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Updated license for routines

This commit is contained in:
sam 2012-10-30 17:53:46 +00:00
parent 5d53c9b73a
commit 59866e33d9
13 changed files with 258 additions and 280 deletions
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28
p/C0SDEM.m
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@ -1,21 +1,19 @@
C0SDEM ; GPL - Smart Demographics Processing ;2/22/12 17:05
;;1.0;VISTA SMART CONTAINER;;Sep 26, 2012;Build 4
;Copyright 2012 George Lilly. Licensed under the terms of the GNU
;General Public License See attached copy of the License.
C0SDEM ; GPL - Smart Demographics Processing ; 10/30/12 10:59am
;;1.0;VISTA SMART CONTAINER;;Sep 26, 2012;Build 5
;Copyright 2012 George Lilly.
;
;This program is free software; you can redistribute it and/or modify
;it under the terms of the GNU General Public License as published by
;the Free Software Foundation; either version 2 of the License, or
;(at your option) any later version.
; This program is free software: you can redistribute it and/or modify
; it under the terms of the GNU Affero General Public License as
; published by the Free Software Foundation, either version 3 of the
; License, or (at your option) any later version.
;
;This program is distributed in the hope that it will be useful,
;but WITHOUT ANY WARRANTY; without even the implied warranty of
;MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
;GNU General Public License for more details.
; This program is distributed in the hope that it will be useful,
; but WITHOUT ANY WARRANTY; without even the implied warranty of
; MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
; GNU Affero General Public License for more details.
;
;You should have received a copy of the GNU General Public License along
;with this program; if not, write to the Free Software Foundation, Inc.,
;51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA.
; You should have received a copy of the GNU Affero General Public License
; along with this program. If not, see <http://www.gnu.org/licenses/>.
;
Q
;

27
p/C0SDOM.m
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@ -1,22 +1,19 @@
C0SDOM ; GPL - Smart Container - DOM PROCESSING ROUTINES ;6/6/11 17:05
;;1.0;VISTA SMART CONTAINER;;Sep 26, 2012;Build 4
;Copyright 2011,2012 George Lilly. Licensed under the terms of the GNU
;General Public License See attached copy of the License.
;;1.0;VISTA SMART CONTAINER;;Sep 26, 2012;Build 5
;Copyright 2011,2012 George Lilly.
;
;This program is free software; you can redistribute it and/or modify
;it under the terms of the GNU General Public License as published by
;the Free Software Foundation; either version 2 of the License, or
;(at your option) any later version.
; This program is free software: you can redistribute it and/or modify
; it under the terms of the GNU Affero General Public License as
; published by the Free Software Foundation, either version 3 of the
; License, or (at your option) any later version.
;
;This program is distributed in the hope that it will be useful,
;but WITHOUT ANY WARRANTY; without even the implied warranty of
;MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
;GNU General Public License for more details.
; This program is distributed in the hope that it will be useful,
; but WITHOUT ANY WARRANTY; without even the implied warranty of
; MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
; GNU Affero General Public License for more details.
;
;You should have received a copy of the GNU General Public License along
;with this program; if not, write to the Free Software Foundation, Inc.,
;51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA.
; You should have received a copy of the GNU Affero General Public License
; along with this program. If not, see <http://www.gnu.org/licenses/>.
;
Q
;

26
p/C0SLAB.m
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@ -1,21 +1,19 @@
C0SLAB ; GPL - Smart Lab Processing ;4/15/12 17:05
;;1.0;VISTA SMART CONTAINER;;Sep 26, 2012;Build 4
;Copyright 2012 George Lilly. Licensed under the terms of the GNU
;General Public License See attached copy of the License.
;;1.0;VISTA SMART CONTAINER;;Sep 26, 2012;Build 5
;Copyright 2012 George Lilly.
;
;This program is free software; you can redistribute it and/or modify
;it under the terms of the GNU General Public License as published by
;the Free Software Foundation; either version 2 of the License, or
;(at your option) any later version.
; This program is free software: you can redistribute it and/or modify
; it under the terms of the GNU Affero General Public License as
; published by the Free Software Foundation, either version 3 of the
; License, or (at your option) any later version.
;
;This program is distributed in the hope that it will be useful,
;but WITHOUT ANY WARRANTY; without even the implied warranty of
;MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
;GNU General Public License for more details.
; This program is distributed in the hope that it will be useful,
; but WITHOUT ANY WARRANTY; without even the implied warranty of
; MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
; GNU Affero General Public License for more details.
;
;You should have received a copy of the GNU General Public License along
;with this program; if not, write to the Free Software Foundation, Inc.,
;51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA.
; You should have received a copy of the GNU Affero General Public License
; along with this program. If not, see <http://www.gnu.org/licenses/>.
;
Q
;

