240 lines
9.5 KiB
Mathematica
240 lines
9.5 KiB
Mathematica
C0CCCR ; CCDCCR/GPL - CCR MAIN PROCESSING; 6/6/08
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;;0.1;CCDCCR;nopatch;noreleasedate
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;Copyright 2008,2009 George Lilly, University of Minnesota.
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;Licensed under the terms of the GNU General Public License.
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;See attached copy of the License.
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;
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;This program is free software; you can redistribute it and/or modify
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;it under the terms of the GNU General Public License as published by
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;the Free Software Foundation; either version 2 of the License, or
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;(at your option) any later version.
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;
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;This program is distributed in the hope that it will be useful,
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;but WITHOUT ANY WARRANTY; without even the implied warranty of
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;MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
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;GNU General Public License for more details.
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;
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;You should have received a copy of the GNU General Public License along
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;with this program; if not, write to the Free Software Foundation, Inc.,
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;51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA.
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;
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; EXPORT A CCR
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;
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EXPORT ; EXPORT ENTRY POINT FOR CCR
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; Select a patient.
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S DIC=2,DIC(0)="AEMQ" D ^DIC
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I Y<1 Q ; EXIT
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S DFN=$P(Y,U,1) ; SET THE PATIENT
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D XPAT(DFN) ; EXPORT TO A FILE
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Q
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;
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XPAT(DFN,XPARMS,DIR,FN) ; EXPORT ONE PATIENT TO A FILE
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; DIR IS THE DIRECTORY, DEFAULTS IF NULL TO ^TMP("C0CCCR","ODIR")
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; FN IS FILE NAME, DEFAULTS IF NULL
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N CCRGLO,UDIR,UFN
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I '$D(DIR) S UDIR=""
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E S UDIR=DIR
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I '$D(FN) S UFN="" ; IF FILENAME IS NOT PASSED
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E S UFN=FN
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I '$D(XPARMS) S XPARMS=""
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D CCRRPC(.CCRGLO,DFN,XPARMS,"CCR")
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S OARY=$NA(^TMP("C0CCCR",$J,DFN,"CCR",1))
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S ONAM=UFN
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I UFN="" S ONAM="PAT_"_DFN_"_CCR_V1_0_20.xml"
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S ODIRGLB=$NA(^TMP("C0CCCR","ODIR"))
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I $D(^TMP("GPLCCR","ODIR")) S @ODIRGLB=^TMP("GPLCCR","ODIR")
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I '$D(@ODIRGLB) D ; IF NOT ODIR HAS BEEN SET
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. W "Warning.. please set ^TMP(""C0CCCR"",""ODIR"")=""output path""",! Q
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. ;S @ODIRGLB="/home/glilly/CCROUT"
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. ;S @ODIRGLB="/home/cedwards/"
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. S @ODIRGLB="/opt/wv/p/"
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S ODIR=UDIR
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I UDIR="" S ODIR=@ODIRGLB
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N ZY
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S ZY=$$OUTPUT^C0CXPATH(OARY,ONAM,ODIR)
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W !,$P(ZY,U,2),!
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Q
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;
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DCCR(DFN) ; DISPLAY A CCR THAT HAS JUST BEEN EXTRACTED
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;
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N G1
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S G1=$NA(^TMP("C0CCCR",$J,DFN,"CCR"))
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I $D(@G1@(0)) D ; CCR EXISTS
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. D PARY^C0CXPATH(G1)
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E W "CCR NOT CREATED, RUN D XPAT^C0CCCR(DFN,"""","""") FIRST",!
