hapi-fhir/hapi-fhir-cli/hapi-fhir-cli-app/pom.xml

126 lines
3.6 KiB
XML
Raw Normal View History

2016-01-28 11:36:59 -05:00
<project xmlns="http://maven.apache.org/POM/4.0.0" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:schemaLocation="http://maven.apache.org/POM/4.0.0 http://maven.apache.org/xsd/maven-4.0.0.xsd">
<modelVersion>4.0.0</modelVersion>
<!-- Note: HAPI projects use the "hapi-fhir" POM as their base to provide easy management. You do not need to use this in your own projects, so the "parent" tag
and it's contents below may be removed if you are using this file as a basis for your own project. -->
<parent>
<groupId>ca.uhn.hapi.fhir</groupId>
<artifactId>hapi-fhir-cli</artifactId>
Rel 6 2 5 mergeback (#4459) * jm wrong bundle entry url (#4213) * Bug test * here you go * Generate relative URIs for bundle entry.request.url, as specified * Point jira issue in changelog * Adjust tests to fixes Co-authored-by: juan.marchionatto <juan.marchionatto@smilecdr.com> Co-authored-by: Tadgh <garygrantgraham@gmail.com> * improved logging (#4217) Co-authored-by: Ken Stevens <ken@smilecdr.com> * Rel 6 1 3 mergeback (#4215) * Bump for CVE (#3856) * Bump for CVE * Bump spring-data version * Fix compile * Cut over to spring bom * Bump to RC1 * remove RC * do not contrain reindex for common SP updates (#3876) * only fast-track jobs with exactly one chunk (#3879) * Fix illegalstateexception when an exception is thrown during stream response (#3882) * Finish up changelog, minor refactor * reset buffer only * Hack for some replacements * Failure handling * wip * Fixed the issue (#3845) * Fixed the issue * Changelog modification * Changelog modification * Implemented seventh character extended code and the corresponding dis… (#3709) * Implemented seventh character extended code and the corresponding display * Modifications * Changes on previous test according to modifications made in ICD10-CM XML file * Subscription sending delete events being skipped (#3888) * fixed bug and added test * refactor * Update for CVE (#3895) * updated pointcuts to work as intended (#3903) * updated pointcuts to work as intended * added changelog * review fixes Co-authored-by: leif stawnyczy <leifstawnyczy@leifs-MacBook-Pro.local> * 3904 during $delete expunge job hibernate search indexed documents are left orphaned (#3905) * Add test and implementation * Add changelog * 3899 code in limits (#3901) * Add implementation, changelog, test * Update hapi-fhir-jpaserver-test-utilities/src/test/java/ca/uhn/fhir/jpa/provider/r4/ResourceProviderR4Test.java Co-authored-by: Ken Stevens <khstevens@gmail.com> Co-authored-by: Ken Stevens <khstevens@gmail.com> * 3884 overlapping searchparameter undetected rel 6 1 (#3909) * Applying all changes from previous dev branch to current one pointing to rel_6_1 * Fixing merge conflict related to Msg.code value. * Fixing Msg.code value. * Making checkstyle happy. * Making sure that all tests are passing. * Passing all tests after fixing Msg.code * Passing all tests. Co-authored-by: peartree <etienne.poirier@smilecdr.com> * 3745 - fixed NPE for bundle with duplicate conditional create resourc… (#3746) * 3745 - fixed NPE for bundle with duplicate conditional create resources and a conditional delete * created unit test for skip of delete operation while processing duplicating create entries * moved unit test to FhirSystemDaoR4Test * 3379 mdm fixes (#3906) * added MdmLinkCreateSvcimplTest * fixed creating mdm-link not setting the resource type correctly * fixed a bug where ResourcePersistenceId was being duplicated instead of passed on * Update hapi-fhir-jpaserver-mdm/src/test/java/ca/uhn/fhir/jpa/mdm/svc/MdmLinkCreateSvcImplTest.java Change order of tests such that assertEquals takes expected value then actual value Co-authored-by: jdar8 <69840459+jdar8@users.noreply.github.com> * added changelog, also changed a setup function in test to beforeeach Co-authored-by: Long Ma <long@smilecdr.com> Co-authored-by: jdar8 <69840459+jdar8@users.noreply.github.com> * Fix to the issue (#3855) * Fix to the issue * Progress * fixed the issue * Addressing suggestions * add response status code to MethodOutcome * Addressing suggestions Co-authored-by: Ken Stevens <ken@smilecdr.com> * Fix for caching appearing broken in batch2 for bulkexport jobs (#3912) * Respect caching in bullk export, fix bug with completed date on empty jobs * add changelog * Add impl * Add breaking test * Complete failing test * more broken tests * Fix more tests' * Fix paging bug * Fix another brittle test * 3915 do not collapse rules with filters (#3916) * do not attempt to merge compartment permissions with filters * changelog * Rename to IT for concurrency problems Co-authored-by: Tadgh <garygrantgraham@gmail.com> * Version bump * fix $mdm-submit output (#3917) Co-authored-by: Ken Stevens <ken@smilecdr.com> * Gl3407 bundle offset size (#3918) * begin with failing test * fixed * change log * rollback default count change and corresponding comments Co-authored-by: Ken Stevens <ken@smilecdr.com> * Offset interceptor now only works for external calls * Initialize some beans (esp interceptors) later in the boot process so they don't slow down startup. * do not reindex searchparam jobs on startup * Fix oracle non-enterprise attempting online index add (#3925) * 3922 delete expunge large dataset (#3923) * lower batchsize of delete requests so that we do not get sql exceptions * blah * fix test * updated tests to not fail Co-authored-by: leif stawnyczy <leifstawnyczy@leifs-MacBook-Pro.local> * add index * Fix up colun grab * Revert offset mode change * Revert fix for null/system request details checks for reindex purposes * Fix bug and add test for SP Validating Interceptor (#3930) * wip * Fix uptests * Fix index online test * Fix SP validating interceptor logic * Updating version to: 6.1.1 post release. * fix compile error * Deploy to sonatype (#3934) * adding sonatype profile to checkstyle module * adding sonatype profile to tinder module * adding sonatype profile to base pom * adding final deployToSonatype profile * wip * Revert version enum * Updating version to: 6.1.1 post release. * Add test, changelog, and implementation * Add backport info * Create failing test * Implemented the fix, fixed existing unit tests * added changelog * added test case for no filter, exclude 1 patient * wip * Add backport info * Add info of new version * Updating version to: 6.1.2 post release. * bump info and backport for 6.1.2 * Bump for hapi * Implement bug fixes, add new tests (#4022) * Implement bug fixes, add new tests * tidy * Tidy * refactor for cleaning * More tidying * Lower logging * Split into nested tests, rename, add todos * Typo * Code review * add backport info * Updating version to: 6.1.3 post release. * Updating version to: 6.1.3 post release. * removed duplicate mention of ver 6.1.3 in versionEnum * backport pr 4101 * mdm message key (#4111) * begin with failing test * fixed 2 tests * fix tests * fix tests * change log Co-authored-by: Ken Stevens <ken@smilecdr.com> * backport 6.1.3 docs changes * fixed typo on doc backport message * fix test breaking * Updating version to: 6.1.4 post release. * wip Co-authored-by: JasonRoberts-smile <85363818+JasonRoberts-smile@users.noreply.github.com> Co-authored-by: Qingyixia <106992634+Qingyixia@users.noreply.github.com> Co-authored-by: TipzCM <leif.stawnyczy@gmail.com> Co-authored-by: leif stawnyczy <leifstawnyczy@leifs-MacBook-Pro.local> Co-authored-by: Ken Stevens <khstevens@gmail.com> Co-authored-by: Etienne Poirier <33007955+epeartree@users.noreply.github.com> Co-authored-by: peartree <etienne.poirier@smilecdr.com> Co-authored-by: kateryna-mironova <107507153+kateryna-mironova@users.noreply.github.com> Co-authored-by: longma1 <32119004+longma1@users.noreply.github.com> Co-authored-by: Long Ma <long@smilecdr.com> Co-authored-by: jdar8 <69840459+jdar8@users.noreply.github.com> Co-authored-by: Ken Stevens <ken@smilecdr.com> Co-authored-by: markiantorno <markiantorno@gmail.com> Co-authored-by: Steven Li <steven@smilecdr.com> * pin okio-jvm for kotlin vuln (#4216) * Fix UrlUtil.unescape() by not escaping "+" to " " if this is an "application/..." _outputFormat. (#4220) * First commit: Failing unit test and a TODO with a vague idea of where the bug happens. * Don't escape "+" in a URL GET parameter if it starts with "application". * Remove unnecessary TODO. * Add changelog. * Code review feedback on naming. Also, make logic more robust by putting plus and should escape boolean && in parens. * Ks 20221031 migration lock (#4224) * started design * complete with tests * changelog * cleanup * tyop Co-authored-by: Ken Stevens <ken@smilecdr.com> * 4207-getpagesoffset-set-to-total-number-of-resources-results-in-inconsistent-amount-of-entries-when-requests-are-sent-consecutively (#4209) * Added test * Added solution * Changelog * Changes made based on comments * Fix bug with MDM submit * fix * Version bump * 4234 consent in conjunction with versionedapiconverterinterceptor fails (#4236) * Add constant for interceptor * add test, changelog * Allow Batch2 transition from ERRORED to COMPLETE (#4242) * Allow Batch2 transition from ERRORED to COMPLETE * Add changelog * Test fix Co-authored-by: James Agnew <james@jamess-mbp.lan> * 3685 When bulk exporting, if no resource type param is provided, defa… (#4233) * 3685 When bulk exporting, if no resource type param is provided, default to all registered types. * Update test case. * Cleaned up changelog. * Added test case for multiple resource types. * Added failing test case for not returning Binary resource. * Refactor solution. Co-authored-by: kylejule <kyle.jule@smilecdr.com> * Add next version * bulk export permanently reusing cached results (#4249) * Add test, fix bug, add changelog * minor refactor * Fix broken test * Smile 4892 DocumentReference Attachment url (#4237) * failing test * fix * increase test Attachment url size to new max * decrease limit to 500 * ci fix Co-authored-by: nathaniel.doef <nathaniel.doef@smilecdr.com> * Overlapping SearchParameter with the same code and base are not allowed (#4253) * Overlapping SearchParameter with the same code and base are not allowed * Fix existing tests according to changes * Cleanup dead code and remove related tests * Version Bump * ignore misfires in quartz * Allowing Failures On Index Drops (#4272) * Allowing failure on index drops. * Adding changeLog * Modification to changelog following code review. Co-authored-by: peartree <etienne.poirier@smilecdr.com> * Revert "ignore misfires in quartz" This reverts commit 15c74a46bc1fd9797b42ad6ddbe6ba34605975cb. * Ignore misfires in quartz (#4273) * Reindex Behaviour Issues (#4261) * fixmes for ND * address FIXME comments * fix tests * increase max retries * fix resource id chunking logic * fix test * add modular patient * change log * version bump Co-authored-by: Ken Stevens <ken@smilecdr.com> Co-authored-by: nathaniel.doef <nathaniel.doef@smilecdr.com> * Set official Version * license * Fix up numbers * Fix up numbers * Update numbers * wip * fix numbers * Fix test: * Fix more tests * TEMP FIX FOR BUILD * wip * Updating version to: 6.2.1 post release. * Add a whack of logging * wip * add implementation * wip and test * wip * last-second-fetch * expose useful method * remove 10000 limit * Strip some logging * Fix up logging * Unpublicize method * Fix version * Make minor changes * once again on 6.2.1 * re-add version enum * add folder * fix test * DIsable busted test * Disable more broken tests * Only submit queued chunks * Quiet log * Fix wrong pinned version * Updating version to: 6.2.2 post release. * fixes for https://github.com/hapifhir/hapi-fhir/issues/4277 and https… (#4291) * fixes for https://github.com/hapifhir/hapi-fhir/issues/4277 and https://github.com/hapifhir/hapi-fhir/issues/4276 * Credit for #4291 Co-authored-by: James Agnew <jamesagnew@gmail.com> * backport and changelog for 6.2.2 * Updating version to: 6.2.3 post release. * fix https://simpaticois.atlassian.net/browse/SMILE-5781 * Version bump to 6.2.3-SNAPSHOT * Auto retry on MDM Clear conflicts (#4398) * Auto-retry mdm-clear on conflict * Add changelog * Build fix * Disable failing test * Update to 6.2.3 again * Update license dates * Dont fail on batch2 double delivery (#4400) * Don't fail on Batch2 double delivery * Add changelog * Update docker for release ppipeline * Updating version to: 6.2.4 post release. * Add test and implementation to fix potential NPE in pre-show resources (#4388) * Add test and implementation to fix potential NPE in pre-show resources * add test * WIP getting identical test scenario * More robust solution * Finalize Code * Add changelog, move a bunch of changelogs * Remove not needed test * Minor refactor and reporting * Fix up megeback * update backport info * update backport info * Updating version to: 6.2.5 post release. * Prevent chunk from returning to in-progress unless it is errorred, in-progress, or queued * changelog * Update logger * Indicate backport * Add version and upgrade info. add backport * hapi-fhir side done * cdr side * add assert * add test * Fix import * prevent multiple reduction step runs in maintenance run (#4423) * setting job to inprog to prevent multiple maintenance passes from running reduction steps * added a new status Co-authored-by: leif stawnyczy <leifstawnyczy@leifs-mbp.home> * Add backport info * Fix up tests * Fix discrepancies * Fix test * Version bump * bump ips Co-authored-by: jmarchionatto <60409882+jmarchionatto@users.noreply.github.com> Co-authored-by: juan.marchionatto <juan.marchionatto@smilecdr.com> Co-authored-by: Ken Stevens <khstevens@gmail.com> Co-authored-by: Ken Stevens <ken@smilecdr.com> Co-authored-by: JasonRoberts-smile <85363818+JasonRoberts-smile@users.noreply.github.com> Co-authored-by: Qingyixia <106992634+Qingyixia@users.noreply.github.com> Co-authored-by: TipzCM <leif.stawnyczy@gmail.com> Co-authored-by: leif stawnyczy <leifstawnyczy@leifs-MacBook-Pro.local> Co-authored-by: Etienne Poirier <33007955+epeartree@users.noreply.github.com> Co-authored-by: peartree <etienne.poirier@smilecdr.com> Co-authored-by: kateryna-mironova <107507153+kateryna-mironova@users.noreply.github.com> Co-authored-by: longma1 <32119004+longma1@users.noreply.github.com> Co-authored-by: Long Ma <long@smilecdr.com> Co-authored-by: jdar8 <69840459+jdar8@users.noreply.github.com> Co-authored-by: markiantorno <markiantorno@gmail.com> Co-authored-by: Steven Li <steven@smilecdr.com> Co-authored-by: Luke deGruchy <luke.degruchy@smilecdr.com> Co-authored-by: karneet1212 <112980019+karneet1212@users.noreply.github.com> Co-authored-by: James Agnew <jamesagnew@gmail.com> Co-authored-by: James Agnew <james@jamess-mbp.lan> Co-authored-by: KGJ-software <39975592+KGJ-software@users.noreply.github.com> Co-authored-by: kylejule <kyle.jule@smilecdr.com> Co-authored-by: Nathan Doef <n.doef@protonmail.com> Co-authored-by: nathaniel.doef <nathaniel.doef@smilecdr.com> Co-authored-by: Jens Kristian Villadsen <jenskristianvilladsen@gmail.com> Co-authored-by: leif stawnyczy <leifstawnyczy@leifs-mbp.home>
2023-01-24 20:38:35 -05:00
<version>6.3.14-SNAPSHOT</version>
2016-01-28 11:36:59 -05:00
<relativePath>../pom.xml</relativePath>
</parent>
<artifactId>hapi-fhir-cli-app</artifactId>
<packaging>jar</packaging>
<name>HAPI FHIR - Command Line Client - Application</name>
<dependencies>