26
p/C0SMART.m
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@ -1,21 +1,19 @@
C0SMART ; GPL - Smart Container Entry Points;2/22/12 17:05
;;1.0;VISTA SMART CONTAINER;;Sep 26, 2012;Build 4
;Copyright 2012 George Lilly. Licensed under the terms of the GNU
;General Public License See attached copy of the License.
;;1.0;VISTA SMART CONTAINER;;Sep 26, 2012;Build 5
;Copyright 2012 George Lilly.
;
;This program is free software; you can redistribute it and/or modify
;it under the terms of the GNU General Public License as published by
;the Free Software Foundation; either version 2 of the License, or
;(at your option) any later version.
; This program is free software: you can redistribute it and/or modify
; it under the terms of the GNU Affero General Public License as
; published by the Free Software Foundation, either version 3 of the
; License, or (at your option) any later version.
;
;This program is distributed in the hope that it will be useful,
;but WITHOUT ANY WARRANTY; without even the implied warranty of
;MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
;GNU General Public License for more details.
; This program is distributed in the hope that it will be useful,
; but WITHOUT ANY WARRANTY; without even the implied warranty of
; MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
; GNU Affero General Public License for more details.
;
;You should have received a copy of the GNU General Public License along
;with this program; if not, write to the Free Software Foundation, Inc.,
;51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA.
; You should have received a copy of the GNU Affero General Public License
; along with this program. If not, see <http://www.gnu.org/licenses/>.
;
Q
EN(ZRTN,ZPATID,ZTYP,ZFORM,DEBUG) ; return a Smart RDF file section ZTYP

26
p/C0SMED.m
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@ -1,21 +1,19 @@
C0SMED ; GPL - Smart Meds Processing ;2/22/12 17:05
;;1.0;VISTA SMART CONTAINER;;Sep 26, 2012;Build 4
;Copyright 2012 George Lilly. Licensed under the terms of the GNU
;General Public License See attached copy of the License.
;;1.0;VISTA SMART CONTAINER;;Sep 26, 2012;Build 5
;Copyright 2012 George Lilly.
;
;This program is free software; you can redistribute it and/or modify
;it under the terms of the GNU General Public License as published by
;the Free Software Foundation; either version 2 of the License, or
;(at your option) any later version.
; This program is free software: you can redistribute it and/or modify
; it under the terms of the GNU Affero General Public License as
; published by the Free Software Foundation, either version 3 of the
; License, or (at your option) any later version.
;
;This program is distributed in the hope that it will be useful,
;but WITHOUT ANY WARRANTY; without even the implied warranty of
;MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
;GNU General Public License for more details.
; This program is distributed in the hope that it will be useful,
; but WITHOUT ANY WARRANTY; without even the implied warranty of
; MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
; GNU Affero General Public License for more details.
;
;You should have received a copy of the GNU General Public License along
;with this program; if not, write to the Free Software Foundation, Inc.,
;51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA.
; You should have received a copy of the GNU Affero General Public License
; along with this program. If not, see <http://www.gnu.org/licenses/>.
;
Q
;

3
p/C0SMXMLB.m
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@ -1,5 +1,6 @@
MXMLBLD ;;ISF/RWF - Tool to build XML ;07/09/09 16:55 - Smart Container Ver.
;;1.0;VISTA SMART CONTAINER;;Sep 26, 2012;Build 4
;;1.0;VISTA SMART CONTAINER;;Sep 26, 2012;Build 5
; Public Domain
QUIT
;
;DOC - The top level tag