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Q
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;
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CCRRPC(CCRGRTN,DFN,CCRPARMS,CCRPART) ;RPC ENTRY POINT FOR CCR OUTPUT
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; CCRGRTN IS RETURN ARRAY PASSED BY NAME
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; DFN IS PATIENT IEN
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; CCRPART IS "CCR" FOR ENTIRE CCR, OR SECTION NAME FOR A PART
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; OF THE CCR BODY.. PARTS INCLUDE "PROBLEMS" "VITALS" ETC
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; CCRPARMS ARE PARAMETERS THAT AFFECT THE EXTRACTION
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; IN THE FORM "PARM1:VALUE1^PARM2:VALUE2"
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; EXAMPLE: "LABLIMIT:T-60" TO LIMIT LAB EXTRACTION TO THE LAST 60 DAYS
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; SEE C0CPARMS FOR A COMPLETE LIST OF SUPPORTED PARAMETERS
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I '$D(DEBUG) S DEBUG=0
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S CCD=0 ; NEED THIS FLAG TO DISTINGUISH FROM CCD
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D SET^C0CPARMS(CCRPARMS) ;SET PARAMETERS WITH CCRPARMS AS OVERRIDES
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I '$D(TESTLAB) S TESTLAB=0 ; FLAG FOR TESTING RESULTS SECTION
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I '$D(TESTALERT) S TESTALERT=1 ; FLAG FOR TESTING ALERTS SECTION
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I '$D(TESTMEDS) S TESTMEDS=0 ; FLAG FOR TESTING C0CMED SECTION
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S TGLOBAL=$NA(^TMP("C0CCCR",$J,"TEMPLATE")) ; GLOBAL FOR STORING TEMPLATE
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S CCRGLO=$NA(^TMP("C0CCCR",$J,DFN,"CCR")) ; GLOBAL FOR BUILDING THE CCR
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S ACTGLO=$NA(^TMP("C0CCCR",$J,DFN,"ACTORS")) ; GLOBAL FOR ALL ACTORS
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; TO GET PART OF THE CCR RETURNED, PASS CCRPART="PROBLEMS" ETC
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S CCRGRTN=$NA(^TMP("C0CCCR",$J,DFN,CCRPART)) ; RTN GLO NM OF PART OR ALL
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D LOAD^C0CCCR0(TGLOBAL) ; LOAD THE CCR TEMPLATE
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D CP^C0CXPATH(TGLOBAL,CCRGLO) ; COPY THE TEMPLATE TO CCR GLOBAL
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;
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; DELETE THE BODY, ACTORS AND SIGNATURES SECTIONS FROM GLOBAL
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; THESE WILL BE POPULATED AFTER CALLS TO THE XPATH ROUTINES
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D REPLACE^C0CXPATH(CCRGLO,"","//ContinuityOfCareRecord/Body")
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D REPLACE^C0CXPATH(CCRGLO,"","//ContinuityOfCareRecord/Actors")
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D REPLACE^C0CXPATH(CCRGLO,"","//ContinuityOfCareRecord/Signatures")
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I DEBUG F I=1:1:@CCRGLO@(0) W @CCRGLO@(I),!
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;
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D HDRMAP(CCRGLO,DFN) ; MAP HEADER VARIABLES
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;
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K ^TMP("C0CCCR",$J,"CCRSTEP") ; KILL GLOBAL PRIOR TO ADDING TO IT
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S CCRXTAB=$NA(^TMP("C0CCCR",$J,"CCRSTEP")) ; GLOBAL TO STORE CCR STEPS
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D INITSTPS(CCRXTAB) ; INITIALIZED CCR PROCESSING STEPS
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N PROCI,XI,TAG,RTN,CALL,XPATH,IXML,OXML,INXML,CCRBLD
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F PROCI=1:1:@CCRXTAB@(0) D ; PROCESS THE CCR BODY SECTIONS
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. S XI=@CCRXTAB@(PROCI) ; CALL COPONENTS TO PARSE
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. S RTN=$P(XI,";",2) ; NAME OF ROUTINE TO CALL
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. S TAG=$P(XI,";",1) ; LABEL INSIDE ROUTINE TO CALL
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. S XPATH=$P(XI,";",3) ; XPATH TO XML TO PASS TO ROUTINE
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. D QUERY^C0CXPATH(TGLOBAL,XPATH,"INXML") ; EXTRACT XML TO PASS
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. S IXML="INXML"
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. S OXML=$P(XI,";",4) ; ARRAY FOR SECTION VALUES
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. ; K @OXML ; KILL EXPECTED OUTPUT ARRAY
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. ; W OXML,!
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. S CALL="D "_TAG_"^"_RTN_"(IXML,DFN,OXML)" ; SETUP THE CALL
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. W "RUNNING ",CALL,!
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. X CALL
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. ; NOW INSERT THE RESULTS IN THE CCR BUFFER
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. I @OXML@(0)'=0 D ; THERE IS A RESULT
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. . D INSERT^C0CXPATH(CCRGLO,OXML,"//ContinuityOfCareRecord/Body")
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. . I DEBUG F C0CI=1:1:@OXML@(0) W @OXML@(C0CI),!
