9b2826f3c6
Handle searches with chained slash value ( #1503 )
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* Work on test case for bug with searches
* Work on tests
* Fix issue with slashes in reference chain parameter for JPA server
2019-09-24 14:31:05 -04:00
6f44d7c360
Fix issue deleting CodeSystem resources ( #1316 )
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* Fix deleting CodeSystem resources
* Test fixes
* Address review comments
2019-09-23 15:58:57 -04:00
58b7e3a923
Start splitting docs into separate project
2019-09-22 08:58:17 -04:00
eddb98084d
Move PreferReturnEnum back to original location to avoid regressions
2019-09-19 15:48:58 -04:00
5e74a6f3e8
Merge branch 'master' of github.com:jamesagnew/hapi-fhir
2019-09-17 16:01:53 -04:00
4a751cbfc5
Integrate Bulk Export ( #1487 )
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* Start working on subscription processor
* Work on new scheduler
* Test fixes
* Scheduler refactoring
* Fix test failure
* One more test fix
* Updates to scheduler
* More scheduler work
* Tests now all passing
* Ongoing work on export
* Ongoing scheduler work
* Ongoing testing
* Work on export task
* Sync master
* Ongoing work
* Bump xml patch version
* Work on provider
* Work on bulk
* Work on export scheduler
* More test fies
* More test fixes
* Compile fix
* Reduce logging
* Improve logging
* Reuse bulk export jobs
* Export provider
* Improve logging in bulk export
* Work on bulk export service
* One more bugfix
* Ongoing work on Bulk Data
* Add changelog
2019-09-17 16:01:35 -04:00
d3c8962ae6
Add some tests
2019-09-17 14:04:35 -04:00
722c7a8211
Work on GraphQL updates
2019-09-06 14:56:17 -04:00
9428430822
Add support for Resource.meta.source ( #1438 )
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* Work on indexing source
* Work on tests
* Refactor query count tests
* Unit test fixes
* Add some tests
* DAO fix
* Fix compile error
* Unit test fix
* Cleanup
* Test fix
* Fix compile error
* One more test fix
2019-08-21 11:17:43 -04:00
e1b43d811f
Version bump to 4.1.0-SNAPSHOT
2019-08-14 14:06:06 -04:00
3f22456b0f
Bump version to 4.0.0
2019-08-14 11:06:26 -04:00
0c41f35583
Add test for #1399
2019-08-07 10:44:42 -04:00
a4ca5374ec
Add terminology delta operations ( #1401 )
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* Start work on delta operations
* Add changelog
* Some build fixes
* Move upload terminology command to CodeSystem resource
* Updates
* Some test fixes
* Add changelog
* Some test fixes
* More test fixes
* Test fix
* Add additional tests
* Transaction boundary fixes
2019-07-29 17:46:42 -04:00
7e3d062d15
Switch default client to JSON ( #1392 )
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* Start work on changing over
* Update tests
* More test fixes
* Work on generalizing binary access provider a bit
* Add expunge capability to binary storage, and also support actual binary
resources
* Work on binary provider
* Get the DB bound binary storage service working
* Test fixes
* Compile fix
* Fix compile error
* Test fix
* Test tweak
* Trying to figure out an intermittent failure
* Work on tests
* More work on tests
* Another test fix
2019-07-22 21:27:10 -04:00
7831e8a0ed
Add support for $snapshot generation and validation based on snapshots
2019-07-14 16:15:56 -04:00
120b93f204
Use HL7 FHIR Core Structures ( #1382 )
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* Ongoing work on core structures suport
* Ongoing work on this merge
* Ongoing work to clean up structures
* Credit for #1179
* Address compile issues
* Latest changes
* Work on parallel execution
* Work on getting tests passing
* Add H2 to migrator
* Test fix
2019-07-14 10:16:40 -04:00
a352137938
Test fixes
2019-07-11 21:10:30 -04:00
32a8e1aead
Omit extensions when encoding in summary mode (except for
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CapabilityStatement)
2019-07-11 16:28:50 -04:00
73daec633f
Test fix
2019-07-07 13:07:27 -04:00
34f7d4ddbd
Refactor ServerConformanceProvider so that it no longer keeps any state
2019-07-07 12:57:31 -04:00
1fd99dac63
Enable optional cascading deletes on JPA server ( #1363 )
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* Start working on cascading deleets
* WOrk on cascading deletes
* Work on cascading deletes
* Enable cascading deletes
* Cascade deletes almost working
