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8365 Commits

Author SHA1 Message Date
Tadgh 3ec47cb0ba Bump version as we break the localcontainerentitymanagerfactory bean constructors args 2021-09-07 13:58:22 -04:00
Tadgh 6a2a5d5097 Merge branch 'master' into custom-elastic-index 2021-09-07 13:56:56 -04:00
Tadgh eabe3e7c74 Merge branch 'master' into custom-elastic-index 2021-09-07 13:56:44 -04:00
Tadgh ecd93c9e8a Add changelog 2021-09-07 13:54:28 -04:00
Tadgh 16752f393c Finalize implementation 2021-09-07 13:33:03 -04:00
Tadgh 3e5c2f8bf1
Merge pull request #2957 from ivido/npe_fix 
Fixed NPE in PidToIBaseResourceProcessor
 2021-09-07 12:43:36 -04:00
Jari Maijenburg d3d7c6e97e
Merge branch 'master' into npe_fix 2021-09-07 17:36:05 +02:00
Tadgh ca2a1ff9df Add HsTest replicating boot failure 2021-09-07 10:08:17 -04:00
Tadgh ad5d56172a Return 2 unused beans 2021-09-07 09:11:48 -04:00
Tadgh 41e8dd93f0
Merge pull request #2960 from hapifhir/ks-20210906-code-cleanup 
extract some methods for readability
 2021-09-06 15:00:32 -04:00
Ken Stevens a1733ed3eb cleanup 2021-09-06 13:55:19 -04:00
Ken Stevens 4281648a33 extract some methods for readability 2021-09-06 13:52:10 -04:00
Ken Stevens ea153334fb extract some methods for readability 2021-09-06 13:50:09 -04:00
Tadgh 710fb3bd89 wip 2021-09-05 00:04:13 -04:00
Tadgh f0a8659653 Fix template and setup static prefix as sample 2021-09-04 23:55:03 -04:00
Jari Maijenburg cdb7ffb0d3 Fixed NPE in PidToIBaseResourceProcessor 2021-09-04 01:44:07 +02:00
Ken Stevens 346e29920a
Issue 2927 convert mdm clear to spring batch (#2929) 
* initial roughout of mdm clear batch job

* still roughing out classes

* finished first draft of reader

* most tests passing now

* all tests pass.  now FIXMEs

* FIXMEs done.  Time for regression.

* fix test

* changelog and docs

* fix test

* pre-review cleanup

* version bump

* move spring autowire deps for cdr

* move spring autowire deps for cdr

* finally got beans working phew

* rearrange method calls so persistence module can perform clear operation on its own

* Update hapi-fhir-docs/src/main/resources/ca/uhn/hapi/fhir/docs/server_jpa_mdm/mdm_operations.md

Co-authored-by: Tadgh <tadgh@cs.toronto.edu>

* review feedback

* review feedback

* Remove inheritance

* fix beans

Co-authored-by: Tadgh <tadgh@cs.toronto.edu>
Co-authored-by: Tadgh <garygrantgraham@gmail.com>
 2021-09-03 14:58:19 -04:00
Tadgh 28cc51393b
Merge pull request #2953 from hapifhir/2952 
update TestUtil to test Embeddable classes, not just Entity classes
 2021-09-03 11:49:37 -04:00
Vadim Karantayer b29a61df40 update TestUtil to test Embeddable classes, not just Entity classes 2021-09-03 10:40:54 -04:00
Kevin Dougan SmileCDR fed755523f
Resolve - Avoid JOINs on HFJ_RESOURCE Checking RES_TYPE and RES_DELETED_AT Columns (#2944) 
* Added the start of a new Unit Test.

* Renamed the Unit Test.

* Fleshed out the Unit Test with additional Resource properties.

* Tweaked the Unit Test more but it is still not working as desired so more changes will be needed to replicate the specific scenario...

* More Unit Test tweaks...

* More Unit Test tweaks.

* More tweaks...

* Reproduced the problem.

* Finally, a Failing Unit Test that exposes the problem.

* Fixed the Unit Test by changing how SearchBuilder manipulates underscore params.

* Added another test scenario.

* Added a third search test.

* Removed the third search example since it was not effective.

