDC",NDC,"")) Q:IEN ^(IEN) Q ""
|
||||
QUIT
|
||||
; ---
|
||||
;
|
||||
ISBRAND(RXN) ; $$ Public - Is this RxCUI for a brand drug?
|
||||
; Input: RxCUI
|
||||
; Output: 0 or 1
|
||||
Q ''$D(^C0CRXN(176.001,"STC","RXNORM","SBD",RXN))
|
||||
ISBRANDT ; @TEST - Test Is this RxCUI for a brand drug?
|
||||
D CHKEQ^XTMUNIT($$ISBRAND(205535),1,"$$ISBRAND failed") ; Brand Prozac
|
||||
D CHKEQ^XTMUNIT($$ISBRAND(310384),0,"$$ISBRAND failed") ; Generic Fluoxetine
|
||||
QUIT
|
||||
;
|
||||
; ---
|
||||
;
|
||||
BR2GEN(RXN) ; $$ Public - Convert Brand RxCUI to Generic RxCUI (many to 1)
|
||||
; Input: RxCUI of Brand
|
||||
; Output: RxCUI of Generic
|
||||
Q $O(^C0CRXN(176.005,"B",RXN,"has_tradename",""))
|
||||
BR2GENT ; @TEST - Test Convert Brand RxCUI to Generic RxCUI (many to 1)
|
||||
D CHKEQ^XTMUNIT($$BR2GEN(205535),310384,"$$BR2GEN failed")
|
||||
QUIT
|
||||
;
|
||||
; ---
|
||||
;
|
||||
GEN2BR(RXN) ; $$ Public - Convert Generic RxCUI to Brand RxCUIs (1 to many).
|
||||
N RTN S RTN="" ; Return
|
||||
N I S I="" F S I=$O(^C0CRXN(176.005,"B",RXN,"tradename_of",I)) Q:'I S RTN=RTN_I_U
|
||||
S RTN=$E(RTN,1,$L(RTN)-1)
|
||||
Q RTN
|
||||
;
|
||||
GEN2BRT ; @TEST - Test Convert Generic RxCUI to Brand RxCUIs (1 to many).
|
||||
D CHKTF^XTMUNIT($$GEN2BR(310384)[205535,"$$GEN2BR failed")
|
||||
QUIT
|
||||
;
|
||||
; ---
|
||||
;
|
||||
RXN2BNS(RXN) ; $$ Public - Get all Brand Names associated with an RXN
|
||||
N BNS S BNS=""
|
||||
I $$ISBRAND(RXN) S RXN=$$BR2GEN(RXN)
|
||||
N ALLBN S ALLBN=$$GEN2BR(RXN)
|
||||
Q:ALLBN="" ""
|
||||
N BNNO F BNNO=1:1:$L(ALLBN,U) D
|
||||
. N EACHBN S EACHBN=$P(ALLBN,U,BNNO)
|
||||
. N BNRXCUI S BNRXCUI=$O(^C0CRXN(176.005,"B",EACHBN,"ingredient_of",""))
|
||||
. Q:BNRXCUI=""
|
||||
. N BNIEN S BNIEN=$O(^C0CRXN(176.001,"B",BNRXCUI,""))
|
||||
. S BNS=BNS_$P(^C0CRXN(176.001,BNIEN,0),U,15)_U
|
||||
QUIT $E(BNS,1,$L(BNS)-1)
|
||||
RXN2BNST ; @TEST - Test Get all Brand Names associated with an RXN
|
||||
D CHKTF^XTMUNIT($$RXN2BNS(205535)["Prozac","$$RXN2BNS failed")
|
||||
QUIT
|
||||
;
|
||||
; ---
|
||||
;
|
||||
RXN2NDC(RXN) ; Get NDC codes for RxNorm code
|
||||
N NDCS S NDCS=""
|
||||
N I F I=0:0 S I=$O(^C0CRXN(176.002,"ASAR","RXNORM","NDC",RXN,I)) Q:'I S NDCS=NDCS_^(I)_"^"
|
||||
S $E(NDCS,$L(NDCS))=""
|
||||
QUIT NDCS
|
||||
RXN2NDCT ; @TEST - Test Get NDC codes for RxNorm code
|
||||
D CHKTF^XTMUNIT($$RXN2NDC(197379)["^"_16714003309,"$$RXN2NDC failed")
|
||||
QUIT
|
||||
|
|
|
|||
Loading…
Reference in New Issue