46c00f4efb
Update for Loinc 2.68 ( #1917 )
...
* Work on loinc updates
* Work on loinc upload
* Clean up CLI config
* Add changelog
* Update hapi-fhir-jpaserver-base/src/main/java/ca/uhn/fhir/jpa/term/TermLoaderSvcImpl.java
Co-authored-by: IanMMarshall <49525404+IanMMarshall@users.noreply.github.com>
* Update hapi-fhir-jpaserver-base/src/main/java/ca/uhn/fhir/jpa/term/TermLoaderSvcImpl.java
Co-authored-by: IanMMarshall <49525404+IanMMarshall@users.noreply.github.com>
* Update hapi-fhir-jpaserver-base/src/test/java/ca/uhn/fhir/jpa/provider/r4/TerminologyUploaderProviderR4Test.java
Co-authored-by: IanMMarshall <49525404+IanMMarshall@users.noreply.github.com>
* Update hapi-fhir-jpaserver-base/src/main/java/ca/uhn/fhir/jpa/term/loinc/LoincUploadPropertiesEnum.java
Co-authored-by: IanMMarshall <49525404+IanMMarshall@users.noreply.github.com>
* Update hapi-fhir-jpaserver-base/src/test/java/ca/uhn/fhir/jpa/term/TerminologyLoaderSvcLoincTest.java
Co-authored-by: IanMMarshall <49525404+IanMMarshall@users.noreply.github.com>
* Clean up imports
* LOINC fixes
* Loinc loader fixes
Co-authored-by: IanMMarshall <49525404+IanMMarshall@users.noreply.github.com>
2020-06-18 16:55:11 -04:00
b8da4f0140
Add package support ( #1911 )
...
* Begin rework of package management
* Work on NPM
* Work on package management
* Work on NPM
* NPM rework
* Work on NPM
* NPM package rework
* Updates
* Updates
* Add license
* Work on package server
* Work on package importing
* Work on package management
* Package rework
* Work on packages
* Work on package manager
* Work on pkgs
* NPM work
* NPM rework
* Work on package cache
* Work on NPM
* Work on NPM
* Package fixes
* Add tests
* Tweaks
* Test fixes
* Add changelog
* Avoid snapshot dep
2020-06-10 05:30:20 -04:00
35b75f8ffb
Merge remote-tracking branch 'remotes/origin/master' into im_20200316_lastn_operation_elasticsearch
2020-05-23 15:54:23 -04:00
e780a8402e
Use R5 snapshot generator ( #1862 )
...
* Use R5 snapshot generator
* Snapshot generator reworking
2020-05-23 12:54:19 -04:00
4d378ee0ed
Merge remote-tracking branch 'remotes/origin/master' into im_20200316_lastn_operation_elasticsearch
...
# Conflicts:
# hapi-fhir-cli/hapi-fhir-cli-jpaserver/src/main/java/ca/uhn/fhir/jpa/demo/CommonConfig.java
# hapi-fhir-jpaserver-base/pom.xml
# hapi-fhir-jpaserver-searchparam/src/main/java/ca/uhn/fhir/jpa/searchparam/extractor/BaseSearchParamExtractor.java
# hapi-fhir-jpaserver-searchparam/src/main/java/ca/uhn/fhir/jpa/searchparam/extractor/ISearchParamExtractor.java
2020-05-22 17:04:01 -04:00
d1b963321a
MVP EMPI implementation ( #1857 )
...
EMPI Initial Implementation (still plenty of known gaps)
2020-05-22 15:03:20 -04:00
5b2181a563
Implement FHIR Patch ( #1850 )
...
* Start working on FHIRPatch
* More work on fhirpatch
* Work on FHIR Patch
* Add patch
* Test fixes
* Test fixes
* Get tests fixed
* Chnage to trigger a build
* Compile fix
* Dependency version fixes
* Test fix
* COmpile fix
* Try to fix build
* Test fix attempt
* Another build attempt
* Another build tweak
* Cleanup
2020-05-20 19:43:55 -04:00
52c8e3551c
Version bump to 5.1.0-SNAPSHOT
2020-05-15 14:43:32 -04:00
fe0e07a313
Bump to 5.0.1
2020-05-15 05:47:01 -04:00
529e1e1f5e
Merge remote-tracking branch 'remotes/origin/master' into im_20200316_lastn_operation_elasticsearch
2020-05-14 12:09:24 -04:00
1d13e29ac0
Version bump to 5.1.0-SNAPSHOT
2020-05-12 20:04:20 -04:00
d631ecff4a
Prepare for 5.0.0
2020-05-12 11:49:18 -04:00
4cced40b54
Merge remote-tracking branch 'remotes/origin/master' into im_20200316_lastn_operation_elasticsearch
...
