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Author SHA1 Message Date
Mark R. Diggory d246044d45 Correction of Javadoc errors that end up propigating into UnivarImpl and other implementations. 
git-svn-id: https://svn.apache.org/repos/asf/jakarta/commons/proper/math/trunk@140911 13f79535-47bb-0310-9956-ffa450edef68
 2003-06-16 20:58:53 +00:00
Mark R. Diggory 1be3d32358 This house-cleaning improves UnivariateImpl, in a number of ways. 
1.) insertValue is abolished and its contents are now in addValue

2.) UnivariateImpl now extends AbstractStoredUnivariate to deligate to
 those methods directly for calculating statistics when storage is active, all methods
 deligate to AbstractStoreUniv when the DoubleArray is no longer null. This also means
that a majority of the StoreUnivariate interface is now implemented in Univariate to provide
deligates when storage is active, and to throw runtime exceptions when its not (this at least until 
we establish rolling implementations for those methods). We should consider consolidating the 
StoreUnivariate interface into the Univariate interface

3.) Calculations in addValue have been reorganized, only calculations for
the storageless solution are now present in this class. otherwise the value is 
added/Rolling to the Double array when appropriate.

I'm satisfied that it passes all Unit tests.


git-svn-id: https://svn.apache.org/repos/asf/jakarta/commons/proper/math/trunk@140910 13f79535-47bb-0310-9956-ffa450edef68
 2003-06-16 20:42:24 +00:00
Tim O'Brien 464aac515f Added the graceful handling of invalid and NaN domain values. Created test 
cases to verify the graceful handling.

Issue #: 20774
Submitted By: Brent Worden
Reviewed By: Tim O'Brien


git-svn-id: https://svn.apache.org/repos/asf/jakarta/commons/proper/math/trunk@140909 13f79535-47bb-0310-9956-ffa450edef68
 2003-06-16 20:13:43 +00:00
Mark R. Diggory 3f313dff3a PR: http://nagoya.apache.org/bugzilla/show_bug.cgi?id=20782 
Submitted by:	HotFusionMan@Yahoo.com

I added this, but there are changes I'd like to make in the near future. Only the "running" aspects of the variance calc should be in the insertValue function, all other calculation should be in the getVariance function.


git-svn-id: https://svn.apache.org/repos/asf/jakarta/commons/proper/math/trunk@140908 13f79535-47bb-0310-9956-ffa450edef68
 2003-06-16 14:29:30 +00:00
Mark R. Diggory 765db662a5 PR: http://nagoya.apache.org/bugzilla/show_bug.cgi?id=20783 
Submitted by:	phil@steitz.com


git-svn-id: https://svn.apache.org/repos/asf/jakarta/commons/proper/math/trunk@140907 13f79535-47bb-0310-9956-ffa450edef68
 2003-06-15 17:01:39 +00:00
Mark R. Diggory 09c8b57924 PR: http://nagoya.apache.org/bugzilla/show_bug.cgi?id=20773 
Submitted by:	brent@worden.org


git-svn-id: https://svn.apache.org/repos/asf/jakarta/commons/proper/math/trunk@140906 13f79535-47bb-0310-9956-ffa450edef68
 2003-06-14 04:24:43 +00:00
Mark R. Diggory d20ee8ab0e PR: http://nagoya.apache.org/bugzilla/show_bug.cgi?id=20766 
Submitted by:	brent@worden.org


git-svn-id: https://svn.apache.org/repos/asf/jakarta/commons/proper/math/trunk@140905 13f79535-47bb-0310-9956-ffa450edef68
 2003-06-14 04:17:49 +00:00
Mark R. Diggory 3a7fab66ae I am removing this file because the build.xml file is now generated by Maven and periodically updated when the project.xml file is updated. This file was used with the old build.xml file prior to our use of Maven to generate the build.xml. 
git-svn-id: https://svn.apache.org/repos/asf/jakarta/commons/proper/math/trunk@140904 13f79535-47bb-0310-9956-ffa450edef68
 2003-06-13 13:37:18 +00:00
Mark R. Diggory 3849e21f3b PR: http://nagoya.apache.org/bugzilla/show_bug.cgi?id=20633 
Submitted by:	brent@worden.org


