hapi-fhir/hapi-fhir-server-cds-hooks/pom.xml

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<?xml version="1.0" encoding="UTF-8"?>
<project xmlns="http://maven.apache.org/POM/4.0.0"
xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
xsi:schemaLocation="http://maven.apache.org/POM/4.0.0 http://maven.apache.org/xsd/maven-4.0.0.xsd">
<modelVersion>4.0.0</modelVersion>
<parent>
<groupId>ca.uhn.hapi.fhir</groupId>
<artifactId>hapi-deployable-pom</artifactId>
Core library bump 6.3.11 (#5772) * Bump to core 6.2.6 + fix compilation errors * Fix signature error * Error ordering * WIP 1 Fixing failing tests * Fix FhirInstanceValidatorR4Test * Fix FhirInstanceValidatorR5Test * Fix FhirInstanceValidatorR4BTest * Fix FhirInstanceValidatorDstu3Test.testValidateBuiltInProfiles() * WIP Fix FhirInstanceValidatorDstu3Test * Fix isPrimitiveType * Add placeholder narratives to ServerCapabilityStatement * Fix QuestionnaireResponseValidatorR4Test * Newline cleanup * Fix QuestionnaireResponseValidatorDstu3Test * Fix QuestionnaireResponseValidatorR5Test * Increase expected error messages by two because VALIDATION_HL7_WG_NEEDED New validation requirement as of 2023-09-16 * Add placeholder fix for Balp narrative * Fix expected validation messages * Fix more expected validation messages * Don't generate a master IPS narrative * Fix IPS generation tests expecting old composition narrative * Update fhir core and clinical-reasoning * Remove commented code * Bump to core 6.2.16-SNAPSHOT * Add missing methods * Add missing methods 2 * Fix error codes * Fix error code * Fix failing tests for Unsupported method 2488 * Fix error text * Fix another expected error message * Apply spotless * Fix error strings * Add minimal implementation to fix failing test * Fix error message * Fix some validation tests (r4) * Fix more R5 tests * Update for changing API * Fix some R4B test failures * Fix android incompatibility * Fix more tests * Switch back to LF * Fix more tests 2 * Fix R4 IPS generation use of relative references, switch to random UUID * Fix missing codes and patient ID in IPS test * Fix missing codes in IPS R4 Test 2 * Fix display value * Fix display value * Reorg wrapper issue collection; fixes errors with Balp and others * Update for API changes * Fix code set typo causing test failure * Fix DiffProviderR4Test * Fix RepositoryValidatingInterceptorHttpR4Test fails due to stricter code validation * More code fixes * Don't expect an extra error. * Use more specific logic for details tx code * Catch expected error * Clean up * Account for HAPI isEnabledValidationForCodingsLogicalAnd cases * Apply spotless * Change outputs for en_US single code test * Add missing system from code to pass validation * Account for DSTU3 and R4 including different code systems for race * Add expected loinc codes to test dao * Add some codesystem support for test * Bump core version * WIP pass on a list of CodeValidationIssue from CodeValidationResults * Re-use v2 and v3 data from r4 in r4b * CodeSystems can be supported, but not have a resource * Remove hack around unitsofmeasure + return false LookupCodeResult * Clean up chatter. * Update test cases, remove FIXME * Stop returning before adding all issues to ValidationResults * Update for changes in core API * Add severity to code issues + return to unknown system support * Use new CollectionUtils * Fix more issue messages and orders + null in TermReadSvcImpl * After checking valueSet, also check codeSystem * On second thought, always check the codesystem * Improve validation message * Refactor * Add error consistent with core validator results * Decrement query counts for validation * Improve code validation messages + don't miss invalid display on cs * Fix expected messages (added code details) * More expected message fixes * Remove redundant text from diagnostics + match core exception handling * Explicitly send tx passthrough messages no longer managed in core * Apply spotless * Add issue to code validation in TermReadSvcImpl * Adjust indexes of expected errors now that TermReadSvc is reporting * Bump to released core version * Code cleanup: commented code * More commented code cleanup * Fix parameter names * Use Set.of and List.of + fix duplicate values in set * Revert animal sniffed breakage, make field private * Add comments to describe disabled test * Remove System.out chatter * Fix javadoc generation for r5 structures module * More comments and move disabled annotation It was working when