# Conflicts:
# hapi-fhir-jpaserver-searchparam/src/main/java/ca/uhn/fhir/jpa/searchparam/extractor/BaseSearchParamExtractor.java
2020-05-05 17:19:32 -04:00
a77aa6a28e
Multitenancy Ticket 2 - #1813 ( #1821 )
...
* Work on multitenancy
* Second ticket started
* More multitenancy work
* Work on tenancy security
* Work on multitenancy
* Test fixes
* Add docs
* cs tweak
* Multitenancy fixes
* Add debug log
* Fix build
* Add headers
* Add partition selection interceptor hook
* Update hapi-fhir-base/src/main/java/ca/uhn/fhir/rest/api/Constants.java
Co-authored-by: Ken Stevens <khstevens@gmail.com>
* Account for review comments
* Resolve FIXMES
* Work on tests
* Test fixes
* A bit more cleanup
* Work on multitenancy
* Update hapi-fhir-docs/src/main/java/ca/uhn/hapi/fhir/docs/ClientExamples.java
Co-authored-by: Ken Stevens <khstevens@gmail.com>
* Update hapi-fhir-docs/src/main/resources/ca/uhn/hapi/fhir/docs/client/examples.md
Co-authored-by: Ken Stevens <khstevens@gmail.com>
* Address review comments
* Allow disabling text modifier indexing
* Add changelog
* Docs fixes
* Address review comment
* Resolve merge conflicts
* Merge master
* Compile fix
* Test fix
Co-authored-by: Ken Stevens <khstevens@gmail.com>
2020-05-05 15:12:15 -04:00
dd749791db
Merge remote-tracking branch 'remotes/origin/master' into im_20200316_lastn_operation_elasticsearch
...
# Conflicts:
# hapi-fhir-jpaserver-searchparam/src/main/java/ca/uhn/fhir/jpa/searchparam/extractor/BaseSearchParamExtractor.java
2020-04-24 16:55:45 -04:00
0e45db0ba9
More cleanup and test fixes.
2020-04-24 16:23:59 -04:00
be5f8191dc
One more bugfix
2020-04-22 09:08:46 -04:00
4a89860f9b
Additional tests and cleanup.
2020-04-17 17:38:42 -04:00
d03ce6533e
Fixed conflicts after merging latest from Master.
2020-04-13 20:01:34 -04:00
925bbbbcdc
Merge remote-tracking branch 'remotes/origin/master' into im_20200316_lastn_operation_elasticsearch
...
# Conflicts:
# hapi-fhir-cli/hapi-fhir-cli-api/src/main/java/ca/uhn/fhir/cli/RunServerCommand.java
# hapi-fhir-cli/hapi-fhir-cli-jpaserver/src/main/java/ca/uhn/fhir/jpa/demo/CommonConfig.java
# hapi-fhir-jpaserver-base/src/main/java/ca/uhn/fhir/jpa/config/dstu3/BaseDstu3Config.java
# hapi-fhir-jpaserver-base/src/main/java/ca/uhn/fhir/jpa/config/r4/BaseR4Config.java
# hapi-fhir-jpaserver-base/src/main/java/ca/uhn/fhir/jpa/config/r5/BaseR5Config.java
# pom.xml
2020-04-13 18:35:15 -04:00
af11763dee
Fixes to command line tool, clean-up and minor re-factoring.
2020-04-13 08:56:56 -04:00
47786660d5
Test fixes
2020-04-07 13:58:24 -04:00
2205d2306c
Move resource provider factory
2020-04-07 10:56:05 -04:00
fef447afee
Work on subscription cleanup
2020-04-04 16:07:01 -04:00
83e673e725
Consolidate changes to Command Line Tool and add/improve tests.
2020-04-03 17:12:04 -04:00
470063e8ab
Subscription cleanup
2020-04-02 21:19:54 -04:00
6baf1995c9
Work on subscription cleanup
2020-04-02 20:30:19 -04:00
f819c91530
Initial implementation of lastn operation.
