hapi-fhir/hapi-fhir-cli/hapi-fhir-cli-app/pom.xml

<project xmlns="http://maven.apache.org/POM/4.0.0" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:schemaLocation="http://maven.apache.org/POM/4.0.0 http://maven.apache.org/xsd/maven-4.0.0.xsd">
	<modelVersion>4.0.0</modelVersion>

	<!-- Note: HAPI projects use the "hapi-fhir" POM as their base to provide easy management. You do not need to use this in your own projects, so the "parent" tag 
		and it's contents below may be removed if you are using this file as a basis for your own project. -->
	<parent>
		<groupId>ca.uhn.hapi.fhir</groupId>
		<artifactId>hapi-fhir-cli</artifactId>
		<version>3.5.0-SNAPSHOT</version>
		<relativePath>../pom.xml</relativePath>
	</parent>

	<artifactId>hapi-fhir-cli-app</artifactId>
	<packaging>jar</packaging>

	<name>HAPI FHIR - Command Line Client - Application</name>

	<dependencies>

		<dependency>
			<groupId>ca.uhn.hapi.fhir</groupId>
			<artifactId>hapi-fhir-cli-api</artifactId>
			<version>${project.version}</version>
			<type>jar</type>
		</dependency>
		<dependency>
			<groupId>ca.uhn.hapi.fhir</groupId>
			<artifactId>hapi-fhir-cli-jpaserver</artifactId>
			<version>${project.version}</version>
			<type>war</type>
		</dependency>
		<dependency>
			<groupId>ca.uhn.hapi.fhir</groupId>
			<artifactId>hapi-fhir-cli-jpaserver</artifactId>
			<version>${project.version}</version>
			<type>jar</type>
			<classifier>classes</classifier>
		</dependency>
		<dependency>
			<groupId>ca.uhn.hapi.fhir</groupId>
			<artifactId>hapi-fhir-testpage-overlay</artifactId>
			<version>${project.version}</version>
			<classifier>classes</classifier>
		</dependency>

	</dependencies>

	<build>
		<plugins>
			<plugin>
				<groupId>org.apache.maven.plugins</groupId>
				<artifactId>maven-dependency-plugin</artifactId>
				<executions>
					<execution>
						<id>copy</id>
						<phase>process-resources</phase>
						<goals>
							<goal>copy</goal>
						</goals>
						<configuration>
							<artifactItems>
								<artifactItem>
									<groupId>ca.uhn.hapi.fhir</groupId>
									<artifactId>hapi-fhir-cli-jpaserver</artifactId>
									<type>war</type>
									<overWrite>true</overWrite>
									<outputDirectory>target/classes</outputDirectory>
									<destFileName>hapi-fhir-cli-jpaserver.war</destFileName>
								</artifactItem>
							</artifactItems>
							<!-- other configurations here -->
						</configuration>
					</execution>
				</executions>
			</plugin>
			<plugin>
				<groupId>org.apache.maven.plugins</groupId>
				<artifactId>maven-deploy-plugin</artifactId>
				<configuration>
					<skip>true</skip>
				</configuration>
			</plugin>
			<plugin>
				<groupId>org.apache.maven.plugins</groupId>
				<artifactId>maven-shade-plugin</artifactId>
				<executions>
					<execution>
						<phase>package</phase>
						<goals>
							<goal>shade</goal>
						</goals>
						<configuration>
							<finalName>hapi-fhir-cli</finalName>
							<artifactSet>
							</artifactSet>
							<transformers>
								<transformer implementation="org.apache.maven.plugins.shade.resource.ManifestResourceTransformer">
									<mainClass>ca.uhn.fhir.cli.App</mainClass>
								</transformer>
							</transformers>
							<filters>
								<filter>
									<artifact>*</artifact>
									<excludes>
										<exclude>**/*.SF</exclude>
										<exclude>**/*.RSA</exclude>
									</excludes>
								</filter>
							</filters>
						</configuration>
					</execution>
				</executions>
			</plugin>
		</plugins>
	</build>

</project>