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mirror of https://github.com/hapifhir/hapi-fhir.git synced 2025-03-09 14:33:32 +00:00

7965 Commits

Author SHA1 Message Date
Tadgh
57bb11797e fix 2021-05-13 15:46:26 -04:00
Tadgh
af1b0965a4
Merge pull request from hapifhir/issue-2655-configurable-expunge-size
Toggleable searchForIds size
2021-05-13 13:29:17 -04:00
Tadgh
15ea4fb555 Tidy test 2021-05-13 10:47:26 -04:00
Tadgh
3428d71023 Add toggle. Add test. Add changelog. add docs 2021-05-13 10:29:07 -04:00
Ken Stevens
316e7e0d6d
Ks 20210512 value set expansion id ()
* tested and fixed

* changelog
2021-05-12 21:38:29 -04:00
Tadgh
1fe51d1ca2
Merge pull request from hapifhir/issue-2648-consent-interceptor-metadata
Prevent consent interceptor from running on metadata
2021-05-11 13:18:50 -04:00
Tadgh
d70b1866c1 Remvoe dead space 2021-05-11 10:54:14 -04:00
Tadgh
e6328dbcae Reflect move in comparison 2021-05-11 10:53:36 -04:00
Tadgh
d6252526c3 Move member variable 2021-05-11 10:53:10 -04:00
Tadgh
424ec2118b Add implementation. Add test. Add changelog 2021-05-11 10:31:29 -04:00
James Agnew
3015438a0c
Avoid query cache poisoning ()
* Avoid query cache poisoning

* Test fixes

* Add changelog
2021-05-11 08:39:38 -04:00
James Agnew
43631d4937
Account for NOPs in Auto-Versioned References ()
* Account for NOPs in auto-versioned references

* Add docs

* Add tests
2021-05-08 18:09:50 -04:00
jamesagnew
48f2e2c01f License header 2021-05-07 18:29:12 -04:00
jamesagnew
176be4df16 Merge branch 'master' into rel_5_4 2021-05-07 17:44:47 -04:00
jamesagnew
63c4b22cd3 Undo bump 2021-05-07 17:42:50 -04:00
jamesagnew
17e41520a4 Version bump 2021-05-07 17:41:39 -04:00
James Agnew
5a9f499fbf
Resolve weakness in history operation ()
* Address DOS issue in History operation

* Work on history caching

* Add docs

* Add changelog

* Resolve test failures

* Test fixes

* Test fix

* Test fixes
2021-05-07 12:04:59 -04:00
Tadgh
64564d5f1e
Merge pull request from hapifhir/issue-2634-increase-src-path-length
Increase length of HFJ_RES_LINK SRC_PATH field.
2021-05-06 11:25:54 -04:00
Tadgh
cf864c2078 Merge remote-tracking branch 'origin/master' into issue-2634-increase-src-path-length 2021-05-06 09:10:48 -04:00
James Agnew
1424d48912
Avoid NPE in concept mapping () 2021-05-06 05:25:38 -04:00
Ken Stevens
a4856bba17
fix iBundleProvider.getResources(from,to) throwing a NPE ()
* fix iBundleProvider.getResources(from,to) throwing a NPE

* change log

* review feedback

* rename test to IT that has concurrency failures
2021-05-05 21:50:51 -04:00
Tadgh
98cc301a27 Allow failure during migration 2021-05-05 17:01:57 -04:00
Tadgh
4031968357
Calls with zero request details and non-partitionable resource automatically go to default now. This updates the test to pass in servletrequest details, simulating a user request () 2021-05-05 16:57:12 -04:00
Tadgh
d17ee2eb78 Add changelog 2021-05-05 16:01:29 -04:00
Tadgh
bf37d1db74 Fix test 2021-05-05 15:36:20 -04:00
Tadgh
e15825b336 Increase length, add test 2021-05-05 15:29:02 -04:00
Tadgh
95f951e776
Merge pull request from hapifhir/hotfix/broken-refresher-cache
Fix for multitenant environment cache refreshing
2021-05-04 16:27:31 -04:00
Tadgh
0fb0419a67 If null, return default partition during create 2021-05-04 16:22:01 -04:00
Tadgh
fcc662da79 Fix not sending request details 2021-05-04 16:18:34 -04:00
dependabot[bot]
9e61136c2d
Bump greenmail from 1.5.11 to 1.6.3 ()
Bumps [greenmail](https://github.com/greenmail-mail-test/greenmail) from 1.5.11 to 1.6.3.
- [Release notes](https://github.com/greenmail-mail-test/greenmail/releases)
- [Commits](https://github.com/greenmail-mail-test/greenmail/compare/release-1.5.11...release-1.6.3)

