b2e2f165d8
Merge branch 'rel_6_4' into nd-4123-bulk-export-stuck-in-finalize-state
2023-02-10 07:58:01 -05:00
03ccf3e3d3
Better error handling for when channel type is not supported ( #4538 )
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Co-authored-by: kylejule <kyle.jule@smilecdr.com>
2023-02-09 21:49:44 -08:00
830c57f580
Merge branch 'rel_6_4' into nd-4123-bulk-export-stuck-in-finalize-state
2023-02-09 17:47:40 -05:00
c387259f82
Revert "fixes a regression caused my change in hapi-fhir"
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This reverts commit 4b58013149
2023-02-09 17:46:22 -05:00
e99aebd2ca
Revert "fixed the issue of meta.source field inconsistently populated in subscription messages for different requests ( #4524 )" ( #4535 )
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This reverts commit 53252b8d15
2023-02-09 14:33:53 -08:00
ee8941872c
timeout
2023-02-09 15:37:26 -05:00
f3847b1d0b
fixed channel import null pointer exception from null header ( #4534 )
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* retryCount 0 on null header + test + changelog
* suggested changes
2023-02-09 11:49:54 -08:00
fe078c2884
4441 rel 6 4 bad references creation bug ( #4519 )
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* adding a test
* fail in the case of ref enforce on type and on write and autocreate are all true
* update to code
* removing a line
* cleanup
* removing check on urn
* changing just to trigger a build
* adding a comment to the pom
* updating test for better information
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Co-authored-by: leif stawnyczy <leifstawnyczy@leifs-mbp.home>
2023-02-09 14:48:59 -05:00
4b58013149
fixes a regression caused my change in hapi-fhir
2023-02-09 14:09:25 -05:00
1da5e02b92
Merge branch 'rel_6_4' into nd-4123-bulk-export-stuck-in-finalize-state
2023-02-09 10:49:29 -05:00
53252b8d15
fixed the issue of meta.source field inconsistently populated in subscription messages for different requests ( #4524 )
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* fix + test
* minor fix
* Addressing suggestion
* Minor changes
2023-02-09 10:48:55 -05:00
2b76399aee
move test location
2023-02-09 10:44:14 -05:00
3d9a318e33
Making narrative_generation.md reference an html snippet ( #4531 )
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Co-authored-by: peartree <etienne.poirier@smilecdr.com>
2023-02-09 09:47:14 -05:00
4826cf0795
logging
2023-02-09 03:52:16 -05:00
d81b4ba852
shorten tests
2023-02-08 20:34:45 -05:00
4d57a47b52
Merge branch 'rel_6_4' into nd-4123-bulk-export-stuck-in-finalize-state
2023-02-08 19:26:51 -05:00
b4778f4b24
fix build ( #4530 )
2023-02-08 19:25:05 -05:00
8b4fab3424
Merge branch 'rel_6_4' into nd-4123-bulk-export-stuck-in-finalize-state
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# Conflicts:
# hapi-fhir-storage-batch2/src/main/java/ca/uhn/fhir/batch2/coordinator/WorkChannelMessageHandler.java
2023-02-08 17:12:14 -05:00
6b3b954c77
trying to fix BulkDataExportTest testGroupBulkExportNotInGroup_DoesNo… ( #4527 )
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* trying to fix BulkDataExportTest testGroupBulkExportNotInGroup_DoesNotShowUp
* added change log
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Co-authored-by: leif stawnyczy <leifstawnyczy@leifs-mbp.home>
2023-02-08 16:54:25 -05:00
5840566d41
trying to fix BulkDataExportTest testGroupBulkExportNotInGroup_DoesNotShowUp
2023-02-08 15:46:14 -05:00
1e8a7977b5
Merge branch 'rel_6_4' into nd-4123-bulk-export-stuck-in-finalize-state
2023-02-08 15:44:46 -05:00
e834721ef0
test
2023-02-08 15:43:07 -05:00
795b7ada5d
Revert "maintenance pass"
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This reverts commit bbc7418d51
2023-02-08 15:42:35 -05:00
1c40cd78e1
Revert "add logging"
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This reverts commit b0453fd953