2020-03-31 21:55:57 -04:00
082c201333
Improve debug logging
2020-03-31 11:20:48 -04:00
9d09466c21
Add debug logging to CLI
2020-03-31 10:49:16 -04:00
22413911bf
Validation api changes ( #1719 )
...
* Validation enhancements
* Work on validation api reworking
* Keep working on validation API
* Keep working on new term API
* Work on validation api
* Ongoing work on validation
* Work on integrating validation
* Work on validation API
* Add to validation API
* Work on validation
* Work on API
* Work on validation
* Work on validation API
* Work on validation API
* Work on validation api
* Work on validation API
* Work on validation api
* Validation API changes
* Work on API
* More work on validationo API
* Work on validation API
* FIxes
* WOrk on validation api
* Work on validation API
* Tests passing!
* More cleanup
* More validation API changes
* Fix intermittent test failure
* Package reorg
* Validation API work
* Work on doocumentation
* Work on API
* More work on new validation API
* Fix errorprone-reported error
* Test fixes
* Documentation updates
* Documentation tweaks
* Work on API
* Bean name adjustments
* Build fixes
* Some test fixes
2020-03-17 13:28:59 -04:00
60f16dd91d
Update to 4.3.x core JAR ( #1715 )
...
* Added optionality for adding resource fetcher
* Added coverage that proves invocations
* Bumped version of fhir.core to latest version. Added wrapping of AssumeValidRestReferences
* Added optionality for adding resource fetcher
* Added coverage that proves invocations
* Bumped version of fhir.core to latest version. Added wrapping of AssumeValidRestReferences
* Start working on converter
* Account for compile errors
* Test fix
* Work no validator
* Work on getting core working
* Add some test coverage
* Many test fixes
Co-authored-by: Jens Kristian Villadsen <46567685+jvitrifork@users.noreply.github.com>
2020-02-17 14:28:29 -05:00
ddc7b601ee
Version bump to 4.3.0-SNAPSHOT
2020-02-16 19:23:22 -05:00
4fd80cfca7
Bump to 4.2.0
2020-02-16 19:00:15 -05:00
4989361922
One more test fix
2020-02-03 21:51:13 -05:00
9c7f5e1b9b
License header updates
2020-01-12 10:15:08 -05:00
0b682eeb1f
Fix broken constructor
2019-12-18 14:28:28 -05:00
68a7613f9e
Merge remote-tracking branch 'remotes/origin/master' into ks-20191119-scheduler
...
# Conflicts:
# hapi-fhir-cli/hapi-fhir-cli-api/src/main/java/ca/uhn/fhir/cli/BaseFlywayMigrateDatabaseCommand.java
2019-12-16 08:58:26 -05:00
e3922d5c01
pre-review cleanup
2019-12-15 08:32:45 -05:00
7c3514fecc
Skip versions tested
2019-12-14 19:00:58 -05:00
4946fffac2
pass test
2019-12-14 17:27:17 -05:00
96003a44cc
Correct issue with CLI
2019-12-13 13:40:40 -05:00
931a41938b
added dry-run output to both Flyway and TaskOnly migrator
...
dry-run only calls TaskOnly migrator now
2019-12-12 14:42:43 -05:00
7c1544d8f3
strip comments from sql before splitting ; (to avoid ; in comments)
2019-12-11 14:02:24 -05:00
176bf657a7
Merge remote-tracking branch 'remotes/origin/master' into ks-20191119-scheduler
...
# Conflicts:
# hapi-fhir-jpaserver-migrate/src/main/java/ca/uhn/fhir/jpa/migrate/tasks/HapiFhirJpaMigrationTasks.java
2019-12-10 10:10:41 -05:00
bd1b41ff82
change out-of-order-permitted from environment variablet to flag to work like dont-use-flyway
2019-12-09 16:44:24 -05:00
bfa89483e7
Merge remote-tracking branch 'origin/master' into ks-20191119-scheduler
2019-12-06 18:13:38 -05:00
438ef70fdb
Reuse connections in brute force migrator
2019-12-06 16:52:26 -05:00
6c432733d5
Merge remote-tracking branch 'remotes/origin/master' into ks-20191119-scheduler
2019-12-05 18:03:02 -05:00
d91617e923
Account for review changes ( #1623 )
2019-12-05 18:01:45 -05:00
James Agnew
ianmarshall
Tadgh
Ken Stevens