Signed-off-by: dependabot[bot] <support@github.com>

Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>
2021-05-03 17:31:03 -04:00
KevinIsAProgrammer
75c74a22db
Merge pull request from hapifhir/2590_preserve_the_ID_value_of_the_resources_in_the_package_loader
2590 preserve the id value of the resources in the package loader
2021-05-03 15:39:14 -04:00
Kevin Hartmann
320e8379b3 Now convert pure numeric ids to "npm-<id>". 2021-05-03 12:55:17 -04:00
James Agnew
172ea770b8
Fix transaction references () 2021-05-03 12:25:51 -04:00
jamesagnew
8be50641e5 License header 2021-05-03 08:45:54 -04:00
jamesagnew
cc05ff9ad4 Fix openapi interceptor bug 2021-05-03 08:09:58 -04:00
jamesagnew
82be821628 Credit for 2021-05-03 08:03:49 -04:00
Hanan Awwad
871914bd3b
Concept properties are not being saved while using the operation apply-codesystem-delta-add ()
* fix issue 

* revert the indentation back.

* revert-back untouched changes.

* saving concept properties using the operation apply-codesystem-delta-add

* fix test cases; add check for null properties

* fix test; expected file descriptors
2021-05-03 08:02:20 -04:00
dependabot[bot]
91fa23b11a
Bump fhir_core_version from 5.3.10 to 5.3.11 ()
Bumps `fhir_core_version` from 5.3.10 to 5.3.11.

Updates `org.hl7.fhir.utilities` from 5.3.10 to 5.3.11

Updates `org.hl7.fhir.convertors` from 5.3.10 to 5.3.11

Updates `org.hl7.fhir.validation` from 5.3.10 to 5.3.11

Updates `org.hl7.fhir.dstu2` from 5.3.10 to 5.3.11

Updates `org.hl7.fhir.dstu2016may` from 5.3.10 to 5.3.11

Updates `org.hl7.fhir.dstu3` from 5.3.10 to 5.3.11

Updates `org.hl7.fhir.r4` from 5.3.10 to 5.3.11

Updates `org.hl7.fhir.r4` from 5.3.10 to 5.3.11

Updates `org.hl7.fhir.r5` from 5.3.10 to 5.3.11

Signed-off-by: dependabot[bot] <support@github.com>

Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>
2021-05-03 07:58:55 -04:00
jamesagnew
5db01f3139 Build fixes 2021-05-03 05:57:45 -04:00
James Agnew
593230f6bf
Fix openapi redirect ()
* Fix redirect for openapi

* FIx deps
2021-05-03 05:32:34 -04:00
jamesagnew
573097379d Credit for 2021-05-02 17:20:16 -04:00
Jari Maijenburg
6dc12603bb
Fixed GraphQL token parameter matching bug () 2021-05-02 17:18:51 -04:00
James Agnew
0cea403800
Fix vulnerability warning on maven plugin ()
* Fix vulnerability warning on maven plugin

* Compile fixes

* Fix bootstrap dep

* Test fix

* Fix tests

* FIx deps
2021-05-02 12:14:32 -04:00
James Agnew
970a9884f0
Avoid tag definition constraint ()
* Avoid tag definition constraint failure

* Version bumps

* Add changelog

* Avoid guava issue

* Test fix

* Test fix

* Bump pom
2021-05-01 17:16:15 -04:00
Kai Kewley
55ef6f8653
Add Snowstorm to the points map. () 2021-04-30 19:05:46 -04:00
jamesagnew
12c0bcda47 Credit for 2021-04-30 19:03:47 -04:00
Tuomo Ala-Vannesluoma
fbca9f8060
Offset query fixes ()
* Fix new searchbuilder limit similar to legacy searchbuilder

* Fix returning includes when using offset query

* Add unit tests for offset query with include

* Only use count param if offset is given (sometimes we want to search synchronously more if DAO is used directly)

* Throw if offset is tried to use with everything operations

* Do not offer offset paging for everything operations and fix tests to assert that
2021-04-30 19:01:27 -04:00
Kevin Hartmann
e8ac24b4df Test now passes. 2021-04-30 15:17:22 -04:00
Kevin Hartmann
b3afe41de8 Added test to make sure we have loaded the expected package id. 2021-04-30 15:14:19 -04:00
James Agnew
292b350f2c
Bump Junit for to avoid OWASP flag () 2021-04-30 14:39:16 -04:00