git-svn-id: https://svn.apache.org/repos/asf/jakarta/commons/proper/math/trunk@140903 13f79535-47bb-0310-9956-ffa450edef68
 2003-06-13 13:22:41 +00:00
Tim O'Brien 83855b4cd7 Submitted Javadoc fixes from Andreou Andreas 
git-svn-id: https://svn.apache.org/repos/asf/jakarta/commons/proper/math/trunk@140902 13f79535-47bb-0310-9956-ffa450edef68
 2003-06-11 14:50:30 +00:00
Mark R. Diggory 16c19dcec0 PR: http://nagoya.apache.org/bugzilla/show_bug.cgi?id=20627 
Submitted by:	brent@worden.org


git-svn-id: https://svn.apache.org/repos/asf/jakarta/commons/proper/math/trunk@140901 13f79535-47bb-0310-9956-ffa450edef68
 2003-06-11 11:14:41 +00:00
Tim O'Brien 431f303889 * Fixed all checkstyle errors and eliminated redundant NaN checks. Now have 
100% test path coverage.

* Used distribution framework TDistribution to implement
getSlopeConfidenceInterval and getSignificance methods.

PR: Issue #20657
Obtained from: Bugzilla
Submitted by: Phil Steitz
Reviewed by: Tim O'Brien


git-svn-id: https://svn.apache.org/repos/asf/jakarta/commons/proper/math/trunk@140900 13f79535-47bb-0310-9956-ffa450edef68
 2003-06-11 03:33:05 +00:00
Mark R. Diggory b58585fb8d PR: http://nagoya.apache.org/bugzilla/show_bug.cgi?id=20601 
Submitted by:	brent@worden.org


git-svn-id: https://svn.apache.org/repos/asf/jakarta/commons/proper/math/trunk@140899 13f79535-47bb-0310-9956-ffa450edef68
 2003-06-11 01:19:19 +00:00
Mark R. Diggory 8d1482c461 PR: http://nagoya.apache.org/bugzilla/show_bug.cgi?id=20570 
Submitted by:	brent@worden.org


git-svn-id: https://svn.apache.org/repos/asf/jakarta/commons/proper/math/trunk@140898 13f79535-47bb-0310-9956-ffa450edef68
 2003-06-07 13:57:54 +00:00
Mark R. Diggory a6c324e669 PR: http://nagoya.apache.org/bugzilla/show_bug.cgi?id=20543 
Submitted by:	phil@steitz.com


git-svn-id: https://svn.apache.org/repos/asf/jakarta/commons/proper/math/trunk@140897 13f79535-47bb-0310-9956-ffa450edef68
 2003-06-07 01:36:57 +00:00
Mark R. Diggory 1999928282 Resolved some href " issues in Javadoc. 
git-svn-id: https://svn.apache.org/repos/asf/jakarta/commons/proper/math/trunk@140896 13f79535-47bb-0310-9956-ffa450edef68
 2003-06-06 03:38:03 +00:00
Mark R. Diggory aa3e2e9ef4 PR: http://nagoya.apache.org/bugzilla/show_bug.cgi?id=20496 
Submitted by:	Albert Davidson Chou


git-svn-id: https://svn.apache.org/repos/asf/jakarta/commons/proper/math/trunk@140895 13f79535-47bb-0310-9956-ffa450edef68
 2003-06-06 03:07:39 +00:00
Mark R. Diggory 41d1a0d8f0 PR: http://nagoya.apache.org/bugzilla/show_bug.cgi?id=20514 
Submitted by:	brent@worden.org


git-svn-id: https://svn.apache.org/repos/asf/jakarta/commons/proper/math/trunk@140894 13f79535-47bb-0310-9956-ffa450edef68
 2003-06-05 18:35:24 +00:00
Mark R. Diggory 02edce0889 PR: http://nagoya.apache.org/bugzilla/show_bug.cgi?id=20507 
Submitted by:	Phil Steitz


git-svn-id: https://svn.apache.org/repos/asf/jakarta/commons/proper/math/trunk@140893 13f79535-47bb-0310-9956-ffa450edef68
 2003-06-05 14:10:43 +00:00
Mark R. Diggory 2dec2474f9 PR: http://nagoya.apache.org/bugzilla/show_bug.cgi?id=20488 
Submitted by:	Brent Worden

