honeymoose
/
hapi-fhir
mirror of https://github.com/hapifhir/hapi-fhir.git
1
0
Fork 0
Code Issues Packages Projects Releases Wiki Activity
1,905 Commits 683 Branches 130 Tags 1.2 GiB
Commit Graph

343 Commits

Author SHA1 Message Date
jamesagnew 944afc2785 Add better constructors for date types 2016-01-20 07:40:57 -05:00
James Agnew f9960b22d5 Clean up validation 2016-01-15 18:44:28 -05:00
James Agnew d290110126 Fix validation 2016-01-15 18:02:20 -05:00
James Agnew 589059256f Correct issues uncovered during connectathon 2016-01-11 07:42:13 -05:00
petervanhoute 8dadc77420 create jax-rs client 2016-01-08 12:01:56 +01:00
James Agnew 479da24cfb Bump license files 2016-01-07 08:50:07 -05:00
jamesagnew 09b0982df1 Merge branch 'hl7org_dstu21' 2016-01-01 17:00:58 -05:00
jamesagnew 056900f324 Lots more work on DSTU2.1 structures 2015-12-30 11:27:12 -06:00
jamesagnew 7692e5d714 More work on DSTU2.1 structs 2015-12-22 09:32:06 -05:00
jamesagnew 2469aa3725 Lots of DSTU2.1 structure work 2015-12-20 23:35:47 -05:00
Bill de Beaubien c66429ef3c #274 - test illustrating bug 2015-12-20 21:09:58 -05:00
jamesagnew 6ac62a5b46 Merge branch 'master' into hl7org_dstu21 2015-12-15 20:33:31 -05:00
jamesagnew 3005c9a766 Still working on unit tests 2015-12-15 09:11:01 -05:00
jamesagnew 22ff1db183 Work on tests 2015-12-15 07:14:21 -05:00
jamesagnew d95bd269c0 Correctly encode value[x] field names when the datatype is a profiled type such as markdown 2015-12-14 21:04:27 -05:00
jamesagnew 0a0daedcfd Still not working DSTU2.1 2015-12-09 22:49:02 -05:00
jamesagnew ea89f3af28 Correctly return profile 2015-12-09 07:07:05 -05:00
James Agnew 2f8278ff78 Fix build 2015-12-02 10:10:10 -05:00
jamesagnew 9dbeee3576 Merge branch 'master' of github.com:jamesagnew/hapi-fhir 2015-12-01 07:49:52 -05:00
jamesagnew 1eddb4db7f Delete commented line per #251 2015-12-01 07:49:31 -05:00
de Beaubien, Bill cc0bbc2f43 #264 - added test to demonstrate bundle validation issue 2015-11-30 12:38:43 -05:00
jamesagnew 07078e4ce3 Add GZip support to client and server for client-to-server uploads 2015-11-29 15:03:28 -05:00
jamesagnew e6b47855e6 Merge branch 'master' of git://github.com/petervanhoute/hapi-fhir into petervanhoute-master 2015-11-27 14:59:53 -05:00
James Agnew a046afe1d0 Merge pull request #259 from nrpeterson/boundcodeableconcept-serialization 
Add serializability for BoundCodeableConceptDt
 2015-11-26 06:59:14 -05:00
James Agnew 1fe3bb9ff0 Updates from DevDays 2015-11-23 06:13:02 -05:00
Nick Peterson 13b3601843 Make IBoundCodeableConcept and IValueSetEnumBinder extend java.io.serializable; add a test to verify that MaritalStatusCodesEnum in DSTU2 is now serializable. 2015-11-20 12:15:31 -08:00
James Agnew 2f12c9ed01 Bump version to 1.4-SNAPSHOT 2015-11-15 20:11:05 -05:00
James Agnew f9f33f059b Version bump to 1.3 2015-11-15 12:53:02 -05:00
James Agnew 614b7e09e5 Bump to 1.0.2 FHIR definitions 2015-11-15 12:22:56 -05:00
jamesagnew f13820b627 Fix #248 - Remove failing test in Italian locale 2015-11-03 22:22:13 -05:00
James Agnew d3685e72ba Fix #241 and fix #247 - Don't encode UUID IDs on resources, and preserve 
bundle type when retrieving pages
 2015-10-29 15:38:19 -04:00
petervanhoute 367163c46a fix return url 2015-10-29 15:55:37 +01:00
jamesagnew 30ab0203a3 Refactor search capability in JPA out of resource specific module 2015-10-28 08:44:52 -04:00
jamesagnew f3552015cc Work on splitting out search in JPA 2015-10-27 20:23:49 -04:00
jamesagnew 5a2ee77142 Parser (XML and JSON) shouldn't encode an ID tag in resources 
which are part of a bundle when the resource has a UUID/OID
				            ID.
