Diederik Muylwyk
16963881b0
Reset pre-expansion schedule.
2019-08-30 19:36:34 -04:00
Diederik Muylwyk
548647defe
Toggle pre-expansion config.
2019-08-30 19:31:45 -04:00
Diederik Muylwyk
f29abd7167
Fixed ResourceTable lookups for pre-expansion and code validation.
2019-08-30 19:31:05 -04:00
Diederik Muylwyk
9f7cf3923b
Merge pull request #1458 from jamesagnew/1457-valueset-pre-expansion-need-to-account-for-existing-valuesets-and-user-assigned-ids
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Resolve "ValueSet pre-expansion - need to account for existing ValueSets and user-assigned IDs."
2019-08-30 10:48:39 -04:00
Diederik Muylwyk
8ef9c61b83
Address review comments; improve logging.
2019-08-30 10:47:21 -04:00
James Agnew
8700088c67
Missed a keyword
2019-08-29 22:06:43 -04:00
James Agnew
668af76514
Make method static again
2019-08-29 22:03:58 -04:00
James Agnew
347aada62e
Add a setter for unit tests
2019-08-29 21:43:29 -04:00
James Agnew
dbe86c8669
One more test fix
2019-08-29 21:35:07 -04:00
James Agnew
1b1d80b850
Test fix
2019-08-29 21:02:19 -04:00
Diederik Muylwyk
e03d6a5d47
Fixed handling of pre-expansion in light of pre-existing, non-pre-expanded ValueSets.
2019-08-29 18:09:30 -04:00
James Agnew
f59bdc4afe
Reuse FHIRPath across JPA requests
2019-08-29 14:13:31 -04:00
James Agnew
c5a88444b6
Merge branch 'master' of github.com:jamesagnew/hapi-fhir
2019-08-29 14:00:37 -04:00
James Agnew
956bb39327
Resolve an inefficient regex expression
2019-08-29 13:59:31 -04:00
Diederik Muylwyk
c22bf8b09f
Fixed handling of client-assigned IDs throughout terminology services.
2019-08-29 10:48:54 -04:00
Diederik Muylwyk
e67a750c4f
validate-code operation now works with client-assigned IDs; added a bunch of failing tests to work on tomorrow.
2019-08-28 18:49:18 -04:00
Diederik Muylwyk
5650bc9baa
Merge pull request #1455 from jamesagnew/1431-validate-code-operation-needs-to-be-optimized-for-large-valuesets
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Resolve "$validate-code operation needs to be optimized for large ValueSets."
2019-08-27 21:26:05 -04:00
Diederik Muylwyk
9ef0519b4c
validate-code operation has been optimized for large ValueSets; submitting pull request.
2019-08-27 21:15:12 -04:00
Diederik Muylwyk
6b0084fc3b
Merge pull request #1448 from jamesagnew/1447-loinc-filenames-should-be-configurable
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Resolve "LOINC filenames should be configurable."
2019-08-27 13:47:40 -04:00
Diederik Muylwyk
94c7fc49fd
Making LOINC filenames configurable; fix implicit ValueSet URL for loinc-all.
2019-08-27 13:46:42 -04:00
Diederik Muylwyk
1adfda44d9
Making LOINC filenames configurable; ready for review.
2019-08-27 11:19:01 -04:00
James Agnew
70d0a8aa8f
Get patch working ( #1449 )
2019-08-27 05:42:15 -04:00
Diederik Muylwyk
f4789247b2
Making LOINC filenames configurable; fix IEEE medical device code property key.
2019-08-26 18:46:57 -04:00
Diederik Muylwyk
0765254024
Making LOINC filenames configurable; initial commit.
2019-08-26 18:32:21 -04:00
Diederik Muylwyk
e5c8ffdc20
Merge pull request #1446 from jamesagnew/1445-an-implicit-all-loinc-valueset-needs-to-be-created-when-uploading-the-loinc-codesystem
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Resolve "An implicit all-loinc ValueSet needs to be created when uploading the LOINC CodeSystem."
2019-08-26 16:48:07 -04:00
Diederik Muylwyk
0ee15874ca
loinc-all ValueSet is now created automatically when loading LOINC terminology.
