Commit Graph

2100 Commits

Author SHA1 Message Date
Sebastian Bazley acdd9f2805 Fix typo in copy() code
git-svn-id: https://svn.apache.org/repos/asf/commons/proper/math/trunk@902934 13f79535-47bb-0310-9956-ffa450edef68
2010-01-25 19:09:17 +00:00
Sebastian Bazley a15507466b Does not make sense for count variable to be public
git-svn-id: https://svn.apache.org/repos/asf/commons/proper/math/trunk@902931 13f79535-47bb-0310-9956-ffa450edef68
2010-01-25 19:05:00 +00:00
Sebastian Bazley 52ec13ba7d Make private static fields final
git-svn-id: https://svn.apache.org/repos/asf/commons/proper/math/trunk@902930 13f79535-47bb-0310-9956-ffa450edef68
2010-01-25 19:04:32 +00:00
Sebastian Bazley d6fc4d3fba Document field thread-safety
git-svn-id: https://svn.apache.org/repos/asf/commons/proper/math/trunk@902929 13f79535-47bb-0310-9956-ffa450edef68
2010-01-25 19:03:56 +00:00
Sebastian Bazley 4487658a3a Make private constant final
git-svn-id: https://svn.apache.org/repos/asf/commons/proper/math/trunk@902928 13f79535-47bb-0310-9956-ffa450edef68
2010-01-25 19:03:26 +00:00
Sebastian Bazley 517f665a54 Fix may be null warnings
git-svn-id: https://svn.apache.org/repos/asf/commons/proper/math/trunk@902216 13f79535-47bb-0310-9956-ffa450edef68
2010-01-22 18:41:18 +00:00
Sebastian Bazley dcc3a769f6 FIx deprecation warnings
git-svn-id: https://svn.apache.org/repos/asf/commons/proper/math/trunk@902215 13f79535-47bb-0310-9956-ffa450edef68
2010-01-22 18:40:55 +00:00
Sebastian Bazley 36a706e811 Javadoc fixes
git-svn-id: https://svn.apache.org/repos/asf/commons/proper/math/trunk@902214 13f79535-47bb-0310-9956-ffa450edef68
2010-01-22 18:40:28 +00:00
Sebastian Bazley 42a5482d7a Fix missing @Override and @Deprecated annotations
git-svn-id: https://svn.apache.org/repos/asf/commons/proper/math/trunk@902203 13f79535-47bb-0310-9956-ffa450edef68
2010-01-22 18:27:41 +00:00
Sebastian Bazley 5a91cbf932 Remove suite() methods
git-svn-id: https://svn.apache.org/repos/asf/commons/proper/math/trunk@902201 13f79535-47bb-0310-9956-ffa450edef68
2010-01-22 18:18:16 +00:00
Sebastian Bazley 0eba4a5c31 Unused import
git-svn-id: https://svn.apache.org/repos/asf/commons/proper/math/trunk@902200 13f79535-47bb-0310-9956-ffa450edef68
2010-01-22 18:12:08 +00:00
Sebastian Bazley 0b2f3f21c1 Ignore lib/
git-svn-id: https://svn.apache.org/repos/asf/commons/proper/math/trunk@902187 13f79535-47bb-0310-9956-ffa450edef68
2010-01-22 17:45:24 +00:00
Sebastian Bazley f9a50b290d Synch. with test cases listed in pom.xml
git-svn-id: https://svn.apache.org/repos/asf/commons/proper/math/trunk@902089 13f79535-47bb-0310-9956-ffa450edef68
2010-01-22 14:06:57 +00:00
Luc Maisonobe 3bac1ef344 fixed link typo
git-svn-id: https://svn.apache.org/repos/asf/commons/proper/math/trunk@900457 13f79535-47bb-0310-9956-ffa450edef68
2010-01-18 16:54:00 +00:00
Luc Maisonobe 5776f21e54 improved javadoc
git-svn-id: https://svn.apache.org/repos/asf/commons/proper/math/trunk@900451 13f79535-47bb-0310-9956-ffa450edef68
2010-01-18 16:31:18 +00:00
Phil Steitz 6dd3724b9b Fixed regression in Frequency.getPct(Object) introduced in 2.0. Cumulative
percent was being returned for Object arguments in place of percent.

