192 lines
7.5 KiB
Mathematica
192 lines
7.5 KiB
Mathematica
C0PLKUP ; VEN/SMH - Extrinsics to map med numbers ; 5/8/12 4:09pm
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;;1.0;C0P;;Apr 25, 2012;Build 103
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;Copyright 2009 Sam Habiel. Licensed under the terms of the GNU
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;General Public License See attached copy of the License.
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;
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;This program is free software; you can redistribute it and/or modify
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;it under the terms of the GNU General Public License as published by
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;the Free Software Foundation; either version 2 of the License, or
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;(at your option) any later version.
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;
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;This program is distributed in the hope that it will be useful,
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;but WITHOUT ANY WARRANTY; without even the implied warranty of
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;MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
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;GNU General Public License for more details.
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;
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;You should have received a copy of the GNU General Public License along
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;with this program; if not, write to the Free Software Foundation, Inc.,
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;51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA.
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Q
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FDBFN() Q 1130590010 ; First Databank Drugs file number
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RXNFN() Q 1130590011.001 ; RxNorm Concepts file number
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FULLNAME(MEDID) ; $$ Public - Get FDB full name for the drug
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; Used in Bulletin
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; Input: MEDID By Value
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; Output: Extrinsic
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N C0PIEN S C0PIEN=$$FIND1^DIC($$FDBFN,"","QX",MEDID,"B")
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Q $$GET1^DIQ($$FDBFN,C0PIEN,"MED MEDID DESC")
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GCN(MEDID) ; $$ Public - Get GCN given MEDID
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; Input: MEDID by Value
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; Output: Extrinsic
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; MEDID is the .01 field in the First Databank Drug file
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; GCN is the 1 field = Generic Code Number
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; WS supplies MEDID in return. Need Generic Code Number to map to RxNorm.
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N X,Y,DTOUT,DUOUT,DLAYGO,DIC
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S DIC=$$FDBFN
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S X=MEDID
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S DIC(0)="OXZ" ; One entry only, Exact match, return zero node
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D ^DIC
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I Y<0 Q "" ; Failed match
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Q $P(Y(0),U,2) ; GCN is 2nd piece of zero node
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;
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RXNCUI(GCN) ; $$ Public - Get RxNorm CUI using GCN
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; Input: GCN by Value
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; Output: Extrinsic
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; Seach GCN index for an exact match
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; One match, quick lookup, Exact matching
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N C0PIEN S C0PIEN=$$FIND1^DIC($$RXNFN,"","QX",GCN,"GCN")
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Q $$GET1^DIQ($$RXNFN,C0PIEN,.01)
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;
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VUID(RXNCUI) ; $$ Public - Get VUID(s) for given RXNCUI for Clinical Drug
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; Input: RXNCUI by Value
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; Output: Caret delimited extrinsic. Should not be more than 2 entries.
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; @;4 means return IEN and VUID.
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N C0POUT,C0PVUID
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I '$D(^DIC($$RXNFN,0,"GL")) Q "" ; RXNORM UMLS NOT INSTALLED
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D FIND^DIC($$RXNFN,"","@;4","PXQ",RXNCUI,"","VUIDCD","","","C0POUT")
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; Example output:
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; SAM("DILIST",0)="2^*^0^"
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; SAM("DILIST",0,"MAP")="IEN^4"
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; SAM("DILIST",1,0)="112482^4010153"
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; SAM("DILIST",2,0)="112484^4016607"
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I +$G(C0POUT("DILIST",0))=0 Q "" ; no matches
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N I S I=0