26
p/C0SNHIN.m
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@ -1,21 +1,19 @@
C0SNHIN ; GPL - Smart Container - OUTPUT OF NHINV ROUTINES;6/3/11 17:05
;;1.0;VISTA SMART CONTAINER;;Sep 26, 2012;Build 4
;Copyright 2011-2012 George Lilly. Licensed under the terms of the GNU
;General Public License See attached copy of the License.
;;1.0;VISTA SMART CONTAINER;;Sep 26, 2012;Build 5
;Copyright 2011-2012 George Lilly.
;
;This program is free software; you can redistribute it and/or modify
;it under the terms of the GNU General Public License as published by
;the Free Software Foundation; either version 2 of the License, or
;(at your option) any later version.
; This program is free software: you can redistribute it and/or modify
; it under the terms of the GNU Affero General Public License as
; published by the Free Software Foundation, either version 3 of the
; License, or (at your option) any later version.
;
;This program is distributed in the hope that it will be useful,
;but WITHOUT ANY WARRANTY; without even the implied warranty of
;MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
;GNU General Public License for more details.
; This program is distributed in the hope that it will be useful,
; but WITHOUT ANY WARRANTY; without even the implied warranty of
; MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
; GNU Affero General Public License for more details.
;
;You should have received a copy of the GNU General Public License along
;with this program; if not, write to the Free Software Foundation, Inc.,
;51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA.
; You should have received a copy of the GNU Affero General Public License
; along with this program. If not, see <http://www.gnu.org/licenses/>.
;
Q
EN(ZRTN,ZDFN,ZPART,KEEP) ; GENERATE AN NHIN ARRAY FOR A PATIENT

2
p/C0SNHINV.m
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@ -1,5 +1,5 @@
C0SNHINV ;SLC/MKB - Serve VistA data as XML via RPC - Smart Container Version
;;1.0;VISTA SMART CONTAINER;;Sep 26, 2012;Build 4
;;1.0;VISTA SMART CONTAINER;;Sep 26, 2012;Build 5
;
; External References DBIA#
; ------------------- -----

26
p/C0SPROB.m
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@ -1,21 +1,19 @@
C0SPROB ; GPL - Smart Problem Processing ;5/01/12 17:05
;;1.0;VISTA SMART CONTAINER;;Sep 26, 2012;Build 4
;Copyright 2012 George Lilly. Licensed under the terms of the GNU
;General Public License See attached copy of the License.
;;1.0;VISTA SMART CONTAINER;;Sep 26, 2012;Build 5
;Copyright 2012 George Lilly.
;
;This program is free software; you can redistribute it and/or modify
;it under the terms of the GNU General Public License as published by
;the Free Software Foundation; either version 2 of the License, or
;(at your option) any later version.
; This program is free software: you can redistribute it and/or modify
; it under the terms of the GNU Affero General Public License as
; published by the Free Software Foundation, either version 3 of the
; License, or (at your option) any later version.
;
;This program is distributed in the hope that it will be useful,
;but WITHOUT ANY WARRANTY; without even the implied warranty of
;MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
;GNU General Public License for more details.
; This program is distributed in the hope that it will be useful,
; but WITHOUT ANY WARRANTY; without even the implied warranty of
; MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
; GNU Affero General Public License for more details.
;
;You should have received a copy of the GNU General Public License along
;with this program; if not, write to the Free Software Foundation, Inc.,
;51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA.
; You should have received a copy of the GNU Affero General Public License
; along with this program. If not, see <http://www.gnu.org/licenses/>.
;
Q
;

26
p/C0SPROB2.m
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@ -1,21 +1,19 @@
C0SPROB ; GPL - Smart Problem Processing ;5/01/12 17:05
;;1.0;VISTA SMART CONTAINER;;Sep 26, 2012;Build 4
;Copyright 2012 George Lilly. Licensed under the terms of the GNU
;General Public License See attached copy of the License.
;;1.0;VISTA SMART CONTAINER;;Sep 26, 2012;Build 5
;Copyright 2012 George Lilly.
;
;This program is free software; you can redistribute it and/or modify
;it under the terms of the GNU General Public License as published by
;the Free Software Foundation; either version 2 of the License, or
;(at your option) any later version.
; This program is free software: you can redistribute it and/or modify
; it under the terms of the GNU Affero General Public License as
; published by the Free Software Foundation, either version 3 of the
; License, or (at your option) any later version.
;
;This program is distributed in the hope that it will be useful,
;but WITHOUT ANY WARRANTY; without even the implied warranty of
;MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
;GNU General Public License for more details.
; This program is distributed in the hope that it will be useful,
; but WITHOUT ANY WARRANTY; without even the implied warranty of
; MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
; GNU Affero General Public License for more details.
;
;You should have received a copy of the GNU General Public License along
;with this program; if not, write to the Free Software Foundation, Inc.,
;51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA.
; You should have received a copy of the GNU Affero General Public License
; along with this program. If not, see <http://www.gnu.org/licenses/>.
;
Q
;