JIRA: MATH-329
Reported by Will Wu

git-svn-id: https://svn.apache.org/repos/asf/commons/proper/math/trunk@900016 13f79535-47bb-0310-9956-ffa450edef68
2010-01-16 20:01:17 +00:00
Luc Maisonobe b2f3f6db41 Singular Value Decomposition now computes either the compact SVD (using only positive singular values) or truncated SVD (using a user-specified maximal number of singular values).
Fixed Singular Value Decomposition solving of singular systems.
JIRA: MATH-320, MATH-321


git-svn-id: https://svn.apache.org/repos/asf/commons/proper/math/trunk@894908 13f79535-47bb-0310-9956-ffa450edef68
2009-12-31 17:52:16 +00:00
Phil Steitz 81ae49bafe Updated to reflect recent commits.
git-svn-id: https://svn.apache.org/repos/asf/commons/proper/math/trunk@894738 13f79535-47bb-0310-9956-ffa450edef68
2009-12-30 23:26:40 +00:00
Luc Maisonobe c06cc933b6 changed SVD to compute either compact SVD (using only positive singular values)
or truncated SVD (using only singular values up to a user-specified max number)
started fix of SVD solver that did not compute a least square solution
the fix is not complete yet as it seems the solution does not really gives the
smallest possible residuals. See for example the commented out parts of
testMath320A in SingularValueSolverTest.
JIRA: MATH-320

git-svn-id: https://svn.apache.org/repos/asf/commons/proper/math/trunk@894735 13f79535-47bb-0310-9956-ffa450edef68
2009-12-30 23:17:01 +00:00
Phil Steitz 52c9e2a2f8 Added gcd(long, long), lcm(long, long) methods. JIRA: MATH-239.
git-svn-id: https://svn.apache.org/repos/asf/commons/proper/math/trunk@894730 13f79535-47bb-0310-9956-ffa450edef68
2009-12-30 23:03:23 +00:00
Phil Steitz 2d247ea48f Added @since tags for new methods. JIRA: MATH-287
git-svn-id: https://svn.apache.org/repos/asf/commons/proper/math/trunk@894705 13f79535-47bb-0310-9956-ffa450edef68
2009-12-30 20:24:54 +00:00
Phil Steitz 0571fc07de Deprecated addValue(Integer). JIRA: MATH-260.
git-svn-id: https://svn.apache.org/repos/asf/commons/proper/math/trunk@894529 13f79535-47bb-0310-9956-ffa450edef68
2009-12-30 01:27:40 +00:00
Phil Steitz 0920122ae6 Changed weighted variance computational formula to use Chan-Golub method (consistent with unweighted version).
git-svn-id: https://svn.apache.org/repos/asf/commons/proper/math/trunk@894528 13f79535-47bb-0310-9956-ffa450edef68
2009-12-30 01:03:32 +00:00
Phil Steitz e193fc40fd Fixed type from r894472. JIRA: MATH-287
git-svn-id: https://svn.apache.org/repos/asf/commons/proper/math/trunk@894474 13f79535-47bb-0310-9956-ffa450edef68
2009-12-29 20:02:37 +00:00
Phil Steitz 6faddc04de Added WeightedEvaluation interface and added evaluate(values, weights) to weighted statistics implementations. JIRA: MATH-287.
git-svn-id: https://svn.apache.org/repos/asf/commons/proper/math/trunk@894472 13f79535-47bb-0310-9956-ffa450edef68
2009-12-29 19:57:49 +00:00
Phil Steitz 8f6e7936c6 Fixed contributor alpha sort.
git-svn-id: https://svn.apache.org/repos/asf/commons/proper/math/trunk@894406 13f79535-47bb-0310-9956-ffa450edef68
2009-12-29 15:01:38 +00:00
Luc Maisonobe ce185345fa fixed a wrong implementation of the Linf vector norm
JIRA: MATH-326

