Diederik Muylwyk
33b4f7537f
Resolve "1366 expand operation needs to be optimized for large valuesets 3" ( #1403 )
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* Added TRM_VALUESET.EXPANSION_STATUS column, index, fields to entity, and migration tasks.
* Incremental work on large ValueSet expansion support; still need to fix asynchronous tests and actually use the terminology tables when expanding.
* Incremental work on large ValueSet expansion support; still need to actually use the terminology tables when expanding.
2019-08-01 13:57:25 -04:00
Diederik Muylwyk
d67de13708
Syncing master into working branch.
2019-08-01 13:51:26 -04:00
Diederik Muylwyk
78842164fd
Addressing review comments.
2019-08-01 13:37:46 -04:00
jamesagnew
46c8c61932
Restore build - May need to roll back the RDF changes
2019-08-01 10:14:56 -04:00
jamesagnew
39c2a95ce7
Credit for #1321
2019-08-01 09:29:43 -04:00
James Agnew
d3ef577418
Merge pull request #1321 from uurl/rdf_parser
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RDF parser
2019-08-01 09:26:04 -04:00
James Agnew
0f4738c1b5
Merge branch 'master' into rdf_parser
2019-08-01 09:25:40 -04:00
jamesagnew
e20443010d
Credit for #1404
2019-08-01 06:38:37 -04:00
Seth Rylan Gainey
c0c5714d36
Fix for https://github.com/jamesagnew/hapi-fhir/issues/1402 . Add
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historyForInstance and historyForType to AbstractJaxRsResourceProvider with
non-ambiguous @Path values.
2019-08-01 06:34:59 -04:00
Ken Stevens
f1d3fc2307
Changed Stopwatch getThroughput param from int to long
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Added FhirVersion accessor to AnyListResource
2019-08-01 06:32:09 -04:00
Diederik Muylwyk
ffda92514a
Incremental work on large ValueSet expansion support; still need to actually use the terminology tables when expanding.
2019-07-31 16:33:50 -04:00
Diederik Muylwyk
0e2dcce841
Incremental work on large ValueSet expansion support; still need to fix asynchronous tests and actually use the terminology tables when expanding.
2019-07-31 15:52:25 -04:00
James Agnew
3196bc370f
Add a default implementation to new terminology service loader method
2019-07-31 10:07:51 -04:00
James Agnew
b956b7552e
Merge branch 'master' of github.com:jamesagnew/hapi-fhir
2019-07-30 17:52:47 -04:00
James Agnew
04ce9cfc1a
Add support for uploading custom terminology using the
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$upload-external-code-system operation
2019-07-30 17:30:18 -04:00
Diederik Muylwyk
d1cba9f928
Syncing master into working branch.
2019-07-29 19:39:29 -04:00
jamesagnew
cf5201c67b
Add a constructor
2019-07-29 19:31:47 -04:00
Diederik Muylwyk
a8489f4331
Added TRM_VALUESET.EXPANSION_STATUS column, index, fields to entity, and migration tasks.
2019-07-29 19:30:46 -04:00
jamesagnew
a3cbdf0956
Make terminologyuploaderprovider not abstract
2019-07-29 19:02:51 -04:00
James Agnew
b030d1af31
Test fixes
2019-07-29 18:17:40 -04:00
James Agnew
a4ca5374ec
Add terminology delta operations ( #1401 )
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* Start work on delta operations
* Add changelog
* Some build fixes
* Move upload terminology command to CodeSystem resource
* Updates
* Some test fixes
* Add changelog
* Some test fixes
* More test fixes
* Test fix
* Add additional tests
* Transaction boundary fixes
2019-07-29 17:46:42 -04:00
jamesagnew
8158292665
Allow operations to better work across multiple versions of FHIR
2019-07-26 05:46:37 -04:00
Diederik Muylwyk
d03fc0f61d
Add null check for shortName before adding designation. ( #1396 )
2019-07-25 11:06:02 -04:00
James Agnew
3460069d38
Merge pull request #1393 from jamesagnew/expunge-resource-hook
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Expunge resource hook
2019-07-25 05:41:39 -04:00
Ken Stevens
a7817b07ca
Pre PR cleanup
2019-07-24 22:00:34 -04:00
Ken Stevens
a20b738161
Pre PR cleanup
2019-07-24 22:00:26 -04:00
Ken Stevens
84f5c7d467
Merge remote-tracking branch 'remotes/origin/master' into expunge-resource-hook
2019-07-24 21:54:05 -04:00
Ken Stevens
e05387da02
Recover from failed merge again. This time with feeling!