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F S I=$O(C0POUT("DILIST",I)) Q:I="" S C0PVUID=$G(C0PVUID)_$P(C0POUT("DILIST",I,0),U,2)_"^"
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S C0PVUID=$E(C0PVUID,1,$L(C0PVUID)-1) ; remove trailing ^
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Q C0PVUID
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VUID2(MEDID) ; $$ Public - Get VUID(s) for given MEDID
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Q $$VUID($$RXNCUI($$GCN(MEDID)))
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VAPROD(VUID) ; $$ Public - Get VA Product IEN from VUID
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; Input VUID by Value
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; Output: Extrinsic
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Q $$FIND1^DIC(50.68,"","QX",VUID,"AVUID")
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DRUG(VAPROD) ; $$ Public - Get Drug(s) using VA Product IEN
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; Input: VA Product IEN By Value
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; OUtput: Caret delimited extrinsic
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N C0POUT,C0PDRUG
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;D FIND^DIC(50,"","@;4","PXQ",VAPROD,"","C0PVAPROD","","","C0POUT")
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;D FIND^DIC(50,"","@;4","PXQ",VAPROD,"","AC0P","","","C0POUT") ;GPL 7/10
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I +VAPROD=0 Q 0 ;
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I '$D(^PSDRUG("AC0P",VAPROD)) Q 0 ;W "AC0P cross reference error" Q 0 ;
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;S C0PDRUG=$O(^PSDRUG("AC0P",VAPROD,"")) ;GPL ABOVE FIND DOESN'T WORK
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N I S I=""
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S C0PDRUG=""
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F S I=$O(^PSDRUG("AC0P",VAPROD,I)) Q:I="" D ;
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. S C0PDRUG=C0PDRUG_I_"^"
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S C0PDRUG=$E(C0PDRUG,1,$L(C0PDRUG)-1) ; remove trailing ^
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Q C0PDRUG
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; Example output:
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; C0POUT("DILIST",0)="2^*^0^"
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; C0POUT("DILIST",0,"MAP")="IEN^4"
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; C0POUT("DILIST",1,0)="1512^"
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; C0POUT("DILIST",2,0)="21632^"
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; or
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; C0POUT("DILIST",0)="0^*^0^"
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; C0POUT("DILIST",0,"MAP")="IEN^4"
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I +$G(C0POUT("DILIST",0))=0 Q "" ; no matches
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N I S I=0
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F S I=$O(C0POUT("DILIST",I)) Q:I="" S C0PDRUG=$G(C0PDRUG)_$P(C0POUT("DILIST",I,0),U)_"^"
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S C0PDRUG=$E(C0PDRUG,1,$L(C0PDRUG)-1) ; remove trailing ^
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Q C0PDRUG
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DRUG2(MEDID) ; $$ Public - Get Drugs for a FDB MEDID
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; Input: MEDID by Value
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; Output: Caret delimited extrinsic
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N OUT S OUT=""
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N C0PDRUGS ; tmp holding space for drugs
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N C0PVUIDS S C0PVUIDS=$$VUID2(MEDID)
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N C0PI
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F C0PI=1:1:$L(C0PVUIDS,U) D ; for each VUID
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. N C0PVUID S C0PVUID=$P(C0PVUIDS,U,C0PI)
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. N C0PVAPROD S C0PVAPROD=$$VAPROD(C0PVUID) ; get VA Product
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. S C0PDRUGS=$$DRUG(C0PVAPROD)
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. S:$L(C0PDRUGS) OUT=OUT_C0PDRUGS_"^"
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S OUT=$E(OUT,1,$L(OUT)-1) ; rm trailing ^
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Q OUT
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RXNCUI2(BASE) ; $$ Public - Get RxNorm CUI for FDB Ingredient/Base
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; Input: BASE By Value
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; Output: RxNorm CUI
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N C0PIEN S C0PIEN=$$FIND1^DIC($$RXNFN,"","QX",BASE,"NDDFBASE")
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Q $$GET1^DIQ($$RXNFN,C0PIEN,.01)
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VUIDIN(RXNCUI) ; $$ Public - Get VUID Ingredient for RxNorm CUI
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; Input: RXNCUI By Value
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; Output: VUID
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N C0PIEN S C0PIEN=$$FIND1^DIC($$RXNFN,"","QX",RXNCUI,"VUIDIN")
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Q $$GET1^DIQ($$RXNFN,C0PIEN,"CODE")
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VAGEN(VUID) ; $$ Public - Get VA Generic for VUID Ingredient
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; Input: VUID By Value
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; Output: IEN^VA Generic Name (i.e. .01 field value)
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N C0PIEN S C0PIEN=$$FIND1^DIC(50.6,"","QX",VUID,"AVUID")