* FIx test
* Test fix
2019-06-28 17:32:39 -04:00
53b47ed580
Ensure that parsed reesource is available to interceptors
2019-06-27 18:23:10 -04:00
10d969c514
Add Consent Service ( #1359 )
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* Initial consent svc
* Ongoing consent svc work
* Add docs
* Ongoing consent service work
* Work on consent service
* More work on consent svc
* License header updates
* Ongoing consent svc work
* Some test fixes
* Some test fixes
* More work on consent svc
* Tests working
* Test fix
* Propagate RequestDetails to everything in JPA server
* More interceptor tweaks
* Fix compile error
* One more tweak to captured SQL
* Ongoing interceptor tweaks
* Ongoing interceptor tweaks
* More interceptor tweaks
* Interceptor tweaks
* Tweaks to tests
* Fix tests
* Test fix
* Raise warnings when encoding extensions with missing values
* Consent service work
* More interceptor tweaks
* Consent interceptor tweaks
* Add logging to test
2019-06-27 16:35:29 -04:00
8bb010bb18
Test fixes
2019-06-22 17:42:02 -04:00
0fbde2a4e5
Fix #1352 - Don't fail to create observation with a value type of
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SampledData
2019-06-22 16:43:25 -04:00
3274693576
FIx a test
2019-06-22 16:31:55 -04:00
95876ec3cb
Merge branch 'master' of github.com:jamesagnew/hapi-fhir
2019-06-22 16:24:07 -04:00
638cb976fd
Fix #1250 - Don't include Bundle.entry.response on search results
2019-06-22 16:23:32 -04:00
4ad1808da3
Propagate RequestDetails to everything in JPA server ( #1358 )
2019-06-22 15:18:06 -05:00
c7798fee48
Test fix
2019-06-18 05:40:00 -04:00
b2e99cf035
Add support for conditional patch ( #1348 )
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* Add support for conditional patch
* Add changelog
* Test fix
2019-06-17 16:12:05 -04:00
b56f59542a
Move JettyUtil to new module
2019-06-14 18:34:45 -04:00
aab7bb6b64
Issue-1325: Let OS assign random ports to servers during testing, and let tests get the port of the running server once the OS has assigned a port. Delete PortUtil and similar utilities.
2019-06-14 18:34:45 -04:00
50a8c66bf5
Version bump to 4.0.0-SNAPSHOT
2019-05-30 17:13:03 -04:00
73aa53be8f
Release 3.8.0
2019-05-30 16:50:04 -04:00
3bb3c3a383
Preserve contained resource meta when encoding to dao ( #1311 )
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* Preserve contained resource meta when encoding with: parser.setDontEncodeElements(ResourceMetaParams.EXCLUDE_ELEMENTS_IN_ENCODED)
* - Correct so security, lastUpdated and versionId is not encoded
- Added test
2019-05-22 17:11:03 -04:00
d4d3178621
A couple of test fixes
2019-05-11 15:04:44 -04:00
6b37525f2d
Clean up redundant dependencies ( #1306 )
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* Remove a bunch of unneedd deps
* Test fix
* Disable useless test
2019-05-09 12:51:13 -04:00
738c2c1797
Interceptor framework refactoring ( #1287 )
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Interceptor framework overhaul
2019-04-24 14:32:30 -04:00
311246e5f0
Merge pull request #1255 from jamesagnew/addFetchValueSet
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added fetchValueSet to IValidationSupport and made it public
2019-04-15 17:03:56 -04:00
c8f2e4bbc9
Return HTTP 400 for missing body on POST and PUT
2019-04-14 12:32:09 -04:00
15fda25771
added fetchValueSet to IValidationSupport and made it public to enable overwriting it in subclasses
2019-03-27 17:35:01 +01:00
e85bec2858
Ja inline references ( #1252 )
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* Use a single IN clause for OR reference searches
* Add changelog
* One more attempt at getting the free port util to actually work... sigh
* One more tweak to free ports
* Bundle fix
2019-03-26 10:42:42 +01:00
e3ecf21fa9
One more test fix
2019-03-12 13:24:18 -04:00
00a8f8c759
Fix broken build
2019-03-12 13:13:13 -04:00
3433ecfd14
Test fixes
2019-03-11 16:14:34 -04:00
71a07c0239
Refactor the way that contexts are used in narrative generator
2019-03-11 16:05:25 -04:00
dcfacfea49
Has param no in ( #1232 )
2019-03-10 20:50:24 -04:00
f8b8f2d1b0
Move process-message to the correct level
2019-03-06 16:12:43 -05:00
48c10bddc5
Narrative Generator refactoring ( #1219 )
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* Starting work on this
* Working on narrative templates
