* Start work on bul;k import
* Work on bulk import
* Have batch working
* Working
* Working
* More work
* More work on bulk export
* Address fixmes
* License header updates
* Test fixes
* License header updates
* Test fix
* Test fix
* Version bumps
* Work on config
* Test cleanup
* One more version bump
* Version bump
* CLeanup
* A few additions
* Test fixes
* Test fix
* Test fix
* Migration fix
* Test fix
* Test fix
* Search param service cleanup
* Work on collapsing search param
* Search param cleanup
* Work on build
* Test fix
* Test fixes
* Ongoing work
* Test fix
* Compile fix
* Test fixes
* Test fix
* Test fix
* License header updates
* Remove fixme
* Cleanup
* Cleanup
* Bump jaxb-runtime from 2.3.1 to 3.0.0
Bumps jaxb-runtime from 2.3.1 to 3.0.0.
Signed-off-by: dependabot[bot] <support@github.com>
* Bump jaxb-runtime from 2.3.1 to 3.0.0
Bumps jaxb-runtime from 2.3.1 to 3.0.0.
Signed-off-by: dependabot[bot] <support@github.com>
* Add jakarta bindings
* Dependency cleanup
* More depndency cleanup
* Work on deps
* Replace transaction annotation
* Cleanup
* Another fix
* Build fix
Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>
Co-authored-by: jamesagnew <jamesagnew@gmail.com>
* Work on junit
* Work on junit 5
* Work on junit 5
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* Work on tests
* Junit 5 tweaks
* Fixes
* Work on tests
* Work on junit5
* Work on tests
* Test fixes
* Work on junit5
* Test work
* Get junit5 working
* Test fix
* Work on tests
* WOrk on tests
* Work on tests
* fixes
* Compile fix
* One more tweak
* Compile fix
* Add changelog
* Fix compile error
* Compile fix
* [dev] Integration of a Jackson serializer and deserializer - first stage
* [fix] Fixed some serializing issues
[improve] Improved the processing, removed the loggers
* [clean] Removed the JacksonSerializer class, replaced all the Gson classes with Jackson classes
* [clean] Small cleanup
* [improve] Throw a ConfigurationException if the JsonGenerator cannot be created
* [improve] Use the ObjectMapper's `readTree` instead of `readValue`
* [dev] Latest fixes and improvements
* [dev] Use the Jackson serializer
* [clean] Removed the ObjectMapper configuration, for now
* [fix] Use the GsonStructure also for the parsing of a FHIR resource
* [clean] Removed the LinkedList usage
* Work on preparing for merge of #1673
* Resolve build errors
* Work on parser integration
* Tests passing
* Resolve fixme
* CLeanup
* Fix dependency
Co-authored-by: Bogdan Solga <bogdan.solga@gmail.com>
* Validation enhancements
* Work on validation api reworking
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* FIxes
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* Work on validation API
* Tests passing!
