Commit Graph

969 Commits

Author SHA1 Message Date
katie_smilecdr 2489702ab9 [3020] add documentation for $partition-management-read-partition 2021-09-22 16:08:11 -04:00
Jason Roberts e52d11b5ba search narrowing interceptor responds with 403 Forbidden instead of creating an impossible query 2021-09-22 14:00:12 -04:00
Jimmy Deng 26ac649946 changelog 2021-09-22 11:11:10 -04:00
Jimmy Deng 9a18422173 fix review 2021-09-22 11:09:50 -04:00
Tadgh b8ef2f6763 Add changes 2021-09-21 15:25:46 -04:00
James Agnew 7379dee3d8
Merge branch 'master' into add-device-to-patient-compartment 2021-09-21 14:38:39 -04:00
JasonRoberts-smile 645386c999
Apply suggestions from code review
Co-authored-by: Ken Stevens <khstevens@gmail.com>
2021-09-21 12:26:21 -04:00
Jason Roberts fa96c5b8be Merge branch 'master' into jr-20210921-mssql-data-migration 2021-09-21 12:22:56 -04:00
Ken Stevens 060791aeb4
hapi-fhir-storage-api (#3006)
* rename hapi-fhir-jpaserver-migrate to hapi-fhir-sql-migrate and move hapi-tasks into jpaserver-persistence

* rename hapi-fhir-jpaserver-api to hapi-fhir-storage-api

* move bulk import apis

* create hapi-fhir-jpa

* create hapi-fhir-jpa

* move CircularQueueCaptureQueriesListener to japi-fhir-jpa

* move mdm logs to storage-api

* move gziputil to storage-api

* move quartz scheduling to hapi-fhir-jpa

* move default subscription channel factory to storage-api

* consolidated batch constants

* correct accidental Logs change

* remove dependency of cdr-api on cdr-persistence

* fix javadoc

* pom descriptions

* review feedback
2021-09-21 15:36:08 +00:00
Jason Roberts b6c8658f8c Fix MS SQLServer database migration 2021-09-21 10:42:59 -04:00
Johnson Lu f1f9c672ad
3110 zh disallow unknown extensions (#3009)
* Added allowKnownExtensionsOnly() method such which calls setAnyExtensionsAllowed() to set myAnyExtensionsAllowed to false and modified changelogs to add entry for this ticket.

* Modified docs to remove description for .allowAnyExtensions() and included it within a description for .allowKnownExtensionsOnly() and also added test for .allowKnownExtensionsOnly()

* refactored allowKnownExtensionsOnly() to rejectUnknownExtensions()
2021-09-20 15:40:56 -04:00
JasonRoberts-smile 624ad3fcab
Merge branch 'master' into jr-20210914-oidc-support-in-swagger 2021-09-17 17:09:19 -04:00
Tadgh 3b1bf7aa09
Merge branch 'master' into 2849_add_new_mdm_param 2021-09-17 13:27:09 -04:00
Jaison B 8bb9aca8df Merge branch 'master' into 2849_add_new_mdm_param 2021-09-17 10:18:24 -06:00
Jason Roberts cb374042f5 Merge branch 'jr-20210914-oidc-support-in-swagger' of github.com:hapifhir/hapi-fhir into jr-20210914-oidc-support-in-swagger 2021-09-17 11:42:34 -04:00
Jason Roberts a866feb730 changelog 2021-09-17 11:41:51 -04:00
jmarchionatto 115056800c
Merge branch 'master' into issue-2995-valuesetcomposeincludeversion-is-not-set-when-uploading-terminology 2021-09-17 11:32:18 -04:00
James Agnew a56c85f780
Eliminate Search Coordinator ThreadPool (#2991)
* Add test

* Remove search coordinator thread pool

* Add changelog

* Add docs

* Test fixes

* Test fixes

* Test fixes

* Test fix
2021-09-16 16:37:34 +00:00
juan.marchionatto 3d3bab5102 merge master into branch 2021-09-16 11:02:17 -04:00
Tadgh 5bbe69cd31 Move into data class 2021-09-15 21:17:03 -04:00
juan.marchionatto 2435d77089 Add changelog 2021-09-15 14:46:33 -04:00
Tadgh 9d982c5e08
Merge branch 'master' into conditional-bug 2021-09-14 08:51:58 -04:00
Tadgh 75a16f3b13 Add docs and changelog 2021-09-14 01:54:59 -04:00
Tadgh 3ccadd636e
Merge branch 'master' into 2958-consistent-error-handling 2021-09-13 19:38:57 -04:00
jamesagnew 67cf058318 Add changelog 2021-09-13 19:29:49 -04:00
Tadgh 4aa1329e11 Fix up changelog 2021-09-13 13:13:28 -04:00
James Agnew 5554431146
Avoid dead SearchParameter links in CapabilityStatement (#2790)
* Avoid dead SearchParameter links in CapabilityStatement