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N C0P01 S C0P01=$$GET1^DIQ(50.6,C0PIEN,.01)
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Q C0PIEN_"^"_C0P01
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VAGEN2(BASE) ; $$ Public - Get VA Generic for FDB Ingredient/Base
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; Input: BASE By Value
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; Output: IEN^VA Generic Name (i.e. .01 field value)
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Q $$VAGEN($$VUIDIN($$RXNCUI2(BASE)))
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DRUGING(VUID) ; $$ Public - Get Drug Ingredient for VUID Ingredient
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; Input: VUID By Value
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; Output: IEN^Drug Ingredient Name (i.e. .01 field value)
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N C0PIEN S C0PIEN=$$FIND1^DIC(50.416,"","QX",VUID,"AVUID")
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N C0P01 S C0P01=$$GET1^DIQ(50.416,C0PIEN,.01)
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Q C0PIEN_"^"_C0P01
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DRUGING2(BASE) ; $$ Public - Get Drug Ingredient for FDB Ingredient/Base
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; Input: BASE By Value
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; Output: IEN^Drug Ingredient Name (i.e. .01 field value)
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Q $$DRUGING($$VUIDIN($$RXNCUI2(BASE)))
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RXNCUI3(VUID) ; $$ Public - Get RXNCUI for VUID (any VUID)
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; Input: VUID By Value
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; Output: RXNCUI
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I $G(VUID)="" Q ""
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N C0PIEN ; S C0PIEN=$$FIND1^DIC($$RXNFN,"","QX",VUID,"VUID")
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S C0PIEN=$O(^C0P("RXN","VUID",VUID,"")) ;GPL FIX FOR MULTIPLES
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Q $$GET1^DIQ($$RXNFN,C0PIEN,.01)
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NDDFBASE(RXNCUI) ; $$ Public - Get NDDF Ingredient for RXNCUI
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; Input: RXNCUI By Value
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; Output: NDDF Base code
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N C0PIEN S C0PIEN=$$FIND1^DIC($$RXNFN,"","QX",RXNCUI,"RNDDFBASE")
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Q +$$GET1^DIQ($$RXNFN,C0PIEN,"CODE") ; strip leading zeros
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NDDFBAS2(VUID) ; $$ Public - Get NDDF Ingredient for VUID
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; NB: WILL ONLY WORK IF VUID IS AN INGREDIENT VUID, NOT A CLINICAL DRUG
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; Input: VUID By Value
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; Output: NDDF Base code
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Q $$NDDFBASE($$RXNCUI3(VUID))
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;
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DRUGNAM(CURRENTMEDS,ZMED) ; EXTRINSIC WHICH RETURNS THE FULL NAME
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; OF THE DRUG FROM CURRENTMEDS, PASSED BY REFERENCE
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; ZMED IS THE NUMBER OF THE MED IN THE ARRAY
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; IF THERE IS A DRUGID, IT IS USED TO LOOKUP THE NAME
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; IF THERE IS NO DRUGID, IT IS A FREETEXT MED AND THE NAME IS
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; PULLED FROM THE SIG, WHERE IS IT STORED WITH A "|" DELIMITER
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N ZD
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I $D(CURRENTMEDS(ZMED,"DRUG")) S ZD=$$FULLNAME(CURRENTMEDS(ZMED,"DRUG"))
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E D ; pull the name from the first piece of the sig
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. N ZDSIG
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. S ZDSIG=$G(CURRENTMEDS(ZMED,"SIG",1,0))
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. S ZD=$P(ZDSIG,"|",1)
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Q ZD
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;
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CODES(MEDID) ; EXTRINSIC WHICH RETURNS A LINE OF CODES FOR THE MED
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; FORMAT IS MEDID:XXX GCN:XXX RXNORM:XXX VUID:XXX DRUG:XXX
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N ZL
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S ZL="MEDID:"_MEDID_" "
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N ZG S ZG=$$GCN(MEDID) ; GCN (GENERIC CONCEPT NUMBER)
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S ZL=ZL_"GCN:"_ZG_" "
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N ZR S ZR=$$RXNCUI(ZG) ; RXNORM CONCEPT ID
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S ZL=ZL_"RXNORM:"_ZR_" "
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N ZV S ZV=$$VUID(ZR) ; VUID (VA UNIVERSAL ID)
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S ZL=ZL_"VUID:"_ZV_" "
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N ZD S ZD=$$DRUG2(MEDID) ; VISTA DRUG FILE IEN
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I ZD=0 S ZD=""
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S ZL=ZL_"DRUG:"_ZD_" "
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Q ZL
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;
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