270
p/C0STBL.m
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@ -1,137 +1,135 @@
C0STBL ; GPL - Smart Container CREATE A TABLE OF NHINV VALUES;2/22/12 17:05
;;1.0;VISTA SMART CONTAINER;;Sep 26, 2012;Build 4
;Copyright 2012 George Lilly. Licensed under the terms of the GNU
;General Public License See attached copy of the License.
;
;This program is free software; you can redistribute it and/or modify
;it under the terms of the GNU General Public License as published by
;the Free Software Foundation; either version 2 of the License, or
;(at your option) any later version.
;
;This program is distributed in the hope that it will be useful,
;but WITHOUT ANY WARRANTY; without even the implied warranty of
;MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
;GNU General Public License for more details.
;
;You should have received a copy of the GNU General Public License along
;with this program; if not, write to the Free Software Foundation, Inc.,
;51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA.
;
Q
EN(BEGDFN,DFNCNT,ZPART) ; START IS A DFN
I '$D(BEGDFN) S BDGDFN=""
I '$D(DFNCNT) S DFNCNT=150
I '$D(ZPART) S ZPART=""
N ZTBL S ZTBL=$NA(^TMP("C0STBL"))
N ZI,ZCNT,ZG
S ZI=$O(^DPT(BEGDFN),-1)
S ZCNT=1
F S ZI=$O(^DPT(ZI)) Q:((+ZI=0)!(ZCNT>DFNCNT)) D ;
. S ZCNT=ZCNT+1
. W ZI," "
. K ZG
. D EN^C0SNHIN(.ZG,ZI,ZPART)
. M @ZTBL@(ZI)=ZG
. K G
. N GDIR S GDIR="/home/vista/p/"
. D EN^C0SMART(.G,ZI,"med")
. I $D(G) W !,$$output^C0XGET1("G",ZI_"-med.rdf",GDIR)
. k G
. D EN^C0SMART(.G,ZI,"patient")
. I $D(G) W !,$$output^C0XGET1("G",ZI_"-patient.rdf",GDIR)
. K G
. D EN^C0SMART(.G,ZI,"lab")
. I $D(G) W !,$$output^C0XGET1("G",ZI_"-lab.rdf",GDIR)
. K G
. D EN^C0SMART(.G,ZI,"problem")
. I $D(G) W !,$$output^C0XGET1("G",ZI_"-problem.rdf",GDIR)
Q
;
LOADHACK ;
N ZI
F ZI=2:1:374 D ;
. D IMPORT^C0XF2N("hack"_ZI_".xml","/home/vista/hack/")
Q
;
LABCNT ; COUNT LAB TESTS AND LOINC CODES
K LABCNT,GLOINC,PATCNT
S (LABCNT,GLOINC,PATCNT)=0
N ZI S ZI=""
N GN S GN=$NA(^TMP("C0STBL"))
F S ZI=$O(@GN@(ZI)) Q:ZI="" D ;
. S PATCNT=PATCNT+1
. I '$D(@GN@(ZI,"lab")) Q ;
. N ZJ S ZJ=""
. F S ZJ=$O(@GN@(ZI,"lab",ZJ)) Q:ZJ="" D ;
. . S LABCNT=LABCNT+1
. . S X=$G(@GN@(ZI,"lab",ZJ,"loinc@value"))
. . I X'="" S GLOINC=GLOINC+1
W !,"Total number of patients: ",PATCNT
W !,"Total number of lab results: ",LABCNT
W !,"Total number of lab results with loinc codes: ",GLOINC
W !,"Percentage of lab tests with loinc codes: ",$P((GLOINC/LABCNT)*100,".")_"%"
Q
;
PROBCNT ; COUNT PROBLEMS AND SNOMED CODES
K PROBCNT,GSNO,PATCNT
S (PROBCNT,GSNO,PATCNT)=0
N ZI S ZI=""
N GN S GN=$NA(^TMP("C0STBL"))
F S ZI=$O(@GN@(ZI)) Q:ZI="" D ;
. S PATCNT=PATCNT+1
. I '$D(@GN@(ZI,"problem")) Q ;
. N ZJ S ZJ=""
. F S ZJ=$O(@GN@(ZI,"problem",ZJ)) Q:ZJ="" D ;
. . S PROBCNT=PROBCNT+1
. . S X=$G(@GN@(ZI,"problem",ZJ,"icd@value"))
. . S Y=$$SNOMED^C0SPROB2(X)
. . I Y'="" S GSNO=GSNO+1
W !,"Total number of patients: ",PATCNT