* Resolve fixmes

* Build fix

* Test fix

* Test fix

* Test fix

* Work on metadata

* Fixes

* Test fixes

* Test fix

* Test fix

* Test fixes

* Test fix

* Work on test fixes

* Test fixes

* Test fixes

* Test fixes

* Test fix

* Fix params

* Resolve fixme

* Adjust changelogs

* Version bump to 5.6.0-PRE7

* Add license header

* Bump version to 5.6.0-PRE5-SNAPSHOT
2021-09-11 18:27:18 -04:00
jdar8 a02a9e0254
Merge branch 'master' into 2958-consistent-error-handling 2021-09-10 17:02:31 -07:00
Justin Dar 77845d66f7 Improved code formatting 2021-09-10 10:54:33 -07:00
Tadgh 86ab77446e
Merge branch 'master' into 2975-attribution 2021-09-10 13:05:38 -04:00
katie_smilecdr ab3af7af2a Merge branch 'master' into 2973-CLI_option_help_fails 2021-09-10 11:54:37 -04:00
Tadgh 30834d13ad Add attribution. 2021-09-10 10:28:54 -04:00
Dušan Markovič d6d862015b Address concerns in review for issue 2975 2021-09-10 15:46:27 +02:00
katie_smilecdr 1af7ed6223 [2973] update changelog 2021-09-10 09:40:35 -04:00
Dušan Markovič 032a9155f0 Merge branch 'master' of https://github.com/hapifhir/hapi-fhir into issue_2975 2021-09-10 09:11:06 +02:00
Justin Dar 836948010f Fixes issue (#2958) where Procedure?patient caused inconsistent results and ensured that such requests gave http 400 2021-09-09 16:10:09 -07:00
Dušan Markovič ed325e9e11 Enable multiple hosts in ElasticsearchHibernatePropertiesBuilder 2021-09-10 00:14:21 +02:00
katie_smilecdr e6be758d65 Merge branch 'master' into 2973-CLI_option_help_fails 2021-09-09 17:15:20 -04:00
katie_smilecdr 10f0b0877c [2973] fix "help {command}" 2021-09-09 17:14:51 -04:00
Tadgh b3e24078ae Add changelog 2021-09-09 11:01:11 -04:00
Tadgh 0ccd71faf8
Merge pull request #2963 from hapifhir/custom-elastic-index
Custom elastic index
2021-09-08 14:29:58 -04:00
Tadgh fbf6b35d2e
Merge branch 'master' into custom-elastic-index 2021-09-08 08:49:26 -04:00
Tadgh f04cf02be7
Merge branch 'master' into issue-2901-npe-in-bundle-transaction 2021-09-08 08:45:47 -04:00
Jason Roberts 34075911ce Merge branch 'master' into jr-20210831-contained-chained-search 2021-09-07 17:28:24 -04:00
Jason Roberts d02e7e0041 changelog 2021-09-07 14:25:06 -04:00
Tadgh 3ec47cb0ba Bump version as we break the localcontainerentitymanagerfactory bean constructors args 2021-09-07 13:58:22 -04:00
Tadgh eabe3e7c74 Merge branch 'master' into custom-elastic-index 2021-09-07 13:56:44 -04:00
Tadgh ecd93c9e8a Add changelog 2021-09-07 13:54:28 -04:00
Nick Goupinets 35aaa98431 Merge branch 'master' into 2849_add_new_mdm_param 2021-09-07 11:27:49 -04:00
Ken Stevens 346e29920a
Issue 2927 convert mdm clear to spring batch (#2929)
* initial roughout of mdm clear batch job

* still roughing out classes

* finished first draft of reader

* most tests passing now

* all tests pass.  now FIXMEs

* FIXMEs done.  Time for regression.