2019-08-26 16:42:37 -04:00
Diederik Muylwyk
a93d4e9bcd
Merge pull request #1444 from jamesagnew/1443-multiaxial-properties-need-to-be-supported-for-code-lookups
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Resolve "Multiaxial properties need to be supported for code lookups."
2019-08-26 14:48:59 -04:00
Diederik Muylwyk
b01d59d5a0
Added changelog entry.
2019-08-26 14:47:50 -04:00
Diederik Muylwyk
073d2a45a4
Multiaxial hierarchy support is implemented; we not populated parent and child properties.
2019-08-26 14:26:38 -04:00
Diederik Muylwyk
5071c62cb9
Merge pull request #1432 from jamesagnew/1366-expand-operation-needs-to-be-optimized-for-large-valuesets-4
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Resolve "1366 expand operation needs to be optimized for large valuesets 4"
2019-08-26 09:55:05 -04:00
Diederik Muylwyk
3f14a7a68b
Added changelog entry for switch from Derby to H2 for HAPI FHIR CLI server.
2019-08-26 09:54:05 -04:00
Diederik Muylwyk
b41926307c
Completed work on large ValueSet expansion support; ready for review.
2019-08-23 17:40:45 -04:00
James Agnew
10958a8e4d
I think this might work now..
2019-08-23 12:22:27 -04:00
Diederik Muylwyk
890555a77d
Incremental work on large ValueSet expansion support; transaction boundaries need to be broken up.
2019-08-23 11:46:32 -04:00
Diederik Muylwyk
97a235ddfc
Merging master into working branch.
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# Conflicts:
# hapi-fhir-jpaserver-base/src/main/java/ca/uhn/fhir/jpa/dao/DaoConfig.java
2019-08-22 14:02:56 -04:00
Diederik Muylwyk
72dd6b2922
Incremental work on large ValueSet expansion support; fixed broken deletion for TermValueSetConceptDesignation.
2019-08-22 14:00:08 -04:00
Ken Stevens
7d008b2ee0
Merge pull request #1434 from jamesagnew/ks-awaitility-version-bump
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awaitility version bump
2019-08-21 15:58:42 -04:00
Ken Stevens
37c1ba44fe
Merge remote-tracking branch 'remotes/origin/master' into ks-awaitility-version-bump
2019-08-21 15:04:16 -04:00
James Agnew
9428430822
Add support for Resource.meta.source ( #1438 )
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* Work on indexing source
* Work on tests
* Refactor query count tests
* Unit test fixes
* Add some tests
* DAO fix
* Fix compile error
* Unit test fix
* Cleanup
* Test fix
* Fix compile error
* One more test fix
2019-08-21 11:17:43 -04:00
Diederik Muylwyk
3218bd7853
Incremental work on large ValueSet expansion support; implemented paging when reading concepts from the terminology tables. Switched from Derby to H2.
2019-08-20 18:11:53 -04:00
Ken Stevens
5703b55e88
Merge remote-tracking branch 'remotes/origin/master' into ks-awaitility-version-bump
2019-08-20 15:08:25 -04:00
Ken Stevens
df7469731b
turn of sql queries
2019-08-20 15:02:02 -04:00
James Agnew
ce44115152
Handle cascading deletes correctly with circular references ( #1435 )
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* Handle cascading deletes correctly with circular references
* A bit of cleanup
* Address review comments
* FIx some javadocs
* Fix an incorrect message
2019-08-20 10:08:34 -04:00
Ken Stevens
5016ab1ec2
Merge remote-tracking branch 'remotes/origin/master' into ks-awaitility-version-bump
2019-08-20 09:16:30 -04:00
Ken Stevens
daf45db2be
fixed a test and removed awaitility excludes
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mvn install completed successfully
2019-08-20 09:14:21 -04:00
James Agnew
84836aed84
Fix accidental typo
2019-08-20 08:39:46 -04:00
James Agnew
ce879b3863
Fix versioned API incompatibility with GraphQL
2019-08-20 08:35:27 -04:00
Ken Stevens
105d857819
Merge remote-tracking branch 'remotes/origin/master' into ks-awaitility-version-bump
2019-08-19 22:34:58 -04:00
Ken Stevens
97e14711a2
add missing dep
2019-08-19 22:31:52 -04:00
Ken Stevens
a43f4ba967
should be test scope only
2019-08-19 22:28:33 -04:00