 2015-10-26 22:47:06 -04:00
jamesagnew 69658ab754 Merge branch 'master' of github.com:jamesagnew/hapi-fhir 2015-10-23 08:22:40 -04:00
jamesagnew eea406e10e ResourceReferenceDt#loadResource(IRestfulClient) did not 
use the client's read functionality, so it did not
				            handle JSON responses or use interceptors. Thanks to
								            JT for reporting!
 2015-10-23 08:21:25 -04:00
James Agnew 8d515feb6d Fix #242 - Allow compartment and read method to coexist for server 2015-10-21 11:58:19 -04:00
James Agnew ec623ac55f Tests passing 2015-10-16 10:29:31 -04:00
James Agnew 0430eb1626 Merge branch 'master' of github.com:jamesagnew/hapi-fhir 2015-10-13 12:13:43 -04:00
jamesagnew 6d93cbcaae Get content search working correctly 2015-10-13 09:18:34 -04:00
James Agnew 16989435b0 Don't export a _format on paging links if the request didn't have one 2015-10-09 17:42:45 -04:00
de Beaubien, Bill 43f21c0dcf #241 - added ignored test demonstrating failure 2015-10-09 08:48:54 -04:00
James Agnew 4dbd180cf6 Clean up testing 2015-10-08 17:38:14 -04:00
petervanhoute 7f910974a2 create seperate response and server interfaces and classes for servlets and jaxrs 2015-10-07 17:11:16 +02:00
James Agnew 9fef4f6bab Allow valueset operations to work against type in JPA 2015-10-06 18:53:09 -04:00
James Agnew b62eb1168c Allow server operations to work at the type level 2015-10-06 11:45:49 -04:00
James Agnew 3d330de8ef Fix compile issue 2015-10-06 06:57:55 -04:00
James Agnew 80575b5380 Generic client now allows search by URL 2015-10-05 15:30:30 -04:00
James Agnew 48d56b4722 Fix connectathon discovered issues 2015-10-03 23:52:30 -04:00
James Agnew aa32e6f0a9 Improve ValueSet operations in JPA 2015-10-02 12:37:56 -04:00
petervanhoute b4df6f9612 add server using jaxrs 2015-10-02 11:27:21 +02:00
James Agnew 68a5bd3b23 Add tests 2015-09-29 17:04:14 -04:00
James Agnew 1cc6a05273 FIx validation for resources using v2 tables 2015-09-29 10:51:36 -04:00
jamesagnew 9492744018 Work on subsciprions 2015-09-28 09:06:57 -04:00
James Agnew 51a046ea26 Handle sort by number, uti and token 2015-09-25 16:53:22 -04:00
James Agnew 1361e69177 Respect server default encoding if an Accept header is received which 
indicates equal weight for both encodings
 2015-09-24 17:52:52 -04:00
James Agnew 072c1ece87 Send Accept header on client requests, and allow string responses in 
QuestionnaireResponse validator for questions of type OPENCHOICE
 2015-09-24 13:40:07 -04:00
jamesagnew 70eff0dc7f Improve error message when $meta-add and $meta-delete are called with no meta element in the 
input parameters. Also improve OperationOutcome rendering in narrative generator.