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N ACTT,ATMP,ACTT2,ATMP2 ; TEMPORARY ARRAY SYMBOLS FOR ACTOR PROCESSING
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D ACTLST^C0CCCR(CCRGLO,ACTGLO) ; GEN THE ACTOR LIST
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D QUERY^C0CXPATH(TGLOBAL,"//ContinuityOfCareRecord/Actors","ACTT")
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D EXTRACT^C0CACTOR("ACTT",ACTGLO,"ACTT2")
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D INSINNER^C0CXPATH(CCRGLO,"ACTT2","//ContinuityOfCareRecord/Actors")
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N TRIMI,J,DONE S DONE=0
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F TRIMI=0:0 D Q:DONE ; DELETE UNTIL ALL EMPTY ELEMENTS ARE GONE
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. S J=$$TRIM^C0CXPATH(CCRGLO) ; DELETE EMPTY ELEMENTS
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. I DEBUG W "TRIMMED",J,!
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. I J=0 S DONE=1 ; DONE WHEN TRIM RETURNS FALSE
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Q
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;
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INITSTPS(TAB) ; INITIALIZE CCR PROCESSING STEPS
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; TAB IS PASSED BY NAME
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I DEBUG W "TAB= ",TAB,!
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; ORDER FOR CCR IS PROBLEMS,FAMILYHISTORY,SOCIALHISTORY,MEDICATIONS,VITALSIGNS,RESULTS,HEALTHCAREPROVIDERS
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D PUSH^C0CXPATH(TAB,"EXTRACT;C0CPROBS;//ContinuityOfCareRecord/Body/Problems;^TMP(""C0CCCR"",$J,DFN,""PROBLEMS"")")
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D PUSH^C0CXPATH(TAB,"EXTRACT;C0CMED;//ContinuityOfCareRecord/Body/Medications;^TMP(""C0CCCR"",$J,DFN,""MEDICATIONS"")")
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D PUSH^C0CXPATH(TAB,"EXTRACT;C0CVITAL;//ContinuityOfCareRecord/Body/VitalSigns;^TMP(""C0CCCR"",$J,DFN,""VITALS"")")
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D PUSH^C0CXPATH(TAB,"MAP;C0CLABS;//ContinuityOfCareRecord/Body/Results;^TMP(""C0CCCR"",$J,DFN,""RESULTS"")")
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D PUSH^C0CXPATH(TAB,"MAP;C0CIMMU;//ContinuityOfCareRecord/Body/Immunizations;^TMP(""C0CCCR"",$J,DFN,""IMMUNE"")")
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I TESTALERT D PUSH^C0CXPATH(TAB,"EXTRACT;C0CALERT;//ContinuityOfCareRecord/Body/Alerts;^TMP(""C0CCCR"",$J,DFN,""ALERTS"")")
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Q
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;
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HDRMAP(CXML,DFN) ; MAP HEADER VARIABLES: FROM, TO ECT
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N VMAP S VMAP=$NA(^TMP("C0CCCR",$J,DFN,"HEADER"))
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; K @VMAP
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S @VMAP@("DATETIME")=$$FMDTOUTC^C0CUTIL($$NOW^XLFDT,"DT")
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; I IHDR="" D ; HEADER ARRAY IS NOT PROVIDED, USE DEFAULTS
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D ; ALWAYS MAP THESE VARIABLES
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. S @VMAP@("ACTORPATIENT")="ACTORPATIENT_"_DFN
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. S @VMAP@("ACTORFROM")="ACTORORGANIZATION_"_DUZ ; FROM DUZ - ???