W !,"Total number of problems: ",PROBCNT
W !,"Total number of problems with snomed codes: ",GSNO
W !,"Percentage of problems with SNOMED codes: ",$P((GSNO/PROBCNT)*100,".")_"%"
Q
;
MEDCNT ; COUNT INPATIENT VS OUTPATIENT MEDICATIONS
K MEDCNT,OMED,PATCNT,DOSE,UNITS,FORM,SCHED,ROUTE
S (MEDCNT,OMED,GSNO,PATCNT)=0
N ZI S ZI=""
N GN S GN=$NA(^TMP("C0STBL"))
F S ZI=$O(@GN@(ZI)) Q:ZI="" D ;
. S PATCNT=PATCNT+1
. I '$D(@GN@(ZI,"med")) Q ;
. N ZJ S ZJ=""
. F S ZJ=$O(@GN@(ZI,"med",ZJ)) Q:ZJ="" D ;
. . S MEDCNT=MEDCNT+1
. . I $G(@GN@(ZI,"med",ZJ,"vaStatus@value"))="EXPIRED" D Q ;
. . . I $D(DEBUG) W !,"Expired Mediation, Skipping"
. . I $G(@GN@(ZI,"med",ZJ,"vaType@value"))="I" D Q ;
. . . I $D(DEBUG) W !,"Inpatient Med, skipping"
. . I $G(@GN@(ZI,"med",ZI,"vaType@value"))="V" D Q ;
. . . I $D(DEBUG) W !,"IV Inpatient Med, skipping"
. . S OMED=OMED+1
. . S X=$G(@GN@(ZI,"med",ZJ,"form@value"))
. . S FORM(X)=$G(FORM(X))+1
. . S X=$G(@GN@(ZI,"med",ZJ,"doses.dose@dose"))
. . I X="" S X="UNKNOWN"
. . S DOSE(X)=$G(DOSE(X))+1
. . S X=$G(@GN@(ZI,"med",ZJ,"doses.dose@units"))
. . I X="" S X="UNKNOWN"
. . S UNITS(X)=$G(UNITS(X))+1
. . S X=$G(@GN@(ZI,"med",ZJ,"doses.dose@schedule"))
. . I X="" S X="UNKNOWN"
. . S SCHED(X)=$G(SCHED(X))+1
. . S X=$G(@GN@(ZI,"med",ZJ,"doses.dosc@route"))
. . I X="" S X="UNKNOWN"
. . S ROUTE(X)=$G(ROUTE(X))+1
W !,"Total number of patients: ",PATCNT
W !,"Total number of medications: ",MEDCNT
W !,"Total number of outpatient medications: ",OMED
W !,"Percentage of outpatient medications: ",$P((OMED/MEDCNT)*100,".")_"%",!
ZWR FORM
ZWR DOSE
ZWR UNITS
ZWR SCHED
ZWR ROUTE
Q
;
;;1.0;VISTA SMART CONTAINER;;Sep 26, 2012;Build 5
;Copyright 2012 George Lilly.
;
; This program is free software: you can redistribute it and/or modify
; it under the terms of the GNU Affero General Public License as
; published by the Free Software Foundation, either version 3 of the
; License, or (at your option) any later version.
;
; This program is distributed in the hope that it will be useful,
; but WITHOUT ANY WARRANTY; without even the implied warranty of
; MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
; GNU Affero General Public License for more details.
;
; You should have received a copy of the GNU Affero General Public License
; along with this program. If not, see <http://www.gnu.org/licenses/>.
;
Q
EN(BEGDFN,DFNCNT,ZPART) ; START IS A DFN
I '$D(BEGDFN) S BDGDFN=""
I '$D(DFNCNT) S DFNCNT=150
I '$D(ZPART) S ZPART=""
N ZTBL S ZTBL=$NA(^TMP("C0STBL"))
N ZI,ZCNT,ZG
S ZI=$O(^DPT(BEGDFN),-1)
S ZCNT=1
F S ZI=$O(^DPT(ZI)) Q:((+ZI=0)!(ZCNT>DFNCNT)) D ;
. S ZCNT=ZCNT+1
. W ZI," "
. K ZG
. D EN^C0SNHIN(.ZG,ZI,ZPART)
. M @ZTBL@(ZI)=ZG
. K G
. N GDIR S GDIR="/home/vista/p/"
. D EN^C0SMART(.G,ZI,"med")
. I $D(G) W !,$$output^C0XGET1("G",ZI_"-med.rdf",GDIR)
. k G
. D EN^C0SMART(.G,ZI,"patient")
. I $D(G) W !,$$output^C0XGET1("G",ZI_"-patient.rdf",GDIR)
. K G
. D EN^C0SMART(.G,ZI,"lab")
