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7701 Commits

Author SHA1 Message Date
Tadgh a1a3e65106 remove dead whitespace 2021-03-26 10:20:41 -04:00
Tadgh cc1861e876 Update test. 2021-03-25 15:48:03 -04:00
Tadgh 4d3b021f12 Add annotating processor and composite processor 2021-03-25 13:53:41 -04:00
Tadgh 315dc3fcb7 start with failing test 2021-03-24 12:50:29 -04:00
Tadgh 0aadcbdae7
Merge pull request #2497 from hapifhir/issue-2496-incorrect-error-on-custom-sp 
Fix bug with inconsistent error messages
 2021-03-24 10:09:40 -04:00
Tadgh 8785a51857 Remove janky interceptor hook 2021-03-23 19:50:05 -04:00
Tadgh a2ab3f5573 rethrow dataformatexception in case of TargetInvocationException 2021-03-23 19:49:06 -04:00
Tadgh 6f669f9ccd wip 2021-03-23 19:29:22 -04:00
Tadgh 8a8eb84fe6 Works on #2496, start with failing test 2021-03-23 18:14:06 -04:00
Kevin Dougan SmileCDR d1c2d839d1
2491 - Fix NullPointerException when performing cascade delete (#2492) 
* 2491 - Fix NullPointerException when performing cascade delete.
 2021-03-22 10:29:03 -04:00
James Agnew dc41d5ad61
Add terminology mapping and display population interceptors (#2488) 
* Start work on code mapping interceptors

* Work on generation

* Add terminology mapping and display population interceptors

* Add changelog

* License header updates

* Test fixes

* Fix typo

* Interceptor fixes

* License header update

* Test fixes

* Mapping fixes

* Version bump

* License header updates

* Add null tests

* Add null guard

* Intermittent fix
 2021-03-21 12:03:57 -04:00
michelgleeson 009f184ab4
fix refering to wrong view (#2486) 
Co-authored-by: Mike G <michel.gleeson@gmail.com>
 2021-03-18 17:47:46 -04:00
jamesagnew c9c13646f5 License header update 2021-03-18 10:42:46 -04:00
James Agnew d857048207
Preserve meta values in stored resources (#2481) 
* Fix #1731

* Test fix

* Test fixes

* Avoid intermittent failure
 2021-03-17 09:23:22 -04:00
Eric Prud'hommeaux d92a6787c5
- remove-JSON-round-trip-guard (#2472) 
hapi-fhir-structures-r4/.../RDFParserTest.java included a guard to NOT
report round-trip errors if JSON didn't round-trip due to changed
ordering of contained resources (and entries in Bundles). be50a46
appears to have fixed these issues so the guard is no longer
necessary.
 2021-03-17 05:51:29 -04:00
Kunjan Patel bdee1f1269
Update points.json for adding a point in atlas (#2482) 2021-03-17 05:50:07 -04:00
Tadgh b191f1da2b
Merge pull request #2480 from hapifhir/issue-2479-bad-packages 
Have CreatePackageCommand automatically add fhirVersions based on --fhir-version flag
 2021-03-16 18:00:27 -04:00
michelgleeson 0a6c61372c
Parameterize term valueset concept view dao (#2477) 
* Generic the list type to accomidate different substring queries

