VistA-ccr/p/C0CCCD.m

273 lines
12 KiB
Mathematica

C0CCCD ; CCDCCR/GPL - CCD MAIN PROCESSING; 6/6/08
;;0.1;CCDCCR;nopatch;noreleasedate
;Copyright 2008,2009 George Lilly, University of Minnesota.
;Licensed under the terms of the GNU General Public License.
;See attached copy of the License.
;
;This program is free software; you can redistribute it and/or modify
;it under the terms of the GNU General Public License as published by
;the Free Software Foundation; either version 2 of the License, or
;(at your option) any later version.
;
;This program is distributed in the hope that it will be useful,
;but WITHOUT ANY WARRANTY; without even the implied warranty of
;MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
;GNU General Public License for more details.
;
;You should have received a copy of the GNU General Public License along
;with this program; if not, write to the Free Software Foundation, Inc.,
;51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA.
;
; EXPORT A CCR
;
EXPORT ; EXPORT ENTRY POINT FOR CCR
; Select a patient.
S DIC=2,DIC(0)="AEMQ" D ^DIC
I Y<1 Q ; EXIT
S DFN=$P(Y,U,1) ; SET THE PATIENT
D XPAT(DFN,"","") ; EXPORT TO A FILE
Q
;
XPAT(DFN,DIR,FN) ; EXPORT ONE PATIENT TO A FILE
; DIR IS THE DIRECTORY, DEFAULTS IF NULL TO ^TMP("C0CCCR","ODIR")
; FN IS FILE NAME, DEFAULTS IF NULL
; N CCDGLO
D CCDRPC(.CCDGLO,DFN,"CCD","","","")
S OARY=$NA(^TMP("C0CCCR",$J,DFN,"CCD",1))
S ONAM=FN
I FN="" S ONAM="PAT_"_DFN_"_CCD_V1.xml"
S ODIRGLB=$NA(^TMP("C0CCCR","ODIR"))
I '$D(@ODIRGLB) D ; IF NOT ODIR HAS BEEN SET
. S @ODIRGLB="/home/glilly/CCROUT"
. ;S @ODIRGLB="/home/cedwards/"
. ;S @ODIRGLB="/opt/wv/p/"
S ODIR=DIR
I DIR="" S ODIR=@ODIRGLB
N ZY
S ZY=$$OUTPUT^C0CXPATH(OARY,ONAM,ODIR)
W $P(ZY,U,2)
Q
;
CCDRPC(CCRGRTN,DFN,CCRPART,TIME1,TIME2,HDRARY) ;RPC ENTRY POINT FOR CCR OUTPUT
; CCRGRTN IS RETURN ARRAY PASSED BY NAME
; DFN IS PATIENT IEN
; CCRPART IS "CCR" FOR ENTIRE CCR, OR SECTION NAME FOR A PART
; OF THE CCR BODY.. PARTS INCLUDE "PROBLEMS" "VITALS" ETC
; TIME1 IS STARTING TIME TO INCLUDE - NULL MEANS ALL
; TIME2 IS ENDING TIME TO INCLUDE TIME IS FILEMAN TIME
; - NULL MEANS NOW
; HDRARY IS THE HEADER ARRAY DEFINING THE "FROM" AND
; "TO" VARIABLES
; IF NULL WILL DEFAULT TO "FROM" ORGANIZATION AND "TO" DFN
I '$D(DEBUG) S DEBUG=0
N CCD S CCD=0 ; FLAG FOR PROCESSING A CCD
I CCRPART="CCD" S CCD=1 ; WE ARE PROCESSING A CCD
S TGLOBAL=$NA(^TMP("C0CCCR",$J,"TEMPLATE")) ; GLOBAL FOR STORING TEMPLATE
I CCD S CCDGLO=$NA(^TMP("C0CCCR",$J,DFN,"CCD")) ; GLOBAL FOR THE CCD
