VistA-smart/p/C0SMED.m

156 lines
6.2 KiB
Mathematica

C0SMED ; GPL - Smart Meds Processing ;2/22/12 17:05
;;1.0;VISTA SMART CONTAINER;;Sep 26, 2012;Build 5
;Copyright 2012 George Lilly.
;
; This program is free software: you can redistribute it and/or modify
; it under the terms of the GNU Affero General Public License as
; published by the Free Software Foundation, either version 3 of the
; License, or (at your option) any later version.
;
; This program is distributed in the hope that it will be useful,
; but WITHOUT ANY WARRANTY; without even the implied warranty of
; MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
; GNU Affero General Public License for more details.
;
; You should have received a copy of the GNU Affero General Public License
; along with this program. If not, see <http://www.gnu.org/licenses/>.
;
Q
;
MED(GRTN,C0SARY) ; GRTN, passed by reference,
; is the return name of the graph created. "" if none
; C0SARY is passed in by reference and is the NHIN array of meds
;
I $O(C0SARY("med",""))="" D Q ;
. I $D(DEBUG) W !,"No Meds"
S GRTN="" ; default to no meds
N C0SGRF
S C0SGRF="vistaSmart:"_ZPATID_"/"_ZTYP
I $D(DEBUG) W !,"Processing ",C0SGRF
D DELGRAPH^C0XF2N(C0SGRF) ; delete the old graph
N MEDTRP ; MEDS TRIPLES
D INITFARY^C0XF2N("C0XFARY") ; which triple store to use
N FARY S FARY="C0XFARY"
D USEFARY^C0XF2N(FARY)
D VOCINIT^C0XUTIL
;
N DUPCHK S DUPCHK="" ; check for no duplicates
N ZI S ZI=""
F S ZI=$O(C0SARY("med",ZI)) Q:ZI="" D ;
. N SDATE,SDTMP
. I $G(C0SARY("med",ZI,"vaStatus@value"))="EXPIRED" D Q ;
. . I $D(DEBUG) W !,"Expired Mediation, Skipping"
. I $G(COSARY("med",ZI,"vaType@value"))="I" D Q ;
. . I $D(DEBUG) W !,"Inpatient Med, skipping"
. I $G(COSARY("med",ZI,"vaType@value"))="V" D Q ;
. . I $D(DEBUG) W !,"IV Inpatient Med, skipping"
. ;
. S SDTMP=$G(C0SARY("med",ZI,"ordered@value"))
. I SDTMP="" D ;
. . S SDTMP=$G(C0SARY("med",ZI,"start@value"))
. S SDATE=$$FMTE^XLFDT(SDTMP,"7D") ; ordered date
. S SDATE=$TR(SDATE,"/","-") ; change slashes to hyphens
. I SDATE="" S SDATE="UNKNOWN"
. N DNAME,VUID,DCODE,RXNORM,SIG
. S DNAME=$G(C0SARY("med",ZI,"name@value"))
. I DNAME="" D ;
. . S DNAME=$G(C0SARY("med",ZI,"products.product@name"))
. S VUID=$G(C0SARY("med",ZI,"products.product.vaProduct@vuid"))
. S DCODE=$G(C0SARY("med",ZI,"products.product.vaProduct@code"))
. I DCODE="" S DCODE=$G(C0SARY("med",ZI,"id@value"))
. S RXNORM=$$RXCUI(VUID) ; look up RxNorm code
. I $P(RXNORM,"^",2)="RXNORM" D ;
. . S RXVER=$P(RXNORM,"^",3)
. . S RXNORM=$P(RXNORM,"^",1)
. E D Q ;
. . I $D(DEBUG) W !,"NO RXNORM NUMBER AVAILABLE"
. . I $D(DEBUG) W !,RXNORM
. I DNAME="" D Q ;
. . I $D(DEBUG) W !,"Error No Drug Name"
. S MEDGRF=C0SGRF_"/"_DCODE_"-"_$G(SDTMP)
. I +$D(DUPCHK(MEDGRF)) D Q ; NO DUPS ALLOWED
. . I $D(DEBUG) W !,"Found Duplicate Medication ",MEDGRF
. S DUPCHK(MEDGRF)=""
. I $D(DEBUG) D ;
. . W !,"Processing Medication ",MEDGRF
. . W !,DNAME
. . W !,RXNORM
. S SIG=$G(C0SARY("med",ZI,"sig"))
. I SIG["|" D ;
. . N SIGTMP
. . S SIGTMP=SIG
. . S SIG=$P(SIGTMP,"|",2) ; remove the drug name from the sig
. . I DNAME["FREE TXT" D ; eRx free text drug, get drug name from sig