2019-07-24 13:46:20 -04:00
James Agnew
ddb8e385bf
Test fix
2019-07-24 13:24:48 -04:00
James Agnew
bff951338c
Merge branch 'master' of github.com:jamesagnew/hapi-fhir
2019-07-24 13:19:56 -04:00
James Agnew
b78cd1e62e
Merge branch 'add-pid-to-created-resource'
2019-07-24 13:19:38 -04:00
James Agnew
e8cf2738f0
Handle oversized payload request
2019-07-24 13:18:30 -04:00
James Agnew
b9dbd69e5d
Fix limiting on size
2019-07-24 13:11:05 -04:00
Ken Stevens
64e83fa3df
Revert "Recovering Pointcut from a failed merge"
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This reverts commit 19c0b4fd
2019-07-24 13:00:49 -04:00
Ken Stevens
19c0b4fdd2
Recovering Pointcut from a failed merge
2019-07-24 11:30:36 -04:00
Ken Stevens
0efe69f891
Merge remote-tracking branch 'remotes/origin/master' into expunge-resource-hook
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# Conflicts:
# hapi-fhir-jpaserver-base/src/main/java/ca/uhn/fhir/jpa/dao/expunge/ResourceExpungeService.java
2019-07-24 10:41:37 -04:00
Ken Stevens
37411a6ae2
Merge remote-tracking branch 'remotes/origin/master' into expunge-resource-hook
2019-07-24 10:41:11 -04:00
jamesagnew
6b599c29e5
Merge branch 'add-pid-to-created-resource'
2019-07-23 17:36:15 -04:00
James Agnew
bff39e4139
Try to deal with an intermittent failure
2019-07-23 15:58:14 -04:00
James Agnew
9094323c43
Add a test
2019-07-23 14:47:27 -04:00
James Agnew
b1e409519d
Add a test
2019-07-23 14:47:27 -04:00
Ken Stevens
980f058b3f
Merge remote-tracking branch 'remotes/origin/master' into add-pid-to-created-resource
2019-07-23 09:13:53 -04:00
Ken Stevens
8d86e34bcf
Merge remote-tracking branch 'remotes/origin/master' into expunge-resource-hook
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# Conflicts:
# hapi-fhir-jpaserver-base/src/main/java/ca/uhn/fhir/jpa/dao/expunge/ResourceExpungeService.java
2019-07-23 09:12:08 -04:00
jamesagnew
60ea922e8d
Add license headers
2019-07-23 05:38:10 -04:00
James Agnew
7e3d062d15
Switch default client to JSON ( #1392 )
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* Start work on changing over
* Update tests
* More test fixes
* Work on generalizing binary access provider a bit
* Add expunge capability to binary storage, and also support actual binary
resources
* Work on binary provider
* Get the DB bound binary storage service working
* Test fixes
* Compile fix
* Fix compile error
* Test fix
* Test tweak
* Trying to figure out an intermittent failure
* Work on tests
* More work on tests
* Another test fix
2019-07-22 21:27:10 -04:00
Ken Stevens
a68addf89a
Merge remote-tracking branch 'remotes/origin/master' into add-pid-to-created-resource
2019-07-22 17:02:41 -04:00
Ken Stevens
3582fe4c8a
Merge remote-tracking branch 'remotes/origin/master' into expunge-resource-hook
2019-07-19 13:52:08 -04:00
James Agnew
03918fe29a
Add some javadoc
2019-07-19 13:42:01 -04:00
James Agnew
d304a8fb6c
Add a safety check to rename column task
2019-07-19 12:13:35 -04:00
James Agnew
4665ea82b3
Documentation tweak
2019-07-19 10:57:20 -04:00