E S CCDGLO=$NA(^TMP("C0CCCR",$J,DFN,"CCR")) ; GLOBAL FOR BUILDING THE CCR
S ACTGLO=$NA(^TMP("C0CCCR",$J,DFN,"ACTORS")) ; GLOBAL FOR ALL ACTORS
; TO GET PART OF THE CCR RETURNED, PASS CCRPART="PROBLEMS" ETC
S CCRGRTN=$NA(^TMP("C0CCCR",$J,DFN,CCRPART)) ; RTN GLO NM OF PART OR ALL
I CCD D LOAD^C0CCCD1(TGLOBAL) ; LOAD THE CCR TEMPLATE
E D LOAD^C0CCCR0(TGLOBAL) ; LOAD THE CCR TEMPLATE
D CP^C0CXPATH(TGLOBAL,CCDGLO) ; COPY THE TEMPLATE TO CCR GLOBAL
N CAPSAVE,CAPSAVE2 ; FOR HOLDING THE CCD ROOT LINES
S CAPSAVE=@TGLOBAL@(3) ; SAVE THE CCD ROOT
S CAPSAVE2=@TGLOBAL@(@TGLOBAL@(0)) ; SAVE LAST LINE OF CCD
S @CCDGLO@(3)="<ContinuityOfCareRecord>" ; CAP WITH CCR ROOT
S @TGLOBAL@(3)=@CCDGLO@(3) ; CAP THE TEMPLATE TOO
S @CCDGLO@(@CCDGLO@(0))="</ContinuityOfCareRecord>" ; FINISH CAP
S @TGLOBAL@(@TGLOBAL@(0))="</ContinuityOfCareRecord>" ; FINISH CAP TEMP
;
; DELETE THE BODY, ACTORS AND SIGNATURES SECTIONS FROM GLOBAL
; THESE WILL BE POPULATED AFTER CALLS TO THE XPATH ROUTINES
D REPLACE^C0CXPATH(CCDGLO,"","//ContinuityOfCareRecord/Body")
D REPLACE^C0CXPATH(CCDGLO,"","//ContinuityOfCareRecord/Actors")
I 'CCD D REPLACE^C0CXPATH(CCDGLO,"","//ContinuityOfCareRecord/Signatures")
I DEBUG F I=1:1:@CCDGLO@(0) W @CCDGLO@(I),!
;
I 'CCD D HDRMAP(CCDGLO,DFN,HDRARY) ; MAP HEADER VARIABLES
; MAPPING THE PATIENT PORTION OF THE CDA HEADER
S ZZX="//ContinuityOfCareRecord/recordTarget/patientRole/patient"
D QUERY^C0CXPATH(CCDGLO,ZZX,"ACTT1")
D PATIENT^C0CACTOR("ACTT1",DFN,"ACTORPATIENT_"_DFN,"ACTT2") ; MAP PATIENT
I DEBUG D PARY^C0CXPATH("ACTT2")
D REPLACE^C0CXPATH(CCDGLO,"ACTT2",ZZX)
I DEBUG D PARY^C0CXPATH(CCDGLO)
K ACTT1 K ACCT2
; MAPPING THE PROVIDER ORGANIZATION,AUTHOR,INFORMANT,CUSTODIAN CDA HEADER
; FOR NOW, THEY ARE ALL THE SAME AND RESOLVE TO ORGANIZATION
D ORG^C0CACTOR(CCDGLO,DFN,"ACTORPATIENTORGANIZATION","ACTT2") ; MAP ORG
D CP^C0CXPATH("ACTT2",CCDGLO)
;
K ^TMP("C0CCCR",$J,"CCRSTEP") ; KILL GLOBAL PRIOR TO ADDING TO IT
S CCRXTAB=$NA(^TMP("C0CCCR",$J,"CCRSTEP")) ; GLOBAL TO STORE CCR STEPS
D INITSTPS(CCRXTAB) ; INITIALIZED CCR PROCESSING STEPS
N I,XI,TAG,RTN,CALL,XPATH,IXML,OXML,INXML,CCRBLD
F I=1:1:@CCRXTAB@(0) D ; PROCESS THE CCR BODY SECTIONS
. S XI=@CCRXTAB@(I) ; CALL COPONENTS TO PARSE
. S RTN=$P(XI,";",2) ; NAME OF ROUTINE TO CALL
. S TAG=$P(XI,";",1) ; LABEL INSIDE ROUTINE TO CALL
. S XPATH=$P(XI,";",3) ; XPATH TO XML TO PASS TO ROUTINE
. D QUERY^C0CXPATH(TGLOBAL,XPATH,"INXML") ; EXTRACT XML TO PASS
. S IXML="INXML"
. I CCD D SHAVE(IXML) ; REMOVE ALL BUT REPEATING PARTS OF TEMPLATE SECTION
. S OXML=$P(XI,";",4) ; ARRAY FOR SECTION VALUES
. ; W OXML,!