it left the shop. * Move older changelog into 7.4.0 and create core update changelog * Switch changelog type to change * Bump HAPI version * Add validation utils for FATAL issue severity * Handle FATAL codeValidationIssue severity * Fix test (validation throws more warnings) * Bump to version 7.3.4-SNAPSHOT * Bump to SNAPSHOT version of core + add necessary method implementations * Add comments to explain R4 terminology resources in R4B * Add test for Observation vital signs profile validation * Try using default validatorPolicyAdvisor * Return an empty set for fetchCanonicalResourceVersions * Profile now gives more explicit error instead of valueSet * Revert commit * Add CodeValidationIssues and additional error info * Do not return first successful match from codings. Check all. + adjust for extra errors. * apply spotless * Fix failing test, add comments re: invocations * Fix test to expect more informative error * Fix stray compilation errors from merge. * Fix merge overwrite of validation messages and indices * Fix merge overwrite of new validation results * Use core release 6.3.11 * Update HAPI version to 7.3.5-SNAPSHOT * Fix changelog * Remove commented code --------- Co-authored-by: James Agnew <jamesagnew@gmail.com> Co-authored-by: volodymyr <volodymyr.korzh@smilecdr.com>
2024-06-12 13:24:26 -04:00
<version>7.3.5-SNAPSHOT</version>
<relativePath>../hapi-deployable-pom/pom.xml</relativePath>
</parent>
<artifactId>hapi-fhir-server-cds-hooks</artifactId>
<packaging>bundle</packaging>
<name>HAPI FHIR - CDS Hooks</name>
<dependencies>
<dependency>
<groupId>ca.uhn.hapi.fhir</groupId>
<artifactId>hapi-fhir-base</artifactId>
<version>${project.version}</version>
</dependency>
<dependency>
<groupId>ca.uhn.hapi.fhir</groupId>
<artifactId>hapi-fhir-server</artifactId>
<version>${project.version}</version>
</dependency>
<dependency>
<groupId>ca.uhn.hapi.fhir</groupId>
<artifactId>hapi-fhir-storage</artifactId>
<version>${project.version}</version>
</dependency>
Implement CDS on FHIR in CDS Hooks (#5240) * WIP * WIP refactor * Initial commit * measureRefactor WIP * version bump * Bump to core release 6.0.22 (#5028) * Bump to core release 6.0.16 * Bump to core version 6.0.20 * Fix errors thrown as a result of VersionSpecificWorkerContextWrapper * Bump to core 6.0.22 * adding tests WIP * Rework MeasureServiceFActory * measure refactor WIP * Resolve 5126 hfj res ver prov might cause migration error on db that automatically indexes the primary key (#5127) * dropped old index FK_RESVERPROV_RES_PID on RES_PID column before adding IDX_RESVERPROV_RES_PID * added changelog * changed to valid version number * changed to valid version number, need to be ordered by version number... * generic provider loader * provider loader update * tests wip * 5123 - Use DEFAULT partition for server-based requests if none specified (#5124) 5123 - Use DEFAULT partition for server-based requests if none specified * consent remove all suppresses next link in bundle (#5119) * added FIXME with source of issue * added FIXME with root cause * added FIXME with root cause * Providing solution to the issue and removing fixmes. * Providing changelog * auto-formatting. * Adding new test. * Adding a new test for standard paging * let's try this and see if it works...? * fix tests * cleanup to trigger a new run * fixing tests --------- Co-authored-by: Ken Stevens <ken@smilecdr.com> Co-authored-by: peartree <etienne.poirier@smilecdr.com> * 5117 MDM Score for No Match Fields Should Not Be Included in Total Score (#5118) * fix, test, changelog * fix, test, changelog --------- Co-authored-by: justindar <justin.dar@smilecdr.com> * measureRefactor tests WIP * update tests wip * remove baseCrR4Test * update imports * add paging provider config to tests * dstu3 tests * _source search parameter needs to support modifiers (#5095) _source search parameter needs to support modifiers - added support form :contains, :missing, :above modifiers * latest work * cleanup * Refactor operation providers to support use in multiple modules * Fix HFQL docs (#5151) * repository measure refactor * undo bundle edit, add config * embedded library true * undo post of bundle * clear library cache on test * fix sumbit-data test * Fix tests * cleanup * Update MeasureService.java * latest * 3.0.0 engine update * merge cleanup * cr updates * cleanup * Only create services for PlanDefs that have a trigger with a named event * Fix parameters being sent through invoke * Handle system