* Work on new narrative system
* Account for some failing tests due to refactoring of narrative mode
* Another test fix
* More test fixes
* One more test fix
* Work on searches
* Address review comments
2019-02-27 14:59:57 -05:00
0f8c8d18e2
Bump version to 3.8.0-SNAPSHOT
2019-02-06 20:02:28 -05:00
207015c3af
Version bump to 3.7.0
2019-02-05 21:36:38 -05:00
e401ec86e4
Enhanced elements ( #1192 )
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Squashed merge: Add elements exclude mode
* Start working on elements enhancement
* Work on elements projection
* Work on elements filter
* Feature is now working
* Just some cleanup
* Address compile issues
2019-02-03 16:41:33 -05:00
737ee9e97c
add JSON-like tests for DSTU3 and R4
2019-01-30 17:32:06 -08:00
68fae08f20
Fix casing in base64Binary type
2019-01-23 08:34:09 -05:00
b8755615b2
Allow AuthorizationInterceptor to read patients if the user has read
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access to the individual instance
2019-01-14 13:53:08 -06:00
93bf2788ec
Add subscription narrowing interceptor and refactor RuleBuilder to be a
...
bit cleaner
2019-01-12 14:23:26 -06:00
3c260e5ef2
Ignore unfinished test
2019-01-10 07:36:37 -07:00
b8f200f897
Correctly expose chains in DSTU2 server conformance statmeent
2019-01-10 06:15:31 -07:00
f8b232bb67
Issue 430: Generate OperationDefinitions for named queries, fix minor errors in generation of OperationDefinition for operations. Closes #430 .
2019-01-09 05:41:08 -05:00
62ae71c1c6
Allow authorizing delete operations via a transaction in
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AuthorizationInterceptor
2019-01-07 15:43:36 -05:00
a8a97ae6b2
Two test fixes
2019-01-07 09:18:11 -05:00
bb6e392e2d
Merge branch 'master' of github.com:jamesagnew/hapi-fhir
2019-01-07 09:17:37 -05:00
c104923855
Add an additional test for transaction processing
2019-01-07 09:17:19 -05:00
3d94761bcb
Improve response for transactions
2019-01-06 18:08:32 -05:00
b2c7a2003e
Prevent a nullpointerexception in AuthorizationInterceptor
2019-01-06 16:42:29 -05:00
14a132a937
Squashed commit of the following:
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commit 965965583070da25b76f
2018-12-27 17:58:47 -05:00
a0cb7edd08
Version bump a few dependencies
2018-12-22 20:13:03 -05:00
d46878be86
unit tests for head operation
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-reverting the removal of the unit test but with the correct status code
-added unit test for a valid patient
2018-12-21 05:40:35 -05:00
65a54bfe29
the test for head operation is not needed anymore in the
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unsupportedhttpmethods
2018-12-21 05:40:35 -05:00
b442982310
Add media interceptor
2018-12-08 18:49:58 -05:00
b41c222880
Require explicit declaration of authorizationinterceptor operation rules
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on whether the response is authorized or not
2018-11-23 14:25:46 -05:00
58388bb614
Allow client to return methodoutcome instead of resdource for operation
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call
2018-11-19 11:11:49 +01:00
e4f6b3e9a2
Add a warning if an invalid class is scanned
2018-11-16 10:42:21 +01:00
4b099cf057
Fix #944 - NPE when using a custom resource class that has a @Block
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child
2018-11-15 16:11:55 +01:00
75210d614b
Bump to 3.7.0-SNAPSHOT
2018-11-12 22:37:52 -05:00
63af04a7b4
Prepare for 3.6.0 release
2018-11-12 05:40:55 -05:00
80b0f14c4b
Merge pull request #1103 from RuthAlk/own_message_resolver_3.6.6
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Allow slotting in own IMessageResolver
2018-11-08 13:22:48 -05:00
76cd3f6b47
Allow client assigned IDs to be purely numeric in JPA server if
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configured to do so
2018-11-07 18:25:50 -05:00
2656d008d6
FIx broken test
2018-11-07 11:26:23 +01:00
4b790eddb6
Add additional authorization test
2018-11-07 11:01:29 +01:00
4315900ac0
Merge branch 'philips-3.6.0'
2018-11-01 09:15:27 -04:00
3bfdc61866
Fix a couple of test failures
2018-11-01 09:15:03 -04:00
729bbe04d0
Allow slotting in own IMessageResolver
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This is useful in case we want to define our own way of translating
the codes in the thymeleaf templates.