* More cleanup
* More validation API changes
* Fix intermittent test failure
* Package reorg
* Validation API work
* Work on doocumentation
* Work on API
* More work on new validation API
* Fix errorprone-reported error
* Test fixes
* Documentation updates
* Documentation tweaks
* Work on API
* Bean name adjustments
* Build fixes
* Some test fixes
* Some CI surefire improvements
* Build tweak
* More tweak
* Update azure-pipelines.yml for Azure Pipelines
* Update azure-pipelines.yml for Azure Pipelines
* One more CI attempt
* Update azure-pipelines.yml for Azure Pipelines
* Tweak command line
* Another build test fixc
* More build cleanup
* Add some logging
* Add more test logging
* Work on some test logging
* Fix compile error
* Work on codecov
* Work on codecov
* Remove test debug messages
* Start work on changing over
* Update tests
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* Work on generalizing binary access provider a bit
* Add expunge capability to binary storage, and also support actual binary
resources
* Work on binary provider
* Get the DB bound binary storage service working
* Test fixes
* Compile fix
* Fix compile error
* Test fix
* Test tweak
* Trying to figure out an intermittent failure
* Work on tests
* More work on tests
* Another test fix
* Ongoing work on core structures suport
* Ongoing work on this merge
* Ongoing work to clean up structures
* Credit for #1179
* Address compile issues
* Latest changes
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* Add H2 to migrator
* Test fix
* Initial consent svc
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* Add docs
* Ongoing consent service work
* Work on consent service
* More work on consent svc
* License header updates
* Ongoing consent svc work
* Some test fixes
* Some test fixes
* More work on consent svc
* Tests working
* Test fix
* Propagate RequestDetails to everything in JPA server
* More interceptor tweaks
* Fix compile error
* One more tweak to captured SQL
* Ongoing interceptor tweaks
* Ongoing interceptor tweaks
* More interceptor tweaks
* Interceptor tweaks
* Tweaks to tests
* Fix tests
* Test fix
* Raise warnings when encoding extensions with missing values
* Consent service work
* More interceptor tweaks
* Consent interceptor tweaks
* Add logging to test
* Starting work on this
* Working on narrative templates
* Work on new narrative system
* Account for some failing tests due to refactoring of narrative mode
* Another test fix
* More test fixes
* One more test fix
* Work on searches
* Address review comments
* Replace phloc with ph
* Enable schematron tests
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* Work on getting tests passing
* Another test fix
* Fix up transaction handling for DSTU2
* Add changelog
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* Dont use readonly
* One more test fix
* Update to snapshow build
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Squashed commit of the following:
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Author: James <jamesagnew@gmail.com>
Date: Sun Aug 13 14:38:51 2017 -0400
Minimize validation resources
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Merge: 3b80779fd31e158311d8
Author: James <jamesagnew@gmail.com>
Date: Sun Aug 13 14:05:34 2017 -0400
Forward port fix for #710
Merge branch 'master' into hapi3_refactor
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Merge: 1f534985e8356d9acaf7
Author: James <jamesagnew@gmail.com>
Date: Sun Aug 13 12:31:09 2017 -0400
Forward port #705, #708, and #710
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Date: Sun Aug 13 10:52:59 2017 -0400
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Merge: e0ffb84d216efafe62f1
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Date: Sun Aug 13 09:53:17 2017 -0400
Forward port #688
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Merge: 52388c11c1d19b00ff09
Author: James <jamesagnew@gmail.com>
Date: Sat Aug 12 14:59:46 2017 -0400
Merge branch 'master' into hapi3_refactor
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Author: James <jamesagnew@gmail.com>
Date: Sat Aug 12 06:21:46 2017 -0400
Cleanup
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Author: James <jamesagnew@gmail.com>
Date: Thu Aug 10 11:18:19 2017 -0400
Fix tests
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Author: James <jamesagnew@gmail.com>
Date: Sat Aug 5 06:55:50 2017 -0400
Fix a potential deadlock
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Author: James <jamesagnew@gmail.com>
Date: Sat Aug 5 06:22:06 2017 -0400
Add R4 code to CLI
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Author: James Agnew <jamesagnew@gmail.com>
Date: Thu Aug 3 06:14:01 2017 -0400
More cleanup
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Author: James <jamesagnew@gmail.com>
Date: Wed Aug 2 11:27:43 2017 -0400
Tests are working!