git-svn-id: https://svn.apache.org/repos/asf/commons/proper/math/trunk@894367 13f79535-47bb-0310-9956-ffa450edef68
2009-12-29 12:24:58 +00:00
Luc Maisonobe 3c122e41b1 fixed checkstyle warnings
git-svn-id: https://svn.apache.org/repos/asf/commons/proper/math/trunk@894187 13f79535-47bb-0310-9956-ffa450edef68
2009-12-28 15:30:03 +00:00
Luc Maisonobe cb75cc3458 improved test coverage (now somewhere between 99% and 100%)
git-svn-id: https://svn.apache.org/repos/asf/commons/proper/math/trunk@894186 13f79535-47bb-0310-9956-ffa450edef68
2009-12-28 15:23:23 +00:00
Luc Maisonobe 9f547049c3 fixed a few remaining unnecessary copy
added more constructors

git-svn-id: https://svn.apache.org/repos/asf/commons/proper/math/trunk@894185 13f79535-47bb-0310-9956-ffa450edef68
2009-12-28 15:21:00 +00:00
Luc Maisonobe 6f74aee73d fixed a forgotten replacement of divide method
JIRA: MATH-307

git-svn-id: https://svn.apache.org/repos/asf/commons/proper/math/trunk@894109 13f79535-47bb-0310-9956-ffa450edef68
2009-12-27 21:06:21 +00:00
Luc Maisonobe 97a9dcf29e adding rounding mode and scale as per 1.2
JIRA: MATH-307

git-svn-id: https://svn.apache.org/repos/asf/commons/proper/math/trunk@894107 13f79535-47bb-0310-9956-ffa450edef68
2009-12-27 20:03:08 +00:00
Luc Maisonobe d3b9c7f965 removed support for non-zero default values in OpenMapRealVector
JIRA: MATH-312

git-svn-id: https://svn.apache.org/repos/asf/commons/proper/math/trunk@894093 13f79535-47bb-0310-9956-ffa450edef68
2009-12-27 18:48:16 +00:00
Luc Maisonobe a5e03a2389 added tests showing that issues MATH-303 and MATH-304 are both invalid.
Jira: MATH-303, MATH-304

git-svn-id: https://svn.apache.org/repos/asf/commons/proper/math/trunk@894083 13f79535-47bb-0310-9956-ffa450edef68
2009-12-27 17:33:37 +00:00
Luc Maisonobe 95f2dd6f5f Fixed a convergence discrepancy with respect to theory in Gragg-Bulirsch-Stoer integrator.
JIRA: MATH-324


git-svn-id: https://svn.apache.org/repos/asf/commons/proper/math/trunk@893281 13f79535-47bb-0310-9956-ffa450edef68
2009-12-22 19:30:10 +00:00
Luc Maisonobe 204990415d Fixed a wrong dimension check in SVD solver
thanks to Dimitri for identifying and solving this

git-svn-id: https://svn.apache.org/repos/asf/commons/proper/math/trunk@891436 13f79535-47bb-0310-9956-ffa450edef68
2009-12-16 21:44:13 +00:00
William Barker 01e5f22cc5 Add an optimized dotProduct to OpenMapRealVector.
Slightly modified from contribution by Jake Mannix.
JIRA: MATH-317


git-svn-id: https://svn.apache.org/repos/asf/commons/proper/math/trunk@890159 13f79535-47bb-0310-9956-ffa450edef68
2009-12-14 02:53:40 +00:00
William Barker b26de3b0aa Removing the mapTo* metheds from OpenMapRealVector, and use the base class methods instead
git-svn-id: https://svn.apache.org/repos/asf/commons/proper/math/trunk@890023 13f79535-47bb-0310-9956-ffa450edef68
2009-12-13 04:27:34 +00:00
Luc Maisonobe 6a5848130f added composition features for real functions
JIRA: MATH-313