 2015-09-24 08:36:25 -04:00
jamesagnew 7e6844be56 Improve error message when JSON parser finds an object where an array is expected 2015-09-24 07:27:43 -04:00
jamesagnew d59c0ff404 Correctly index reference paths with multiple paths, and don't store duplicate indexes in JPA 2015-09-20 08:23:03 -04:00
jamesagnew 70e942e9f8 Version bump to 1.3-SNAPSHOT 2015-09-19 11:00:57 -04:00
jamesagnew 31934ff582 Version bump to 1.2 2015-09-16 07:09:03 -04:00
James Agnew 73121e222c Add tests 2015-09-15 14:11:55 -04:00
jamesagnew d0bac3d419 Work on CLI tool 2015-09-13 22:06:31 -04:00
jamesagnew 48ee2cbee8 JPA server now correctly suppresses contents of deleted resources 
in history
 2015-09-12 09:45:12 -04:00
jamesagnew 847b382ee8 Add tests 2015-09-10 07:51:13 -04:00
jamesagnew 8120ab2228 Merge branch 'master' of github.com:jamesagnew/hapi-fhir 2015-09-09 22:46:48 -04:00
jamesagnew 437625505c Add some tests and some cleanup of unused code 2015-09-09 22:41:10 -04:00
de Beaubien, Bill 5b64a7f569 #221 and now, with null-checking so the tests don't break... 2015-09-09 17:06:27 -04:00
de Beaubien, Bill b1db2bf2d8 Merge branch 'master' of https://github.com/jamesagnew/hapi-fhir 2015-09-09 16:47:20 -04:00
de Beaubien, Bill 27764da19a #221 Conformance date now defaults to the build date/time 2015-09-09 16:47:07 -04:00
James Agnew 2a3088f2e2 Add tests 2015-09-09 16:08:21 -04:00
jamesagnew aa8334a99a Merge remote-tracking branch 'upstream/master' into osgi-pull-request 2015-09-09 08:41:45 -04:00
jamesagnew f7667d2565 Add test 2015-09-09 07:34:31 -04:00
bdenton daedf63c46 Decouple RestfulService and ServerConformanceProvider to avoid cycle in 
Spring wiring
 2015-09-09 07:01:03 -04:00
James Agnew c534fb9604 Hopefully tests should pass now - Not using profile datatypes in encoded 
choice names has been a pain!
 2015-09-08 14:00:11 -04:00
jamesagnew bb5816d8e9 Fix second part of #216 - Correctly encode choice elements on profiled datatypes 2015-09-08 08:01:51 -04:00
jamesagnew 9af3fcf02d Allow browser requetsts to force a raw response 2015-09-07 21:52:35 -04:00
jamesagnew 08633066c6 Fix #216 - Unexpected attributes when parsing composite elements should be logged 2015-09-07 10:08:11 -04:00
James Agnew abdfb50b40 Fix a few tests and don't crash on old Woodstox 2015-09-04 13:59:57 -04:00
jamesagnew 68cc2f0cfe Fix tests 2015-09-04 09:00:55 -04:00
jamesagnew f3e44eea3b Merge branch 'master' of github.com:jamesagnew/hapi-fhir 2015-09-03 08:08:13 -04:00
jamesagnew 8b20f3a77d Sync to 1.0.0 FHIR definitions 2015-09-03 08:07:43 -04:00
James Agnew ae177b52e8 Populate Bundle.entry.fullUrl 2015-09-02 13:42:59 -04:00
jamesagnew 64cc5d4659 Bump FHIR version to 1.0.0 2015-09-01 08:56:07 -04:00
jamesagnew a9f978a8a2 Udate to latest DSTU2 definitions 2015-08-31 08:20:24 -04:00
James Agnew 110abf7cb2 Switch from Cobertura to JaCoCo 2015-08-28 17:06:56 -04:00
James Agnew 11c5ab7892 More auto qualify resource references 2015-08-24 18:33:28 -04:00
James Agnew 83a57f8e7c Auto qualify resource IDs 2015-08-24 18:21:34 -04:00