2023-02-08 15:42:28 -05:00
71ea1b49f2
REVERT: change to operationoutcome.html
2023-02-08 12:04:23 -08:00
b0453fd953
add logging
2023-02-08 12:39:09 -05:00
f32157319c
changed what score is set for mdmlinks that created new golden resource ( #4514 )
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* changed what score is set for mdmlinks that created new golden resource
* fix test
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Co-authored-by: Long Ma <long@smilecdr.com>
2023-02-08 09:45:59 -07:00
697bd27799
Update to documentation regarding narrative generation; ( #4521 )
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Providing changelog;
Co-authored-by: peartree <etienne.poirier@smilecdr.com>
2023-02-08 08:47:13 -05:00
bbc7418d51
maintenance pass
2023-02-08 02:19:34 -05:00
70f49a2e6f
shorten test
2023-02-08 01:01:16 -05:00
1e7a96a0fb
Merge branch 'rel_6_4' into nd-4123-bulk-export-stuck-in-finalize-state
2023-02-07 23:46:15 -05:00
e724040c14
New line::
2023-02-07 17:22:36 -08:00
a4068b40ca
Increase timeout limit to match BulkExportUseCaseTest
2023-02-07 18:51:13 -05:00
0ee3434669
version bump
2023-02-07 17:27:31 -05:00
1f66d87b2f
code review comments
2023-02-07 17:21:33 -05:00
1280367593
Merge branch 'rel_6_4' into nd-4123-bulk-export-stuck-in-finalize-state
2023-02-07 17:18:50 -05:00
85ecbf181e
Unable to Expunge CodeSystem ( #4507 )
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* changes for GL-3943
* changes for GL-3943
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Co-authored-by: isaacwen <isaac.wen@smilecdr.com>
2023-02-07 15:26:10 -05:00
ca21abf0f8
4516 create hapi fhir cli command to clear stale lock entries ( #4517 )
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* Initial implementation
* better tests
* Add changelog and docs
* Forgotten files
* Code review comments
* Fix checkstyle
2023-02-07 11:37:52 -08:00
d08995a5e6
Add check in scanner ( #4518 )
2023-02-07 10:13:29 -08:00
7da52ef537
clean up
2023-02-07 10:33:08 -05:00
34e27c4313
decrease test time
2023-02-06 22:57:42 -05:00
43b3dd468a
tweak
2023-02-06 22:03:50 -05:00
19128fcd0d
tweak
2023-02-06 21:17:52 -05:00
6ca50687b4
add method to IJobPersistence to use a Stream
2023-02-06 20:39:42 -05:00
e160325af6
CVE resolutions ( #4513 )
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* Bump Postgres for CVE
* Bump jetty
* Verison bump
* Remove comments
* Revrt bump
2023-02-06 13:44:52 -08:00
33f6ed3d32
Change bulk import test for valueUri type ( #4503 )
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* change tests
* suggested test change
2023-02-06 09:19:21 -08:00
2a963acde2
Scheduled batch 2 bulk export job and binary delete ( #4492 )
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* First commit: Scheduled batch 2 bulk export job delete and binary, incomplete mock-based unit test, and a mess of TODOs and code that needs to be deleted.
* Refine solution and add a concrete unit test but still work to do.
* Comment out code in cancelAndPurgeAllJobs() and see if it breaks the pipeline.
* Unit tests complete. New Msg code for new IJobPersistence.fetchInstances() method. Cleanup TODOs and add others.
* Finish final touches on implementation.
* Add changelog.
* Various cleanup.
* Code review feedback.
* Small tweak to changelog.
* Last code review tweak.
* Address more code review comments.
* Reverse changes to consider work chunks. Add a constant for write-to-binary.
2023-02-06 09:04:04 -05:00
22c05268c2
tweak
2023-02-05 20:55:31 -05:00
2cbea97ed0
fix + changelog
2023-02-05 13:02:26 -05:00
87df691fc2
Merge branch 'rel_6_4' into nd-4123-bulk-export-stuck-in-finalize-state
2023-02-03 23:31:37 -05:00
nathaniel.doef
KGJ-software
Tadgh
samguntersmilecdr
TipzCM
Qingyixia
Etienne Poirier
Nathan Doef
leif stawnyczy
longma1
Isaac Wen
Luke deGruchy