* special subquery for Oracle

* change the conceptview dao depending on dialect

* address review comments

* remove generics

* no longer inherits

* copy paste from non Oracle version

* dang copy pasters

* changelog

Co-authored-by: Mike G <michel.gleeson@gmail.com>
 2021-03-16 16:26:19 -04:00
Tadgh 30a37a40d5 Fix other broken test 2021-03-16 15:50:59 -04:00
jamesagnew 72026811e6 Add passing test for #2015 2021-03-16 14:44:29 -04:00
Nick Goupinets c7e8342c29
Merge pull request #2459 from hapifhir/ng_validation_s13n_interceptors 
Interceptors to handle standardization, normalization and address and field-level validation.
 2021-03-16 14:38:36 -04:00
Tadgh c3e6de3aff Add changelog 2021-03-16 13:47:29 -04:00
Tadgh fb36294330 Add fhirVersions to package creator, auto-selected by --fhir-version 2021-03-16 13:43:35 -04:00
Nick Goupinets b51f9b4261 Updated init param type 2021-03-16 13:13:23 -04:00
Nick Goupinets d80a9ed848 Fixed test bug 2021-03-16 11:37:49 -04:00
Nick Goupinets f9f703abe2 Added support for additional types 2021-03-16 11:14:40 -04:00
Nick Goupinets ef97eb22fb Merge branch 'master' into ng_validation_s13n_interceptors 2021-03-16 09:08:13 -04:00
jamesagnew beecb49d45 Add test 2021-03-16 08:34:43 -04:00
Nick Goupinets 83acb66675 Touch for a rebuild 2021-03-15 16:16:59 -04:00
Nick Goupinets 744adb2d08 Merge branch 'master' into ng_validation_s13n_interceptors 2021-03-15 10:32:04 -04:00
Nick Goupinets 04a0ecfc2b Added tests 2021-03-15 10:31:38 -04:00
jamesagnew 14f12e7dab Missed commit for #2471 2021-03-15 08:52:46 -04:00
James Agnew 3a8881f913
Resolve NPE in group bulk export (#2476) 2021-03-14 13:12:58 -04:00
jamesagnew f2baf9b8dc Don't corrupt stdout on unit tests 2021-03-13 18:41:31 -05:00
James Agnew 2e7eb972ff
Avoid NPE in ResourceVersionConflictResolutionStrategy for system request (#2471) 
* Avoid NPE in ResourceVersionConflictResolutionStrategy for system
request

* Add changelog
 2021-03-12 19:23:49 -05:00
Nick Goupinets 8c80e0838d Fixing line break problem 2021-03-12 17:48:17 -05:00
Nick Goupinets e188a95d66 Merge branch 'master' into ng_validation_s13n_interceptors 2021-03-12 16:17:25 -05:00
James Agnew 0ad57c51bb
Fix resource reindexing on partitioned seerver (#2468) 
* Fix resource reindexing on partitioned seerver

* Add changelog

* Test fix

* Test fix

* Tets fix

* Test fix
 2021-03-12 14:14:39 -05:00
Nick Goupinets 899bef0c39 Headers 2021-03-12 11:19:14 -05:00
Nick Goupinets f9f0b2705d Merge branch 'master' into ng_validation_s13n_interceptors 2021-03-12 10:30:36 -05:00
Nick Goupinets d68ee68b5d Added test 2021-03-12 10:30:12 -05:00
Nick Goupinets efae1b5e5f Added test 2021-03-11 17:44:34 -05:00
Nick Goupinets 8b8bbcc91f Refactored based on the code review 2021-03-11 17:14:01 -05:00
Nick Goupinets 0013910c53 Removed commented code 2021-03-11 15:48:22 -05:00
Nick Goupinets 01b1210b8a Fixed NPEs on validation 2021-03-11 15:38:45 -05:00
Nick Goupinets 23f3cc1f42 Code review 2021-03-11 14:51:13 -05:00
James Agnew 2633cbd141
Improve error message for invalid date param (#2466) 
* Improve error message for invalid date param

* Add changelog

* Test fixes
 2021-03-11 14:23:02 -05:00
Tadgh 950e65dc48
Merge pull request #2463 from hapifhir/issue-2445-support-patient-level-export 
Issue 2445 support patient level export
 2021-03-11 13:20:44 -05:00
Nick Goupinets 97fc19b2ce
Update hapi-fhir-base/src/main/java/ca/uhn/fhir/util/TerserUtil.java 
Co-authored-by: Tadgh <tadgh@cs.toronto.edu>
 2021-03-11 12:12:12 -05:00
Nick Goupinets e4387ea633
Update hapi-fhir-base/src/main/java/ca/uhn/fhir/util/TerserUtil.java 
Co-authored-by: Tadgh <tadgh@cs.toronto.edu>
 2021-03-11 12:12:06 -05:00