James Agnew df4d371edc Add profile and security params for generic search 2015-08-24 15:23:28 -04:00
jamesagnew 11376024fa Fixing test related to summary and elements mode 2015-08-23 21:51:46 -04:00
jamesagnew 44ac164eca Work on #125 - Support _summary and _elements 2015-08-23 13:29:57 -04:00
James Agnew 11f5aeebd9 Clean up the build and hopefully close #206 2015-08-19 11:49:00 -04:00
jamesagnew 6941f92090 Fix #207 - Confusing error message parsing invalid contained resources 2015-08-17 20:46:56 -04:00
James Agnew c2fba2ce21 More work on interceptors 2015-08-17 18:35:51 -04:00
jamesagnew 330dbde983 Add new interceptor hook for auditing 2015-08-16 22:09:01 -04:00
James Agnew 89a7750bf4 Start working on action interceptor framework 2015-08-14 17:05:07 -04:00
James Agnew 77f151901a Get coded valuesets working once again for DSTU2 resoruces 2015-08-13 17:58:31 -04:00
James Agnew 2766af2693 Update definitions and correctly handle exceptions in 
incomingRequestPreProcessed method in server interceptors
 2015-08-13 16:59:10 -04:00
James Agnew 24634880db Update for QA version of DSTU2 2015-08-09 11:18:04 -04:00
James Agnew b36e4e5841 Merge branch 'master' into dstu2_final 2015-08-06 18:07:34 -04:00
James Agnew c838d651dd Fix fluent client search call so that it can be mocked with Mockito 2015-08-06 18:06:32 -04:00
James Agnew 76c076a2d1 Add test for #205 2015-08-06 11:14:52 -04:00
jamesagnew e457366ffa Start work on upgrading DSTU2 to QA version 2015-07-25 11:56:47 -04:00
James Agnew 11f031d052 Add contributed test 2015-07-21 11:33:36 -04:00
James Agnew 56a4c1b04b Add serialization support and fix build regression 2015-07-21 09:45:53 -04:00
jamesagnew 99e92d8fca Operations in server generated conformance statement should only appear once per name, since the name needs to be unique. 2015-07-19 19:17:39 -04:00
jamesagnew a774a654ce Property document OperationDefinitions generated automatically by server 2015-07-19 11:10:46 -04:00
jamesagnew 61cb60b293 Operations which are not resource type specific were not showing up in REST server's conformance 2015-07-18 18:44:46 -04:00
jamesagnew a35d20b999 Fix #158 - Don't encode empty tags 2015-07-18 17:35:54 -04:00
jamesagnew 3bff020c54 Add exception pre processing method to server interceptors 2015-07-18 16:31:32 -04:00
jamesagnew 57ee1fe220 Fix unit tests failing due to OperationDefinition changes 2015-07-18 14:43:59 -04:00
jamesagnew 41283d4ed4 Add $get-resource-counts operation to JPA server 2015-07-17 18:28:47 -04:00
jamesagnew 2fc0d4c7a2 Clean up exception handling in server, and add QuestionnaireAnswers validation for JPA server 2015-07-16 20:16:51 -04:00
James Agnew 901c5c29cf Version bunp for 1.2 2015-07-14 18:08:06 -04:00
James Agnew 3fa7c54526 Tag 1.1 release 2015-07-13 10:31:02 -04:00
James Agnew 350028be73 Implement meta operations in client 2015-07-10 17:36:55 -04:00
James Agnew c22aa14d29 Clean up the validation framework and integrate the QuestionnaireAnswers 
validator
 2015-07-10 16:05:40 -04:00
James Agnew 0f76ba81e1 Fix #196 - Support deep chained parameters in JPA. Also add support for 
Prefer header.