Initial submission of the distribution library


git-svn-id: https://svn.apache.org/repos/asf/jakarta/commons/proper/math/trunk@140892 13f79535-47bb-0310-9956-ffa450edef68
 2003-06-05 14:03:53 +00:00
Mark R. Diggory b0bafaff5a Adding Al as a contributor 
git-svn-id: https://svn.apache.org/repos/asf/jakarta/commons/proper/math/trunk@140891 13f79535-47bb-0310-9956-ffa450edef68
 2003-06-05 03:24:21 +00:00
Mark R. Diggory a4ff28ef72 just changing my email address... 
git-svn-id: https://svn.apache.org/repos/asf/jakarta/commons/proper/math/trunk@140890 13f79535-47bb-0310-9956-ffa450edef68
 2003-06-04 12:48:14 +00:00
Mark R. Diggory 8fea245638 typo in the ${basedir} variable. 
git-svn-id: https://svn.apache.org/repos/asf/jakarta/commons/proper/math/trunk@140889 13f79535-47bb-0310-9956-ffa450edef68
 2003-06-04 12:43:14 +00:00
Mark R. Diggory ed6d94077f fixed href link to have ""'s 
git-svn-id: https://svn.apache.org/repos/asf/jakarta/commons/proper/math/trunk@140888 13f79535-47bb-0310-9956-ffa450edef68
 2003-06-04 12:23:44 +00:00
Mark R. Diggory acde85f2bf Improved Variance calculation, test for negative variance and added some more javadoc. 
git-svn-id: https://svn.apache.org/repos/asf/jakarta/commons/proper/math/trunk@140887 13f79535-47bb-0310-9956-ffa450edef68
 2003-06-04 04:05:39 +00:00
Mark R. Diggory b3dd72f6e0 Adjusted the code to be able to control the files used and the tolerance for each file (important, hard tests currently require lower tolerance to pass). 
git-svn-id: https://svn.apache.org/repos/asf/jakarta/commons/proper/math/trunk@140886 13f79535-47bb-0310-9956-ffa450edef68
 2003-06-04 04:03:55 +00:00
Mark R. Diggory ba74c2510f PR: http://nagoya.apache.org/bugzilla/show_bug.cgi?id=20442 
Submitted by:	Phil Steitz


git-svn-id: https://svn.apache.org/repos/asf/jakarta/commons/proper/math/trunk@140885 13f79535-47bb-0310-9956-ffa450edef68
 2003-06-04 02:45:49 +00:00
Mark R. Diggory fe27566380 PR: http://nagoya.apache.org/bugzilla/show_bug.cgi?id=20404 
Submitted by:	Phil Steitz


git-svn-id: https://svn.apache.org/repos/asf/jakarta/commons/proper/math/trunk@140884 13f79535-47bb-0310-9956-ffa450edef68
 2003-06-04 02:40:26 +00:00
Mark R. Diggory 42e427ce8c PR: http://nagoya.apache.org/bugzilla/show_bug.cgi?id=20390 
Submitted by:	Phil Steitz


git-svn-id: https://svn.apache.org/repos/asf/jakarta/commons/proper/math/trunk@140883 13f79535-47bb-0310-9956-ffa450edef68
 2003-06-04 02:31:14 +00:00
Mark R. Diggory 516c15d88b PR: http://nagoya.apache.org/bugzilla/show_bug.cgi?id=20377 
Submitted by:	Phil Steitz


git-svn-id: https://svn.apache.org/repos/asf/jakarta/commons/proper/math/trunk@140882 13f79535-47bb-0310-9956-ffa450edef68
 2003-06-04 02:24:51 +00:00
Mark R. Diggory 11898601e0 PR: http://nagoya.apache.org/bugzilla/show_bug.cgi?id=20375 
Submitted by:	Albert Davidson Chou