. S CALL="D "_TAG_"^"_RTN_"(IXML,DFN,OXML)" ; SETUP THE CALL
. W "RUNNING ",CALL,!
. X CALL
. I @OXML@(0)'=0 D ; THERE IS A RESULT
. . I CCD D QUERY^C0CXPATH(TGLOBAL,XPATH,"ITMP") ; XML TO UNSHAVE WITH
. . I CCD D UNSHAVE("ITMP",OXML)
. . I CCD D UNMARK^C0CXPATH(OXML) ; REMOVE THE CCR MARKUP FROM SECTION
. ; NOW INSERT THE RESULTS IN THE CCR BUFFER
. D INSERT^C0CXPATH(CCDGLO,OXML,"//ContinuityOfCareRecord/Body")
. I DEBUG F C0CI=1:1:@OXML@(0) W @OXML@(C0CI),!
; NEED TO ADD BACK IN ACTOR PROCESSING AFTER WE FIGURE OUT LINKAGE
; D ACTLST^C0CCCR(CCDGLO,ACTGLO) ; GEN THE ACTOR LIST
; D QUERY^C0CXPATH(TGLOBAL,"//ContinuityOfCareRecord/Actors","ACTT")
; D EXTRACT^C0CACTOR("ACTT",ACTGLO,"ACTT2")
; D INSINNER^C0CXPATH(CCDGLO,"ACTT2","//ContinuityOfCareRecord/Actors")
N I,J,DONE S DONE=0
F I=0:0 D Q:DONE ; DELETE UNTIL ALL EMPTY ELEMENTS ARE GONE
. S J=$$TRIM^C0CXPATH(CCDGLO) ; DELETE EMPTY ELEMENTS
. W "TRIMMED",J,!
. I J=0 S DONE=1 ; DONE WHEN TRIM RETURNS FALSE
I CCD D ; TURN THE BODY INTO A CCD COMPONENT
. N I
. F I=1:1:@CCDGLO@(0) D ; SEARCH THROUGH THE ENTIRE ARRAY
. . I @CCDGLO@(I)["<Body>" D ; REPLACE BODY MARKUP
. . . S @CCDGLO@(I)="<component><structuredBody>" ; WITH CCD EQ
. . I @CCDGLO@(I)["</Body>" D ; REPLACE BODY MARKUP
. . . S @CCDGLO@(I)="</structuredBody></component>"
S @CCDGLO@(3)=CAPSAVE ; UNCAP - TURN IT BACK INTO A CCD
S @CCDGLO@(@CCDGLO@(0))=CAPSAVE2 ; UNCAP LAST LINE
Q
;
INITSTPS(TAB) ; INITIALIZE CCR PROCESSING STEPS
; TAB IS PASSED BY NAME
W "TAB= ",TAB,!
; ORDER FOR CCR IS PROBLEMS,FAMILYHISTORY,SOCIALHISTORY,MEDICATIONS,VITALSIGNS,RESULTS,HEALTHCAREPROVIDERS
D PUSH^C0CXPATH(TAB,"EXTRACT;C0CPROBS;//ContinuityOfCareRecord/Body/Problems;^TMP(""C0CCCR"",$J,DFN,""PROBLEMS"")")
;D PUSH^C0CXPATH(TAB,"EXTRACT;C0CMEDS;//ContinuityOfCareRecord/Body/Medications;^TMP(""C0CCCR"",$J,DFN,""MEDICATIONS"")")
I 'CCD D PUSH^C0CXPATH(TAB,"EXTRACT;C0CVITAL;//ContinuityOfCareRecord/Body/VitalSigns;^TMP(""C0CCCR"",$J,DFN,""VITALS"")")
Q
;
SHAVE(SHXML) ; REMOVES THE 2-6 AND N-1 AND N-2 LINES FROM A COMPONENT
; NEEDED TO EXPOSE THE REPEATING PARTS FOR GENERATION
N SHTMP,SHBLD ; TEMP ARRAY AND BUILD LIST
W SHXML,!