. . . S DNAME=$P(SIGTMP,"|",1) ; eRx Drug name is stored as the first piece of the sig
. K C0XFARY
. D ADD^C0XF2N(C0SGRF,MEDGRF,"rdf:type","sp:Medication",FARY)
. D ADD^C0XF2N(C0SGRF,MEDGRF,"sp:belongsTo",C0SGRF,FARY)
. N DSUBJ S DSUBJ=$$ANONS^C0XF2N ; anonomous subject
. D ADD^C0XF2N(C0SGRF,MEDGRF,"sp:drugName",DSUBJ,FARY)
. I SIG'="" D ADD^C0XF2N(C0SGRF,MEDGRF,"sp:instructions",SIG,FARY)
. N NQTY,NQTY2,NFREQ,NFREQ2
. S NQTY=$$ANONS^C0XF2N ; anonomous subject
. D ADD^C0XF2N(C0SGRF,MEDGRF,"sp:quantity",NQTY,FARY)
. S NQTY2=$$ANONS^C0XF2N ; anonomous subject
. D ADD^C0XF2N(C0SGRF,NQTY,"sp:ValueAndUnit",NQTY2,FARY)
. N DOSE S DOSE=$G(C0SARY("med",ZI,"doses.dose@dose"))
. I DOSE="" S DOSE="UNKNOWN"
. N UNIT S UNIT=$G(C0SARY("med",ZI,"doses.dose@units"))
. I UNIT="" S UNIT="UNKNOWN"
. D ADD^C0XF2N(C0SGRF,NQTY2,"sp:value",DOSE,FARY)
. D ADD^C0XF2N(C0SGRF,NQTY2,"sp:unit",UNIT,FARY)
. S NFREQ=$$ANONS^C0XF2N ; anonomous subject
. S NFREQ2=$$ANONS^C0XF2N ; anonomous subject
. D ADD^C0XF2N(C0SGRF,MEDGRF,"sp:frequency",NFREQ,FARY)
. D ADD^C0XF2N(C0SGRF,NFREQ,"sp:ValueAndUnit",NFREQ2,FARY)
. N SCHED S SCHED=$G(C0SARY("med",ZI,"doses.dose@schedule"))
. I SCHED="" S SCHED="UNKNOWN"
. N SCHUNIT S SCHUNIT=$G(C0SARY("med",ZI,"doses.dose@route"))
. I SCHUNIT="" S SCHUNIT="UNKNOWN"
. D ADD^C0XF2N(C0SGRF,NFREQ2,"sp:value",SCHED,FARY)
. D ADD^C0XF2N(C0SGRF,NFREQ2,"sp:unit",SCHUNIT,FARY)
. D ADD^C0XF2N(C0SGRF,DSUBJ,"rdf:type","sp:CodedValue",FARY)
. D ADD^C0XF2N(C0SGRF,DSUBJ,"sp:code","rxnorm:"_RXNORM,FARY)
. D ADD^C0XF2N(C0SGRF,"rxnorm:"_RXNORM,"rdf:type","sp:Code",FARY)
. D ADD^C0XF2N(C0SGRF,"rxnorm:"_RXNORM,"dcterms:title",DNAME,FARY)
. D ADD^C0XF2N(C0SGRF,"rxnorm:"_RXNORM,"sp:system","rxnorm:",FARY)
. D ADD^C0XF2N(C0SGRF,"rxnorm:"_RXNORM,"dcterms:identifier",RXNORM,FARY)
. D ADD^C0XF2N(C0SGRF,DSUBJ,"dcterms:title",DNAME,FARY)
. D ADD^C0XF2N(C0SGRF,MEDGRF,"sp:startDate",SDATE,FARY)
. D ADD^C0XF2N(C0SGRF,"rxnorm:"_RXNORM,"rdf:type","http://smartplatforms.org/terms/codes/RxNorm_Semantic",FARY)
. D BULKLOAD^C0XF2N(.C0XFDA)
. K C0XFDA
S GRTN=C0SGRF
q
;
RXNFN() Q 1130590011.001 ; RxNorm Concepts file number
;
RXCUI(ZVUID) ; EXTRINSIC WHICH RETURNS THE RXNORM CODE IF KNOWN OF
; THE VUID - RETURNS CODE^SYSTEM^VERSION TO USE IN THE CCR
N ZRSLT S ZRSLT=ZVUID_"^"_"VUID"_"^" ; DEFAULT
I $G(ZVUID)="" Q ""
I '$D(^C0P("RXN")) Q ZRSLT ; ERX NOT INSTALLED
N C0PIEN ; S C0PIEN=$$FIND1^DIC($$RXNFN,"","QX",ZVUID,"VUID")
S C0PIEN=$O(^C0P("RXN","VUID",ZVUID,"")) ;GPL FIX FOR MULTIPLES
N ZRXN S ZRXN=$$GET1^DIQ($$RXNFN,C0PIEN,.01)
S ZRXN=$$NISTMAP(ZRXN) ; CHANGE THE CODE IF NEEDED
I ZRXN'="" S ZRSLT=ZRXN_"^RXNORM^08AB_081201F"
Q ZRSLT
;
NISTMAP(ZRXN) ; EXTRINSIC WHICH MAPS SOME RXNORM NUMBERS TO
; CONFORM TO NIST REQUIREMENTS
;INPATIENT CERTIFICATION
I ZRXN=309362 S ZRXN=213169
I ZRXN=855318 S ZRXN=855320
I ZRXN=197361 S ZRXN=212549
;OUTPATIENT CERTIFICATION
I ZRXN=310534 S ZRXN=205875
I ZRXN=617312 S ZRXN=617314
I ZRXN=310429 S ZRXN=200801
I ZRXN=628953 S ZRXN=628958
I ZRXN=745679 S ZRXN=630208
I ZRXN=311564 S ZRXN=979334
I ZRXN=836343 S ZRXN=836370
Q ZRXN
;