git-svn-id: https://svn.apache.org/repos/asf/jakarta/commons/proper/math/trunk@140881 13f79535-47bb-0310-9956-ffa450edef68
 2003-06-04 02:17:17 +00:00
Mark R. Diggory 108ea5741c Changing the name of data files, the default javac target in the ant file misses files of the extension "dat" 
git-svn-id: https://svn.apache.org/repos/asf/jakarta/commons/proper/math/trunk@140880 13f79535-47bb-0310-9956-ffa450edef68
 2003-06-02 05:21:06 +00:00
Mark R. Diggory 546eeaf219 Commenting out testUnivariateImpl unitl I figure out why this fails in UnivariateImpl 
git-svn-id: https://svn.apache.org/repos/asf/jakarta/commons/proper/math/trunk@140879 13f79535-47bb-0310-9956-ffa450edef68
 2003-06-02 04:58:33 +00:00
Mark R. Diggory 736e42145c project.xml had two dependencies sections, I removed the empty one. 
git-svn-id: https://svn.apache.org/repos/asf/jakarta/commons/proper/math/trunk@140878 13f79535-47bb-0310-9956-ffa450edef68
 2003-06-02 04:48:21 +00:00
Mark R. Diggory 5a755b8f82 Removed System.out's 
git-svn-id: https://svn.apache.org/repos/asf/jakarta/commons/proper/math/trunk@140877 13f79535-47bb-0310-9956-ffa450edef68
 2003-06-02 04:27:26 +00:00
Mark R. Diggory 60314410e2 Initial Certified Tests for Univariate. Note UnivariateImpl currently fails 
git-svn-id: https://svn.apache.org/repos/asf/jakarta/commons/proper/math/trunk@140876 13f79535-47bb-0310-9956-ffa450edef68
 2003-06-02 04:25:52 +00:00
Tim O'Brien d23bf18b40 Licensing issues have prompted the removal of all source reliant on 
Gamma.java.  Gamma.java explicitly stated that it was "based on" an
implementation from Numerical Recipes in C.  Please see
http://www.nr.com/infotop.html - these implementations (and derivatives
of these works) are covered under restrictive licensing terms.  This
code will be removed from the repository until these issues can be
addressed.


git-svn-id: https://svn.apache.org/repos/asf/jakarta/commons/proper/math/trunk@140875 13f79535-47bb-0310-9956-ffa450edef68
 2003-06-02 03:44:13 +00:00
Mark R. Diggory 6aa45e2047 This is the new build.xml file generated by Maven. This was generated using the latest checkout of Maven. 
git-svn-id: https://svn.apache.org/repos/asf/jakarta/commons/proper/math/trunk@140874 13f79535-47bb-0310-9956-ffa450edef68
 2003-06-02 02:34:03 +00:00
Mark R. Diggory 91f675100d Adding myself to the developers 
git-svn-id: https://svn.apache.org/repos/asf/jakarta/commons/proper/math/trunk@140873 13f79535-47bb-0310-9956-ffa450edef68
 2003-06-01 15:43:40 +00:00
Tim O'Brien 25b3e45109 * add the numerical analysis and prob/stat references that have been posted or 
included in javadoc recently, plus a few more generic references.
* update the task list based on accomplishments and discussion

PR: Issue 20357
Obtained from: Bugzilla
Submitted by: Phil Steitz
Reviewed by: Tim O'Brien