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. S @VMAP@("ACTORFROM2")="ACTORSYSTEM_1" ; SECOND FROM IS THE SYSTEM
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. S @VMAP@("ACTORTO")="ACTORPATIENT_"_DFN ; FOR TEST PURPOSES
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. S @VMAP@("PURPOSEDESCRIPTION")="CEND PHR" ; FOR TEST PURPOSES
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. S @VMAP@("ACTORTOTEXT")="Patient" ; FOR TEST PURPOSES
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. ; THIS IS THE USE CASE FOR THE PHR WHERE "TO" IS THE PATIENT
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;I IHDR'="" D ; HEADER VALUES ARE PROVIDED
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;. D CP^C0CXPATH(IHDR,VMAP) ; COPY HEADER VARIABLES TO MAP ARRAY
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N CTMP
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D MAP^C0CXPATH(CXML,VMAP,"CTMP")
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D CP^C0CXPATH("CTMP",CXML)
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N HRIMVARS ;
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S HRIMVARS=$NA(^TMP("C0CRIM","VARS",DFN,"HEADER")) ; TO PERSIST VARS
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M @HRIMVARS@(1)=@VMAP ; PERSIST THE HEADER VARIABLES IN RIM TABLE
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S @HRIMVARS@(0)=1 ; ONLY ONE SET OF HEADERS PER PATIENT
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Q
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;
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ACTLST(AXML,ACTRTN) ; RETURN THE ACTOR LIST FOR THE XML IN AXML
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; AXML AND ACTRTN ARE PASSED BY NAME
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; EACH ACTOR RECORD HAS 3 PARTS - IE IF OBJECTID=ACTORPATIENT_2
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; P1= OBJECTID - ACTORPATIENT_2
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; P2= OBJECT TYPE - PATIENT OR PROVIDER OR SOFTWARE
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;OR INSTITUTION
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; OR PERSON(IN PATIENT FILE IE NOK)
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; P3= IEN RECORD NUMBER FOR ACTOR - 2
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N I,J,K,L
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K @ACTRTN ; CLEAR RETURN ARRAY
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F I=1:1:@AXML@(0) D ; SCAN ALL LINES
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. I @AXML@(I)?.E1"<ActorID>".E D ; THERE IS AN ACTOR THIS LINE
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. . S J=$P($P(@AXML@(I),"<ActorID>",2),"</ActorID>",1)
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. . I DEBUG W "<ActorID>=>",J,!
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. . I J'="" S K(J)="" ; HASHING ACTOR
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. . ; TO GET RID OF DUPLICATES
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S I="" ; GOING TO $O THROUGH THE HASH
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F J=0:0 D Q:$O(K(I))=""
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. S I=$O(K(I)) ; WALK THROUGH THE HASH OF ACTORS
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. S $P(L,U,1)=I ; FIRST PIECE IS THE OBJECT ID
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. S $P(L,U,2)=$P($P(I,"ACTOR",2),"_",1) ; ACTOR TYPE
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. S $P(L,U,3)=$P(I,"_",2) ; IEN RECORD NUMBER FOR ACTOR
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. D PUSH^C0CXPATH(ACTRTN,L) ; ADD THE ACTOR TO THE RETURN ARRAY
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Q
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;
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TEST ; RUN ALL THE TEST CASES
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D TESTALL^C0CUNIT("C0CCCR")
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Q
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;
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ZTEST(WHICH) ; RUN ONE SET OF TESTS
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N ZTMP
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D ZLOAD^C0CUNIT("ZTMP","C0CCCR")
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D ZTEST^C0CUNIT(.ZTMP,WHICH)
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Q
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;
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TLIST ; LIST THE TESTS
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N ZTMP
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D ZLOAD^C0CUNIT("ZTMP","C0CCCR")
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D TLIST^C0CUNIT(.ZTMP)
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Q
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;
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;;><TEST>
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;;><PROBLEMS>
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;;>>>K C0C S C0C=""
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;;>>>D CCRRPC^C0CCCR(.C0C,"2","PROBLEMS","")
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;;>>?@C0C@(@C0C@(0))["</Problems>"
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;;><VITALS>
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;;>>>K C0C S C0C=""
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;;>>>D CCRRPC^C0CCCR(.C0C,"2","VITALS","")
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;;>>?@C0C@(@C0C@(0))["</VitalSigns>"
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;;><CCR>
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;;>>>K C0C S C0C=""
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;;>>>D CCRRPC^C0CCCR(.C0C,"2","CCR","")
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;;>>?@C0C@(@C0C@(0))["</ContinuityOfCareRecord>"
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;;><ACTLST>
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;;>>>K C0C S C0C=""
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;;>>>D CCRRPC^C0CCCR(.C0C,"2","CCR","")
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;;>>>D ACTLST^C0CCCR(C0C,"ACTTEST")
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;;><ACTORS>
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;;>>>D ZTEST^C0CCCR("ACTLST")
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;;>>>D QUERY^C0CXPATH(TGLOBAL,"//ContinuityOfCareRecord/Actors","G2")
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;;>>>D EXTRACT^C0CACTOR("G2","ACTTEST","G3")
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;;>>?G3(G3(0))["</Actors>"
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;;><TRIM>
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;;>>>D ZTEST^C0CCCR("CCR")
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;;>>>W $$TRIM^C0CXPATH(CCRGLO)
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;;><ALERTS>
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;;>>>S TESTALERT=1
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;;>>>K C0C S C0C=""
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;;>>>D CCRRPC^C0CCCR(.C0C,"2","ALERTS","")
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;;>>?@C0C@(@C0C@(0))["</Alerts>"
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