* Test fix

Co-authored-by: jamesagnew <jamesagnew@gmail.com>
 2021-09-03 05:28:04 -04:00
Tadgh 4d1de25a36
Merge pull request #2950 from hapifhir/ft-search-with-not-modifier 
Fixed :not modifier issue for the resourceLink
 2021-09-03 01:17:11 -04:00
Tadgh 2ed7019a6c Add another test 2021-09-03 00:08:12 -04:00
Tadgh e3e7edd320 Merge branch 'ft-search-with-not-modifier' of github.com:hapifhir/hapi-fhir into ft-search-with-not-modifier 2021-09-02 23:07:14 -04:00
Tadgh dc69bfc729 Add changelog 2021-09-02 23:07:07 -04:00
Frank Tao 8651990cac Fixed class cast issue 2021-09-02 23:04:30 -04:00
Frank Tao 56890dba93 Reformatted the code 2021-09-02 22:26:55 -04:00
Frank Tao be96adb694 Merge branch 'poc-chained-not-bug' into ft-search-with-not-modifier 
# Conflicts:
#	hapi-fhir-jpaserver-base/src/main/java/ca/uhn/fhir/jpa/search/builder/QueryStack.java
#	hapi-fhir-jpaserver-base/src/test/java/ca/uhn/fhir/jpa/provider/r4/ResourceProviderSearchModifierR4Test.java
 2021-09-02 22:07:22 -04:00
Frank Tao b81a61e465 Fixed :not modifier issue for the resource 2021-09-02 21:52:37 -04:00
Tadgh a2861c695e
Merge pull request #2949 from hapifhir/2948 
update TestUtil to recursively scan down into subpackages
 2021-09-02 18:34:23 -04:00
VK-SMILECDR 39f18e1897
Merge branch 'master' into 2948 2021-09-02 17:24:15 -04:00
Tadgh 72db544bc3
Merge pull request #2946 from hapifhir/revert-2928-ft-search-with-not-modifier 
Revert "Fix search of :not modifier"
 2021-09-02 15:46:44 -04:00
Vadim Karantayer c28f5e75b3 update TestUtil to recursively scan down into subpackages 2021-09-02 15:35:40 -04:00
Tadgh 26ff15f939
Revert "Fix search of :not modifier" 2021-09-02 14:33:30 -04:00
Tadgh 6c700f9432 Add POC for failure 2021-09-02 13:33:27 -04:00
Tadgh aca354bd8d
Merge pull request #2941 from sidharthramesh/patch-2 
Corrected typo in docs - Plain Providers
 2021-09-02 09:48:55 -04:00
Tadgh feb34e9bf5
Merge branch 'master' into patch-2 2021-09-02 08:42:41 -04:00
Tadgh b1d192637d
Merge pull request #2928 from hapifhir/ft-search-with-not-modifier 
Fix search of :not modifier
 2021-09-02 08:41:16 -04:00
Sidharth Ramesh f5de2da6ba
Corrected typo in docs - Plain Providers 
It was "plan providers" before
 2021-09-02 14:52:38 +05:30
Tadgh 1868dc2c19
Merge pull request #2940 from hapifhir/rel_5_5_1 
Rel 5 5 1
 2021-09-01 19:22:10 -04:00
Tadgh 3e288f1dde Merge branch 'master' into rel_5_5_1 2021-09-01 18:16:27 -04:00
Tadgh b4a6c3ed2a
Merge pull request #2939 from hapifhir/add-attribution-for-gotoguy 
Add attribution for 2793
 2021-09-01 16:42:30 -04:00
Tadgh ee956929f9
Merge branch 'master' into add-attribution-for-gotoguy 2021-09-01 16:42:19 -04:00
Tadgh 7e80461e77
Merge pull request #2930 from theGOTOguy/memorycacheservicefix 
Clear the memory cache whenever ExpungeEverythingService is used.
 2021-09-01 16:26:53 -04:00
Tadgh ae2c752c55 Add attribution for 2793 2021-09-01 15:54:28 -04:00
Ben Li-Sauerwine 6e389d6f59 Merge branch 'memorycacheservicefix' of https://github.com/theGOTOguy/hapi-fhir into memorycacheservicefix 2021-09-01 15:05:32 -04:00
Ben Li-Sauerwine 0724e652bb Refactor to prevent adding additional signatures to expungeEverythingByType. 2021-09-01 15:04:31 -04:00
Ben Li-Sauerwine 3789bc0f75
Merge branch 'master' into memorycacheservicefix 2021-09-01 13:55:03 -04:00
Tadgh 326590fb12
Merge pull request #2936 from hapifhir/2935_Search_with_trailing_percent_sign 
[2935] Escape "%" in like expression
 2021-09-01 12:51:24 -04:00
katie_smilecdr 453ef7ec1c Merge branch 'master' into 2935_Search_with_trailing_percent_sign 2021-09-01 11:33:26 -04:00
Ben Li-Sauerwine 7001272e4b Clear out the memory cache whenever we call the ExpungeEverythingService. 2021-09-01 01:26:47 -04:00