. I $D(G) W !,$$output^C0XGET1("G",ZI_"-lab.rdf",GDIR)
. K G
. D EN^C0SMART(.G,ZI,"problem")
. I $D(G) W !,$$output^C0XGET1("G",ZI_"-problem.rdf",GDIR)
Q
;
LOADHACK ;
N ZI
F ZI=2:1:374 D ;
. D IMPORT^C0XF2N("hack"_ZI_".xml","/home/vista/hack/")
Q
;
LABCNT ; COUNT LAB TESTS AND LOINC CODES
K LABCNT,GLOINC,PATCNT
S (LABCNT,GLOINC,PATCNT)=0
N ZI S ZI=""
N GN S GN=$NA(^TMP("C0STBL"))
F S ZI=$O(@GN@(ZI)) Q:ZI="" D ;
. S PATCNT=PATCNT+1
. I '$D(@GN@(ZI,"lab")) Q ;
. N ZJ S ZJ=""
. F S ZJ=$O(@GN@(ZI,"lab",ZJ)) Q:ZJ="" D ;
. . S LABCNT=LABCNT+1
. . S X=$G(@GN@(ZI,"lab",ZJ,"loinc@value"))
. . I X'="" S GLOINC=GLOINC+1
W !,"Total number of patients: ",PATCNT
W !,"Total number of lab results: ",LABCNT
W !,"Total number of lab results with loinc codes: ",GLOINC
W !,"Percentage of lab tests with loinc codes: ",$P((GLOINC/LABCNT)*100,".")_"%"
Q
;
PROBCNT ; COUNT PROBLEMS AND SNOMED CODES
K PROBCNT,GSNO,PATCNT
S (PROBCNT,GSNO,PATCNT)=0
N ZI S ZI=""
N GN S GN=$NA(^TMP("C0STBL"))
F S ZI=$O(@GN@(ZI)) Q:ZI="" D ;
. S PATCNT=PATCNT+1
. I '$D(@GN@(ZI,"problem")) Q ;
. N ZJ S ZJ=""
. F S ZJ=$O(@GN@(ZI,"problem",ZJ)) Q:ZJ="" D ;
. . S PROBCNT=PROBCNT+1
. . S X=$G(@GN@(ZI,"problem",ZJ,"icd@value"))
. . S Y=$$SNOMED^C0SPROB2(X)
. . I Y'="" S GSNO=GSNO+1
W !,"Total number of patients: ",PATCNT
W !,"Total number of problems: ",PROBCNT
W !,"Total number of problems with snomed codes: ",GSNO
W !,"Percentage of problems with SNOMED codes: ",$P((GSNO/PROBCNT)*100,".")_"%"
Q
;
MEDCNT ; COUNT INPATIENT VS OUTPATIENT MEDICATIONS
K MEDCNT,OMED,PATCNT,DOSE,UNITS,FORM,SCHED,ROUTE
S (MEDCNT,OMED,GSNO,PATCNT)=0
N ZI S ZI=""
N GN S GN=$NA(^TMP("C0STBL"))
F S ZI=$O(@GN@(ZI)) Q:ZI="" D ;
. S PATCNT=PATCNT+1
. I '$D(@GN@(ZI,"med")) Q ;
. N ZJ S ZJ=""
. F S ZJ=$O(@GN@(ZI,"med",ZJ)) Q:ZJ="" D ;
. . S MEDCNT=MEDCNT+1
. . I $G(@GN@(ZI,"med",ZJ,"vaStatus@value"))="EXPIRED" D Q ;
. . . I $D(DEBUG) W !,"Expired Mediation, Skipping"
. . I $G(@GN@(ZI,"med",ZJ,"vaType@value"))="I" D Q ;
. . . I $D(DEBUG) W !,"Inpatient Med, skipping"
. . I $G(@GN@(ZI,"med",ZI,"vaType@value"))="V" D Q ;
. . . I $D(DEBUG) W !,"IV Inpatient Med, skipping"
. . S OMED=OMED+1
. . S X=$G(@GN@(ZI,"med",ZJ,"form@value"))
. . S FORM(X)=$G(FORM(X))+1
. . S X=$G(@GN@(ZI,"med",ZJ,"doses.dose@dose"))
. . I X="" S X="UNKNOWN"
. . S DOSE(X)=$G(DOSE(X))+1
. . S X=$G(@GN@(ZI,"med",ZJ,"doses.dose@units"))
. . I X="" S X="UNKNOWN"
. . S UNITS(X)=$G(UNITS(X))+1
. . S X=$G(@GN@(ZI,"med",ZJ,"doses.dose@schedule"))
. . I X="" S X="UNKNOWN"
. . S SCHED(X)=$G(SCHED(X))+1
. . S X=$G(@GN@(ZI,"med",ZJ,"doses.dosc@route"))
. . I X="" S X="UNKNOWN"
. . S ROUTE(X)=$G(ROUTE(X))+1
W !,"Total number of patients: ",PATCNT
W !,"Total number of medications: ",MEDCNT
W !,"Total number of outpatient medications: ",OMED
W !,"Percentage of outpatient medications: ",$P((OMED/MEDCNT)*100,".")_"%",!
ZWR FORM
ZWR DOSE
ZWR UNITS
ZWR SCHED
ZWR ROUTE
Q
;