W @SHXML@(1),!
D QUEUE^C0CXPATH("SHBLD",SHXML,1,1) ; THE FIRST LINE IS NEEDED
D QUEUE^C0CXPATH("SHBLD",SHXML,7,@SHXML@(0)-3) ; REPEATING PART
D QUEUE^C0CXPATH("SHBLD",SHXML,@SHXML@(0),@SHXML@(0)) ; LAST LINE
D PARY^C0CXPATH("SHBLD") ; PRINT BUILD LIST
D BUILD^C0CXPATH("SHBLD","SHTMP") ; BUILD EDITED SECTION
D CP^C0CXPATH("SHTMP",SHXML) ; COPY RESULT TO PASSED ARRAY
Q
;
UNSHAVE(ORIGXML,SHXML) ; REPLACES THE 2-6 AND N-1 AND N-2 LINES FROM TEMPLATE
; NEEDED TO RESTORM FIXED TOP AND BOTTOM OF THE COMPONENT XML
N SHTMP,SHBLD ; TEMP ARRAY AND BUILD LIST
W SHXML,!
W @SHXML@(1),!
D QUEUE^C0CXPATH("SHBLD",ORIGXML,1,6) ; FIRST 6 LINES OF TEMPLATE
D QUEUE^C0CXPATH("SHBLD",SHXML,2,@SHXML@(0)-1) ; INS ALL BUT FIRST/LAST
D QUEUE^C0CXPATH("SHBLD",ORIGXML,@ORIGXML@(0)-2,@ORIGXML@(0)) ; FROM TEMP
D PARY^C0CXPATH("SHBLD") ; PRINT BUILD LIST
D BUILD^C0CXPATH("SHBLD","SHTMP") ; BUILD EDITED SECTION
D CP^C0CXPATH("SHTMP",SHXML) ; COPY RESULT TO PASSED ARRAY
Q
;
HDRMAP(CXML,DFN,IHDR) ; MAP HEADER VARIABLES: FROM, TO ECT
N VMAP S VMAP=$NA(^TMP("C0CCCR",$J,DFN,"HEADER"))
; K @VMAP
S @VMAP@("DATETIME")=$$FMDTOUTC^C0CUTIL($$NOW^XLFDT,"DT")
I IHDR="" D ; HEADER ARRAY IS NOT PROVIDED, USE DEFAULTS
. S @VMAP@("ACTORPATIENT")="ACTORPATIENT_"_DFN
. S @VMAP@("ACTORFROM")="ACTORORGANIZATION_"_DUZ ; FROM DUZ - ???