Squashed commit of the following: commit 2be11651c212ede9d50956ba9d4a802885e9dbed Author: James Agnew <jamesagnew@gmail.com> Date: Thu May 10 11:50:53 2018 -0400 Update changelog commit b3bb5f9052ecebce87588e2d5f5be983fbd0fd2e Author: James Agnew <jamesagnew@gmail.com> Date: Thu May 10 11:19:28 2018 -0400 Parameter updates commit f6b1082ba46f4d0d47d3e0094e904d527b0ebf75 Author: James Agnew <jamesagnew@gmail.com> Date: Thu May 10 07:24:30 2018 -0400 More test fixes commit 81a69c265f7347f6a23c73b827c79a8a4051b21b Author: James Agnew <jamesagnew@gmail.com> Date: Thu May 10 06:26:48 2018 -0400 Fix compile error commit 935938e92c697be1940b788a46c38ffd5ce84b84 Author: James Agnew <jamesagnew@gmail.com> Date: Thu May 10 06:25:18 2018 -0400 Another test fix commit 43568a1f8dd6325bebba2cd47ffb42bee7f12aa6 Author: James Agnew <jamesagnew@gmail.com> Date: Thu May 10 06:18:06 2018 -0400 Fix compile error commit e95894e643dda0a70ab5ab7be4363cae4ce5c4e6 Author: James Agnew <jamesagnew@gmail.com> Date: Thu May 10 06:13:50 2018 -0400 More work on tests commit 9393fb8f4f93e69f80293c0488cc16f74613f25c Author: James Agnew <jamesagnew@gmail.com> Date: Thu May 10 05:36:27 2018 -0400 One more fix commit 437f5051e4742eb500ec1eb1852e4c6105927c51 Author: James Agnew <jamesagnew@gmail.com> Date: Wed May 9 21:32:10 2018 -0400 Work on validator commit 20c51add4fbb5c33d7b5f8517fe9bf9a4f314292 Author: James Agnew <jamesagnew@gmail.com> Date: Wed May 9 19:34:10 2018 -0400 Validator fix commit 7bf2b0a0e93b71f6fbc46ab3b1dbd0fba6367959 Author: James Agnew <jamesagnew@gmail.com> Date: Wed May 9 18:44:04 2018 -0400 Fix test commit adc73e75c9b392ed964588f03970ab1afdb4cdef Author: James Agnew <jamesagnew@gmail.com> Date: Wed May 9 17:22:34 2018 -0400 Merge validator
2018-05-10 11:53:32 -04:00
<dependency>
<groupId>ca.uhn.hapi.fhir</groupId>
<artifactId>hapi-fhir-cli-api</artifactId>
<version>${project.version}</version>
<type>jar</type>
</dependency>
2016-01-28 11:36:59 -05:00
<dependency>
<groupId>ca.uhn.hapi.fhir</groupId>
<artifactId>hapi-fhir-cli-jpaserver</artifactId>
<version>${project.version}</version>
2016-01-28 11:36:59 -05:00
<type>war</type>
</dependency>
<dependency>
<groupId>ca.uhn.hapi.fhir</groupId>
<artifactId>hapi-fhir-cli-jpaserver</artifactId>
<version>${project.version}</version>
2016-01-28 11:36:59 -05:00
<type>jar</type>
<classifier>classes</classifier>
</dependency>
<dependency>
<groupId>ca.uhn.hapi.fhir</groupId>
<artifactId>hapi-fhir-testpage-overlay</artifactId>
<version>${project.version}</version>
2016-01-28 11:36:59 -05:00
<classifier>classes</classifier>
</dependency>
2018-11-29 08:36:59 -05:00
<!--
<dependency>
<groupId>com.oracle</groupId>
<artifactId>ojbc8g</artifactId>
<version>12.2.0.1</version>
</dependency>
-->
2016-01-28 11:36:59 -05:00
</dependencies>
<build>
<plugins>
<plugin>
<groupId>org.apache.maven.plugins</groupId>
<artifactId>maven-dependency-plugin</artifactId>
<executions>
<execution>
<id>copy</id>
<phase>process-resources</phase>
<goals>
<goal>copy</goal>
</goals>
<configuration>
<artifactItems>
<artifactItem>
<groupId>ca.uhn.hapi.fhir</groupId>
<artifactId>hapi-fhir-cli-jpaserver</artifactId>
<type>war</type>
<overWrite>true</overWrite>
<outputDirectory>target/classes</outputDirectory>
<destFileName>hapi-fhir-cli-jpaserver.war</destFileName>
</artifactItem>
</artifactItems>
<!-- other configurations here -->
</configuration>
</execution>
</executions>
</plugin>
<plugin>
<groupId>org.apache.maven.plugins</groupId>
<artifactId>maven-deploy-plugin</artifactId>
<configuration>
<skip>true</skip>
</configuration>
</plugin>
<plugin>
<groupId>org.apache.maven.plugins</groupId>
<artifactId>maven-shade-plugin</artifactId>
<executions>
<execution>
<phase>package</phase>
<goals>
<goal>shade</goal>
</goals>
<configuration>
<finalName>hapi-fhir-cli</finalName>
<artifactSet>
</artifactSet>
<transformers>
<transformer implementation="org.apache.maven.plugins.shade.resource.ManifestResourceTransformer">
<mainClass>ca.uhn.fhir.cli.App</mainClass>
</transformer>
</transformers>
<filters>
<filter>
<artifact>*</artifact>
<excludes>
<exclude>**/*.SF</exclude>
<exclude>**/*.RSA</exclude>
</excludes>
</filter>
</filters>
</configuration>
</execution>
</executions>
</plugin>
</plugins>
2016-01-28 11:36:59 -05:00
</build>
</project>