git-svn-id: https://svn.apache.org/repos/asf/commons/proper/math/trunk@890002 13f79535-47bb-0310-9956-ffa450edef68
2009-12-12 23:15:32 +00:00
Luc Maisonobe 06c388acc9 fixed checkstyle errors
git-svn-id: https://svn.apache.org/repos/asf/commons/proper/math/trunk@889999 13f79535-47bb-0310-9956-ffa450edef68
2009-12-12 23:11:01 +00:00
William Barker 1778991834 Initial fixes to the iterators.
This fixes the default sparseIterator problem where a RealVector only contains zero elements, and add a sparseIterator to the OpenMapRealVector.

Still TODO:
1) add unit tests
2) remove *mapTo and *mapToSelf from OpenMapRealVector
3) fix javadocs
4) remove support for non-zero default values in OpenMapRealVector 


git-svn-id: https://svn.apache.org/repos/asf/commons/proper/math/trunk@889516 13f79535-47bb-0310-9956-ffa450edef68
2009-12-11 06:38:20 +00:00
Luc Maisonobe 9e9048ccb5 Added mapping and iteration methods to vectors.
Provided a default implementation for the numerous simple methods in the RealVectorInterface.


git-svn-id: https://svn.apache.org/repos/asf/commons/proper/math/trunk@889008 13f79535-47bb-0310-9956-ffa450edef68
2009-12-09 22:56:11 +00:00
Luc Maisonobe 7fb69bcf38 added UnivariateRealFunction type implementations of the java.lang.Math methods
git-svn-id: https://svn.apache.org/repos/asf/commons/proper/math/trunk@889007 13f79535-47bb-0310-9956-ffa450edef68
2009-12-09 22:49:24 +00:00
Luc Maisonobe c0f87c7000 removed trailing whitespace
git-svn-id: https://svn.apache.org/repos/asf/commons/proper/math/trunk@889006 13f79535-47bb-0310-9956-ffa450edef68
2009-12-09 22:46:36 +00:00
Sebastian Bazley a97a14915d Unnecessary casts
git-svn-id: https://svn.apache.org/repos/asf/commons/proper/math/trunk@888685 13f79535-47bb-0310-9956-ffa450edef68
2009-12-09 02:37:00 +00:00
Sebastian Bazley b910285857 Unnecessary ;
git-svn-id: https://svn.apache.org/repos/asf/commons/proper/math/trunk@888684 13f79535-47bb-0310-9956-ffa450edef68
2009-12-09 02:36:28 +00:00
Sebastian Bazley 0f98e5c13d Tab police
git-svn-id: https://svn.apache.org/repos/asf/commons/proper/math/trunk@888683 13f79535-47bb-0310-9956-ffa450edef68
2009-12-09 02:34:11 +00:00
Sebastian Bazley e91eaa0c98 Unnecessary casts; tab police
git-svn-id: https://svn.apache.org/repos/asf/commons/proper/math/trunk@888680 13f79535-47bb-0310-9956-ffa450edef68
2009-12-09 02:30:02 +00:00
Luc Maisonobe f7c0b403d2 Fixed an error in handling of very close events during ODE integration
JIRA: MATH-322

git-svn-id: https://svn.apache.org/repos/asf/commons/proper/math/trunk@887794 13f79535-47bb-0310-9956-ffa450edef68
2009-12-06 23:04:55 +00:00
Luc Maisonobe 335572b99e Prevent NaN to occur for singular matrices
Numerical inaccuracies in the underlying eigendecomposition could induce
very small negative eigenvalues, so the square root produced NaNs. The
eigenvalues really cannot be negative, so it is safe to replace the negative
ones by 0.
There are remaining problems with singular matrices:
 - the singular vectors also contain NaNs
 - the solver does not really work in least square sense and
   complain about singular matrices
JIRA: MATH-320 

git-svn-id: https://svn.apache.org/repos/asf/commons/proper/math/trunk@885279 13f79535-47bb-0310-9956-ffa450edef68
2009-11-29 21:53:36 +00:00