2018-10-26 12:13:58 +02:00
21a0390e6e
Even more additional work on FhirTerser.getValues(...) enhancements. Almost ready for review.
2018-10-24 11:43:19 -04:00
4e414a16fb
More additional work on FhirTerser.getValues(...) enhancements. Ready for review.
2018-10-22 18:37:34 -04:00
688e159493
Additional work on FhirTerser.getValues(...) enhancements.
2018-10-22 18:22:03 -04:00
225007d681
Completed work on FhirTerser.getValues(...) enhancements.
2018-10-19 18:24:26 -04:00
cd6d4302c3
Incremental work on FhirTerser.getValues(...) enhancements.
2018-10-19 15:13:51 -04:00
4e252063b8
Allow transactions and batches with transaction permission in
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AuthorizationInterceptor
2018-10-16 19:54:55 -04:00
90a3ead24f
Merge pull request #1089 from srdo/issue-545
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Issue-545: Base resource profile links should point to http://hl7.org …
2018-10-09 12:05:47 +02:00
c64567be68
More redundant test cleanup
2018-10-04 09:15:12 -04:00
597c8dbafe
Remove redundant tests
2018-10-04 08:57:37 -04:00
b265c0281b
Expand search range when searching by date
2018-10-03 21:31:01 -04:00
2050355e1e
Issue-545: Base resource profile links should point to http://hl7.org/fhir/StructureDefinition (invariant sdf-7 in spec)
2018-10-03 13:36:34 +02:00
3e445faf47
Squashed commit of the following:
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commit df641506885e09e63f80efc6c658d01a1a3a8142
Author: James Agnew <jamesagnew@gmail.com>
Date: Sat Sep 29 13:47:22 2018 -0400
Shrink validation resources
commit 4c1550eafa26f4235b4b8804741aecc03276b5c6
Author: James Agnew <jamesagnew@gmail.com>
Date: Fri Sep 28 22:45:28 2018 -0400
Updates to get R4 working
commit 8332f15291006691ed9b07ead3e3524b0fc85510
Author: jamesagnew <jamesagnew@gmail.com>
Date: Fri Sep 28 09:02:13 2018 -0400
Ongoing work on gettign R4 working
commit f7146cab7aed937bb625a8aec95744d76db00041
Author: James Agnew <jamesagnew@gmail.com>
Date: Fri Sep 28 05:21:01 2018 -0400
More work on sync
commit f48de4a10b1bab2584fee813017d9b27b237bfa9
Merge: 9e4f3cc722 aacb78b779
Author: James Agnew <jamesagnew@gmail.com>
Date: Thu Sep 27 20:11:29 2018 -0400
Merge branch 'sync_r4' of github.com:jamesagnew/hapi-fhir into sync_r4
commit 9e4f3cc722668aae31a77b19bf9b032af3ae01b0
Author: James Agnew <jamesagnew@gmail.com>
Date: Thu Sep 27 20:11:19 2018 -0400
Fix compile error
commit 7ec29e0ceda8f9013cbabb95767cbe15b4b81303
Merge: 23f7517325 002c4b3ff7dfb4de86f1
2018-09-29 13:48:35 -04:00
706e004b9d
Bump to 3.6.0-SNAPSHOT
2018-09-19 10:24:48 -04:00
daef975734
Version bump to 3.5.0
2018-09-08 07:22:21 +08:00
f4a21eadda
Fix this issue
2018-09-01 14:38:52 +08:00
fee0166800
Work on removing validstion cache
2018-08-28 05:26:06 -04:00
James Agnew
Stig Rohde Døssing
basecade
patrick-werner
Ken Stevens
bdenton
Stig Rohde Døssing
Corina Dalaban
Ruth Alkema
Diederik Muylwyk