 2015-07-07 10:41:07 -04:00
jamesagnew 8a86ad5e76 Wide sweeping changes to get RI structures working in server mode 2015-07-05 17:14:15 -04:00
jamesagnew 8b65a9aedf Indicate support for conditional create/update/delete in DSTU2 server conformance statement 2015-06-25 22:22:19 -04:00
jamesagnew 1b82b7df65 Tests for #191 2015-06-25 07:42:16 -04:00
jamesagnew fed9f4d61e Add unit tests and update healthconnex server 2015-06-23 08:29:13 -04:00
James Agnew 70d4abdf06 Server should include lastUpdated in search responses if one is supplied 
by the implementation. Also automatically include in this in JPA server
 2015-06-22 16:27:08 -04:00
jamesagnew 71fbfe5214 Add consolidated test package and clean up tests for cobertura 2015-06-20 14:23:34 -04:00
James Agnew e8c75c5a45 Add support for _lastUpdated parameter in client and JPA server 2015-06-19 17:46:14 -04:00
James Agnew 12f3cfcab8 Merge branch 'master' of github.com:jamesagnew/hapi-fhir 2015-06-18 17:49:54 -04:00
James Agnew 269106074d DSTU2 server should indicate conformance for transaction operation 2015-06-18 17:49:33 -04:00
jamesagnew d0cffbf8c7 Revert change to make IdDt#isLocal() return true if the base is "urn:". This caused all kinds of regressions and was obviously a bad idea. 2015-06-18 09:00:56 -04:00
James Agnew a27acb9b79 Merge branch 'master' of github.com:jamesagnew/hapi-fhir 2015-06-17 14:32:42 -04:00
James Agnew 39dd48bc41 Automatically populate Bundle.entry.base when encoding a bunde 2015-06-17 14:32:11 -04:00
jamesagnew 1bde9ac5b3 Fully implement content type negotiation, and add checkstyle 2015-06-17 13:51:05 -04:00
James Agnew 6f7ef96b97 Support $validate operation correctly in DSTU2 clients and in testpage 
overlay
 2015-06-16 11:56:30 -04:00
jamesagnew 81bfc28147 Support $validate operatioh in DSTU2 client 2015-06-16 08:05:27 -04:00
James Agnew 00af19cea7 Test updates 2015-06-12 18:25:14 -04:00
jamesagnew 0479a48a41 Correctly handle Bundle.entry.base 2015-06-12 08:27:03 -04:00
jamesagnew 4ab8871a41 POM cleanup 2015-06-09 08:22:46 -04:00
jamesagnew fc4d2ae7e2 Work on conformance generation for operations 2015-06-04 22:23:57 -04:00
James Agnew f9a9232926 Merge branch 'master' of github.com:jamesagnew/hapi-fhir 2015-06-04 12:20:17 -04:00
James Agnew 62b0707b36 Support attributes longer than 512kb. 2015-06-04 12:19:10 -04:00
James Agnew 9b97fb0e97 Enable validation ($validate) operation in DSTU2 style 2015-06-04 10:56:13 -04:00
jamesagnew 8c3c8e215f Fix #178 - Allow links in Bundle.entry when parsing old Bundle in DSTU2 mode 2015-06-04 08:19:17 -04:00
jamesagnew 064f113133 Clean up resource parameter handling 2015-05-31 19:38:01 -04:00
James Agnew 3280375486 Fix $everything operation in generic client if the server returns JSON 2015-05-29 17:50:18 -04:00
jamesagnew e22f52ca44 Add paging methods to generic client for DSTU2 bundle 2015-05-25 07:59:06 -04:00
James Agnew ff6884223e Fix #170 - Better addXXX methods in structures. Also don't incorrectly 
include IDs in client create requests, and add better getLink methods
to the bew Bundle resource structure.
 2015-05-21 15:18:46 -04:00
James Agnew 0f9d4b8059 Add interceptor for syntax highlighting 2015-05-15 18:59:54 -04:00
jamesagnew 54fdd44189 Fix locale dependent unit test 2015-05-10 21:16:31 -04:00
jamesagnew e9c09c6ba0 Encode meta element even if it only contains tags 2015-05-09 18:01:53 -04:00