actions * cleanup * missing packages from cql * fix test data and test cases for repository api * latest * fix pom * fix test config * cleanup * 3.0.0 clinical reasoning uplift * r4 cql execution provider and tests * fix submitdata provider config * wip cql tests * debugging cql op wip * wip debugging cql * update tests for $cql, fix class names * prep for Pre6 uplift * spotless checks and test fixes * bump to 3.0.0-PRE6 * cleanup * fix version * cleanup * cleanup * fix exlusions in pom * add in cache invalidation config * fix resource resolution * cleanup * search converter bug and test for repository * update pom * update searchconverter * version bump, add changelog * remove term config, move IDaoRegistryUser class * Break out dstu3 providers and move config to version folders * merge cleanup * merge cleanup * Add changelog * spotless * fix error codes * cleanup * cleanup * Handle missing beans in Operation configs * spotless * Use CondtionalOnBean for CR Operation and Repository configs * Fix test config * Add RepositoryFactory and RestfulServer to CdsConfigService * Move createRequestDetails into CdsConfigService * spotless * review comments --------- Co-authored-by: justin.mckelvy <justin.mckelvy@smilecdr.com> Co-authored-by: tadgh <garygrantgraham@gmail.com> Co-authored-by: dotasek <david.otasek@smilecdr.com> Co-authored-by: Jonathan Percival <jonathan.i.percival@gmail.com> Co-authored-by: TynerGjs <132295567+TynerGjs@users.noreply.github.com> Co-authored-by: Steve Corbett <137920358+steve-corbett-smilecdr@users.noreply.github.com> Co-authored-by: Ken Stevens <khstevens@gmail.com> Co-authored-by: Ken Stevens <ken@smilecdr.com> Co-authored-by: peartree <etienne.poirier@smilecdr.com> Co-authored-by: jdar8 <69840459+jdar8@users.noreply.github.com> Co-authored-by: justindar <justin.dar@smilecdr.com> Co-authored-by: volodymyr-korzh <132366313+volodymyr-korzh@users.noreply.github.com> Co-authored-by: Nathan Doef <n.doef@protonmail.com> Co-authored-by: Justin McKelvy <60718638+Capt-Mac@users.noreply.github.com>
2023-09-27 13:34:57 -04:00
<dependency>
<groupId>ca.uhn.hapi.fhir</groupId>
<artifactId>hapi-fhir-storage-cr</artifactId>
<version>${project.version}</version>
</dependency>
<dependency>
<groupId>org.springframework</groupId>
<artifactId>spring-beans</artifactId>
<version>${spring_version}</version>
</dependency>
<dependency>
<groupId>org.springframework</groupId>
<artifactId>spring-context</artifactId>
<version>${spring_version}</version>
</dependency>
<dependency>
<groupId>org.springframework</groupId>
<artifactId>spring-web</artifactId>
<version>${spring_version}</version>
</dependency>
<!-- test -->
<dependency>
<groupId>ch.qos.logback</groupId>
<artifactId>logback-classic</artifactId>
<scope>test</scope>
</dependency>
<dependency>
<groupId>org.springframework</groupId>
<artifactId>spring-test</artifactId>
<scope>test</scope>
</dependency>
<dependency>
<groupId>ca.uhn.hapi.fhir</groupId>
<artifactId>hapi-fhir-jpaserver-test-utilities</artifactId>
<version>${project.version}</version>
<scope>test</scope>
</dependency>
<dependency>
<groupId>org.reflections</groupId>
<artifactId>reflections</artifactId>
<version>${reflections_version}</version>
<scope>test</scope>
</dependency>
<dependency>
<groupId>org.simplejavamail</groupId>
<artifactId>simple-java-mail</artifactId>
<!-- Excluded in favor of jakarta.activation:jakarta.activation-api -->
<exclusions>
<exclusion>
<groupId>com.sun.activation</groupId>
<artifactId>jakarta.activation</artifactId>
</exclusion>
</exclusions>
</dependency>
<dependency>
<groupId>com.icegreen</groupId>
<artifactId>greenmail</artifactId>
<scope>compile</scope>
<!-- Excluded in favor of jakarta.activation:jakarta.activation-api -->
<exclusions>
<exclusion>
<groupId>com.sun.activation</groupId>
<artifactId>jakarta.activation</artifactId>
</exclusion>
</exclusions>
</dependency>
</dependencies>
<build>
<pluginManagement>
<plugins>
<plugin>
<groupId>org.apache.maven.plugins</groupId>
<artifactId>maven-site-plugin</artifactId>
<configuration>
<skipDeploy>true</skipDeploy>
</configuration>
</plugin>
</plugins>
</pluginManagement>
<plugins>
<plugin>
<groupId>org.apache.felix</groupId>
<artifactId>maven-bundle-plugin</artifactId>
<extensions>true</extensions>
<configuration>
<instructions>
<_nouses>true</_nouses>
<_removeheaders>Built-By, Include-Resource, Private-Package, Require-Capability</_removeheaders>
</instructions>
</configuration>
</plugin>
</plugins>
</build>
</project>