26
p/C0SUTIL.m
View File

@ -1,21 +1,19 @@
C0SUTIL ; GPL - Smart Processing Utilities ;2/22/12 17:05
;;1.0;VISTA SMART CONTAINER;;Sep 26, 2012;Build 4
;Copyright 2012 George Lilly. Licensed under the terms of the GNU
;General Public License See attached copy of the License.
;;1.0;VISTA SMART CONTAINER;;Sep 26, 2012;Build 5
;Copyright 2012 George Lilly.
;
;This program is free software; you can redistribute it and/or modify
;it under the terms of the GNU General Public License as published by
;the Free Software Foundation; either version 2 of the License, or
;(at your option) any later version.
; This program is free software: you can redistribute it and/or modify
; it under the terms of the GNU Affero General Public License as
; published by the Free Software Foundation, either version 3 of the
; License, or (at your option) any later version.
;
;This program is distributed in the hope that it will be useful,
;but WITHOUT ANY WARRANTY; without even the implied warranty of
;MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
;GNU General Public License for more details.
; This program is distributed in the hope that it will be useful,
; but WITHOUT ANY WARRANTY; without even the implied warranty of
; MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
; GNU Affero General Public License for more details.
;
;You should have received a copy of the GNU General Public License along
;with this program; if not, write to the Free Software Foundation, Inc.,
;51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA.
; You should have received a copy of the GNU Affero General Public License
; along with this program. If not, see <http://www.gnu.org/licenses/>.
;
Q
;

26
p/C0SXPATH.m
View File

@ -1,21 +1,19 @@
C0SXPATH ; CCDCCR/GPL - XPATH XML manipulation utilities; 6/1/08 ; 9/26/12 10:45am
;;1.0;VISTA SMART CONTAINER;;Sep 26, 2012;Build 4
;Copyright 2008-2012 George Lilly. Licensed under the terms of the GNU
;General Public License See attached copy of the License.
;;1.0;VISTA SMART CONTAINER;;Sep 26, 2012;Build 5
;Copyright 2008-2012 George Lilly.
;
;This program is free software; you can redistribute it and/or modify
;it under the terms of the GNU General Public License as published by
;the Free Software Foundation; either version 2 of the License, or
;(at your option) any later version.
; This program is free software: you can redistribute it and/or modify
; it under the terms of the GNU Affero General Public License as
; published by the Free Software Foundation, either version 3 of the
; License, or (at your option) any later version.
;
;This program is distributed in the hope that it will be useful,
;but WITHOUT ANY WARRANTY; without even the implied warranty of
;MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
;GNU General Public License for more details.
; This program is distributed in the hope that it will be useful,
; but WITHOUT ANY WARRANTY; without even the implied warranty of
; MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
; GNU Affero General Public License for more details.
;
;You should have received a copy of the GNU General Public License along
;with this program; if not, write to the Free Software Foundation, Inc.,
;51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA.
; You should have received a copy of the GNU Affero General Public License
; along with this program. If not, see <http://www.gnu.org/licenses/>.
;
W "This is an XML XPATH utility library",!
W !