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Author: James Agnew <jamesagnew@gmail.com>
Date: Wed Aug 2 10:42:04 2017 -0400
Connection handling cleanup for new tests
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Author: James Agnew <jamesagnew@gmail.com>
Date: Wed Aug 2 10:16:28 2017 -0400
Clean up R4 JPA tests
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Author: James <jamesagnew@gmail.com>
Date: Wed Aug 2 09:12:38 2017 -0400
Work on R4 for JPA server
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More work on porting tests
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Author: James <jamesagnew@gmail.com>
Date: Tue Aug 1 07:09:29 2017 -0400
Work on porting DSTU1 tests
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Author: James Agnew <jamesagnew@gmail.com>
Date: Mon Jul 31 22:34:08 2017 -0400
More work on bring unit tests up to date
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Author: James Agnew <jamesagnew@gmail.com>
Date: Mon Jul 31 17:36:38 2017 -0400
Credit for #686 and forward port the fix to R4 validator
commit 96543c3992
Merge: 3fb75aa61a9901b802c4
Author: James Agnew <jamesagnew@gmail.com>
Date: Mon Jul 31 17:12:33 2017 -0400
Merge branch 'master' into hapi3_refactor
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Author: James <jamesagnew@gmail.com>
Date: Mon Jul 31 15:21:30 2017 -0400
More work on cleanup
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Author: James Agnew <jamesagnew@gmail.com>
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Work on porting STU1 tests
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Author: James Agnew <jamesagnew@gmail.com>
Date: Sun Jul 30 20:56:10 2017 -0400
Try to get coverage report working
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Author: James Agnew <jamesagnew@gmail.com>
Date: Sun Jul 30 20:27:02 2017 -0400
Fix android tests
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Date: Sun Jul 30 19:31:18 2017 -0400
More work on getting legacy code cleaned up
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Author: James <jamesagnew@gmail.com>
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Continue work on removing deprecated API
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Author: James Agnew <jamesagnew@gmail.com>
Date: Sun Jul 30 17:10:01 2017 -0400
More cleanup of legacy code
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Author: James <jamesagnew@gmail.com>
Date: Sun Jul 30 07:11:45 2017 -0400
More cleanup of legacy code
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Date: Sun Jul 30 06:43:25 2017 -0400
More work on removing legacy code
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Author: James <jamesagnew@gmail.com>
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Remove DSTU1 Bundle
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Author: James <jamesagnew@gmail.com>
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Now compiling
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Merge: c3ddf04e25cb2cea54d7
Author: James Agnew <jamesagnew@gmail.com>
Date: Fri Jul 28 06:21:02 2017 -0400
Merge branch 'master' into hapi3_refactor
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Author: James <jamesagnew@gmail.com>
Date: Thu Jul 27 11:06:06 2017 -0400
Sync R4 releases in
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Author: James <jamesagnew@gmail.com>
Date: Fri Jul 14 05:52:33 2017 -0400
JPA server is now able to handle placeholder IDs (e.g. urn:uuid:00....000) being used in Bundle.entry.request.url as a part of the conditional URL within transactions.
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Author: James Agnew <jamesagnew@gmail.com>
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Fix imports
commit a92ace2e0d
Merge: 3196db96d11a6b3ea867
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Date: Thu Jul 13 12:02:27 2017 -0400
Merge branch 'master' into hapi3_refactor
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Don't add false paging link to request
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Finally building correctly!
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Work on refactor
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Keep working on refactor
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Lots of work on refactor
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Date: Thu Jul 6 21:43:57 2017 -0400
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Date: Thu Jul 6 21:43:49 2017 -0400
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Keep working on refactor
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Merge branch 'master' into hapi3_refactor
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Lots of work on refactoring
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More work on bringing structs up to date
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Date: Tue Apr 18 07:12:45 2017 -0400
Working
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Updates to STU3
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Fix regression caused by #610
Squashed commit of the following:
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Date: Fri Mar 17 21:05:22 2017 -0400
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Site updates
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STU3 structs working!
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Format test
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Latest fixes
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STU3 structs passing
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Fix test
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Resolve compile issues in STU3
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FIx compilation error
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Another STU3 struct fix
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Work on STU3 structs
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Fix some tests
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Work on STU3 structs
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Work on DSTU3 structures
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Date: Tue Mar 7 21:03:14 2017 -0500
Work up upgrading structs
James Agnew
Diederik Muylwyk
dependabot[bot]
Ken Stevens
Bill Denton
Tadgh
Stig Rohde Døssing
David Gileadi
patrick-werner
jpoth
Clayton Bodendein
michael.i.calderero
christian ohr
sekaijin
Sebastien Riviere