. S @VMAP@("ACTORFROM2")="ACTORSYSTEM_1" ; SECOND FROM IS THE SYSTEM
. S @VMAP@("ACTORTO")="ACTORPATIENT_"_DFN ; FOR TEST PURPOSES
. S @VMAP@("PURPOSEDESCRIPTION")="CEND PHR" ; FOR TEST PURPOSES
. S @VMAP@("ACTORTOTEXT")="Patient" ; FOR TEST PURPOSES
. ; THIS IS THE USE CASE FOR THE PHR WHERE "TO" IS THE PATIENT
I IHDR'="" D ; HEADER VALUES ARE PROVIDED
. D CP^C0CXPATH(IHDR,VMAP) ; COPY HEADER VARIABLES TO MAP ARRAY
N CTMP
D MAP^C0CXPATH(CXML,VMAP,"CTMP")
D CP^C0CXPATH("CTMP",CXML)
Q
;
ACTLST(AXML,ACTRTN) ; RETURN THE ACTOR LIST FOR THE XML IN AXML
; AXML AND ACTRTN ARE PASSED BY NAME
; EACH ACTOR RECORD HAS 3 PARTS - IE IF OBJECTID=ACTORPATIENT_2
; P1= OBJECTID - ACTORPATIENT_2
; P2= OBJECT TYPE - PATIENT OR PROVIDER OR SOFTWARE
;OR INSTITUTION
; OR PERSON(IN PATIENT FILE IE NOK)
; P3= IEN RECORD NUMBER FOR ACTOR - 2
N I,J,K,L
K @ACTRTN ; CLEAR RETURN ARRAY
F I=1:1:@AXML@(0) D ; SCAN ALL LINES
. I @AXML@(I)?.E1"<ActorID>".E D ; THERE IS AN ACTOR THIS LINE
. . S J=$P($P(@AXML@(I),"<ActorID>",2),"</ActorID>",1)
. . W "<ActorID>=>",J,!
. . I J'="" S K(J)="" ; HASHING ACTOR
. . ; TO GET RID OF DUPLICATES
S I="" ; GOING TO $O THROUGH THE HASH
F J=0:0 D Q:$O(K(I))="" ;
. S I=$O(K(I)) ; WALK THROUGH THE HASH OF ACTORS
. S $P(L,U,1)=I ; FIRST PIECE IS THE OBJECT ID
. S $P(L,U,2)=$P($P(I,"ACTOR",2),"_",1) ; ACTOR TYPE
. S $P(L,U,3)=$P(I,"_",2) ; IEN RECORD NUMBER FOR ACTOR
. D PUSH^C0CXPATH(ACTRTN,L) ; ADD THE ACTOR TO THE RETURN ARRAY
Q
;
TEST ; RUN ALL THE TEST CASES
D TESTALL^C0CUNIT("C0CCCR")
Q
;
ZTEST(WHICH) ; RUN ONE SET OF TESTS
N ZTMP
D ZLOAD^C0CUNIT("ZTMP","C0CCCR")
D ZTEST^C0CUNIT(.ZTMP,WHICH)
Q
;
TLIST ; LIST THE TESTS
N ZTMP
D ZLOAD^C0CUNIT("ZTMP","C0CCCR")
D TLIST^C0CUNIT(.ZTMP)
Q
;
;;><TEST>
;;><PROBLEMS>
;;>>>K C0C S C0C=""
;;>>>D CCRRPC^C0CCCR(.C0C,"2","PROBLEMS","","","")
;;>>?@C0C@(@C0C@(0))["</Problems>"
;;><VITALS>
;;>>>K C0C S C0C=""
;;>>>D CCRRPC^C0CCCR(.C0C,"2","VITALS","","","")
;;>>?@C0C@(@C0C@(0))["</VitalSigns>"
;;><CCR>
;;>>>K C0C S C0C=""
;;>>>D CCRRPC^C0CCCR(.C0C,"2","CCR","","","")
;;>>?@C0C@(@C0C@(0))["</ContinuityOfCareRecord>"
;;><ACTLST>
;;>>>K C0C S C0C=""
;;>>>D CCRRPC^C0CCCR(.C0C,"2","CCR","","","")
;;>>>D ACTLST^C0CCCR(C0C,"ACTTEST")
;;><ACTORS>
;;>>>D ZTEST^C0CCCR("ACTLST")
;;>>>D QUERY^C0CXPATH(TGLOBAL,"//ContinuityOfCareRecord/Actors","G2")
;;>>>D EXTRACT^C0CACTOR("G2","ACTTEST","G3")
;;>>?G3(G3(0))["</Actors>"
;;><TRIM>
;;>>>D ZTEST^C0CCCR("CCR")
;;>>>W $$TRIM^C0CXPATH(CCDGLO)
;;><CCD>
;;>>>K C0C S C0C=""
;;>>>D CCRRPC^C0CCCR(.C0C,"2","CCD","","","")
;;>>?@C0C@(@C0C@(0))["</ContinuityOfCareRecord>"
;;></TEST>