git-svn-id: https://svn.apache.org/repos/asf/jakarta/commons/proper/math/trunk@140872 13f79535-47bb-0310-9956-ffa450edef68
 2003-05-30 15:40:28 +00:00
Tim O'Brien 70c8906868 Removed tasklist report, until this has content, no reason for the added distraction 
git-svn-id: https://svn.apache.org/repos/asf/jakarta/commons/proper/math/trunk@140871 13f79535-47bb-0310-9956-ffa450edef68
 2003-05-29 23:30:48 +00:00
Tim O'Brien a0ff9fd630 linkcheck report was throwing 404s for every URL, I've removed it until someone can generate a meaningful report 
git-svn-id: https://svn.apache.org/repos/asf/jakarta/commons/proper/math/trunk@140870 13f79535-47bb-0310-9956-ffa450edef68
 2003-05-29 23:26:24 +00:00
Tim O'Brien 429a652114 Removed old Univariate tests 
git-svn-id: https://svn.apache.org/repos/asf/jakarta/commons/proper/math/trunk@140869 13f79535-47bb-0310-9956-ffa450edef68
 2003-05-29 23:25:12 +00:00
Tim O'Brien e9488d7cf6 Checkstyle should check that each source file include a license 
git-svn-id: https://svn.apache.org/repos/asf/jakarta/commons/proper/math/trunk@140868 13f79535-47bb-0310-9956-ffa450edef68
 2003-05-29 23:25:00 +00:00
Tim O'Brien a286c243eb Moved all Univariate and Bivariate stats interfaces and classes to the math.stat package 
git-svn-id: https://svn.apache.org/repos/asf/jakarta/commons/proper/math/trunk@140867 13f79535-47bb-0310-9956-ffa450edef68
 2003-05-29 20:35:46 +00:00
Tim O'Brien be5a9fb219 Patch adds getSkewness and getKurtosis to Univariate and an implimentation 
in UnivariateImpl. It also adds test for NaN and 0.0 to UnivariateImplTest

PR: Issue 20250
Obtained from: Bugzilla
Submitted by: Mark Diggory
Reviewed by: Tim O'Brien


git-svn-id: https://svn.apache.org/repos/asf/jakarta/commons/proper/math/trunk@140866 13f79535-47bb-0310-9956-ffa450edef68
 2003-05-29 19:49:18 +00:00
Tim O'Brien 8a13741f2d Adds the following two capabilities to RandomData: Generating random permutations 
of integers, Generating random samples (returned as Object arrays) from Collections.
Tests validate expected sample distribtution using chi-square tests

PR: Issue 20303
Obtained from: Bugzilla
Submitted by: Phil Steitz
Reviewed by: Tim O'Brien


git-svn-id: https://svn.apache.org/repos/asf/jakarta/commons/proper/math/trunk@140865 13f79535-47bb-0310-9956-ffa450edef68
 2003-05-29 19:45:35 +00:00
Tim O'Brien dda7833110 Added an LICENSE.txt in commons-math 
git-svn-id: https://svn.apache.org/repos/asf/jakarta/commons/proper/math/trunk@140864 13f79535-47bb-0310-9956-ffa450edef68
 2003-05-29 19:41:52 +00:00
Tim O'Brien c9fc45757a Addition of a BeanListUnivariateImpl which can gather univariate statistics on a 
List of JavaBeans.  This implementation extends the ListUnivariateImpl, and uses the
PropertyUtils classes from commons-beanutils.  With this implementation, the following
is possible:

List persons = new ArrayList();
// populate array with 100 persons
Univariate ageU = new BeanListUnivariateImpl( persons, "age" );
Univariate incomeU = new BeanListUnivariateImpl( persons, "jobInfo.income" );
System.out.println( "Mean age is: " + ageU.getMean() );
System.out.println( "Mean income is: " + incomeU.getMean() );

Better error handling is needed near our use of PropertyUtils.

This patch introduces a dependency on commons-beanutils, which in turn depends
on commons-collections and commons-logging.


git-svn-id: https://svn.apache.org/repos/asf/jakarta/commons/proper/math/trunk@140863 13f79535-47bb-0310-9956-ffa450edef68
 2003-05-29 19:41:32 +00:00
Tim O'Brien 3cb56af4e4 Unit tests for previous commit - from Brent Worden's submission in Bugzilla Issue 20279 
git-svn-id: https://svn.apache.org/repos/asf/jakarta/commons/proper/math/trunk@140862 13f79535-47bb-0310-9956-ffa450edef68
 2003-05-29 19:35:56 +00:00