* fix test

* changelog and docs

* fix test

* pre-review cleanup

* version bump

* move spring autowire deps for cdr

* move spring autowire deps for cdr

* finally got beans working phew

* rearrange method calls so persistence module can perform clear operation on its own

* Update hapi-fhir-docs/src/main/resources/ca/uhn/hapi/fhir/docs/server_jpa_mdm/mdm_operations.md

Co-authored-by: Tadgh <tadgh@cs.toronto.edu>

* review feedback

* review feedback

* Remove inheritance

* fix beans

Co-authored-by: Tadgh <tadgh@cs.toronto.edu>
Co-authored-by: Tadgh <garygrantgraham@gmail.com>
2021-09-03 14:58:19 -04:00
Nick Goupinets 1bd1b36668 Merge branch 'master' into 2849_add_new_mdm_param 2021-09-03 11:04:20 -04:00
Tadgh dc69bfc729 Add changelog 2021-09-02 23:07:07 -04:00
Nick Goupinets ee65a24260 Merge branch 'master' into 2849_add_new_mdm_param 2021-09-02 17:42:41 -04:00
Tadgh 26ff15f939
Revert "Fix search of :not modifier" 2021-09-02 14:33:30 -04:00
leif stawnyczy 1a7b101d03 Merge branch 'master' into issue-2901-npe-in-bundle-transaction 2021-09-02 10:13:04 -04:00
leif stawnyczy 4c90ffe975 issue-2901 adding changelog 2021-09-02 09:47:55 -04:00
leif stawnyczy 0286eb5278 issue-2901 updated some documentation and added support for autocreated placeholder / autoversioned references at paths when in transactios and have not been created yet 2021-09-02 09:15:39 -04:00
Tadgh feb34e9bf5
Merge branch 'master' into patch-2 2021-09-02 08:42:41 -04:00
Tadgh b1d192637d
Merge pull request #2928 from hapifhir/ft-search-with-not-modifier
Fix search of :not modifier
2021-09-02 08:41:16 -04:00
Sidharth Ramesh f5de2da6ba
Corrected typo in docs - Plain Providers
It was "plan providers" before
2021-09-02 14:52:38 +05:30
Tadgh 3e288f1dde Merge branch 'master' into rel_5_5_1 2021-09-01 18:16:27 -04:00
Tadgh ee956929f9
Merge branch 'master' into add-attribution-for-gotoguy 2021-09-01 16:42:19 -04:00
Tadgh ae2c752c55 Add attribution for 2793 2021-09-01 15:54:28 -04:00
katie_smilecdr 453ef7ec1c Merge branch 'master' into 2935_Search_with_trailing_percent_sign 2021-09-01 11:33:26 -04:00
Frank Tao 44b0d3e9e7
Fixed $lookup with displayLanguage caching issue (#2932)
* Fixed $lookup with displayLanguage caching issue

* Added changelog and optimized the test cases
2021-08-31 22:18:40 +00:00
katie_smilecdr a1fbeeacaa [2935] Escape "%" in like expression 2021-08-31 15:11:06 -04:00
Tadgh e1272a3825 Bump version of HAPI-FHIR 2021-08-31 11:43:17 -04:00
Tadgh 993b2a2f47 Backport changelog 2021-08-31 11:41:17 -04:00
Tadgh 7fc6a2f16b Add changelog 2021-08-31 11:39:01 -04:00
Tadgh cc2e968595 Add version.yaml 2021-08-31 11:04:20 -04:00
Tadgh 37c88392b4 Add changelog 2021-08-31 10:53:14 -04:00
Frank Tao 3c0a197407 Added changelog 2021-08-28 16:23:09 -04:00
Nick Goupinets 91a961f9fd Added changelog 2021-08-27 10:48:19 -04:00
Tadgh fd6dcf6363 Fix bug in code. Add test. Add changelog 2021-08-25 18:16:47 -04:00
Frank Tao 090a8b0821
Impl displayLanguage for $lookup (#2908)
* Impl displayLanguage for $lookup - first cut

* Added original lookupCode method

* Added original lookupCode method to IFhirResourceDaoCodeSystem

* Added more test cases and changelog
2021-08-25 14:47:10 -04:00
Tadgh d34b0ff093
Merge pull request #2914 from hapifhir/issue-2904-Swagger-ui-Doesn't-Work-with-Partitions
Issue 2904 swagger UI doesn't work with partitions
2021-08-24 17:43:46 -04:00
katie_smilecdr 1211600e25 [2904] update changelog file name 2021-08-24 11:54:41 -04:00
katie_smilecdr f8fa09ae8e [2904] add changelog 2021-08-23 16:39:52 -04:00
Tadgh 2fbe7d7443 Strip broken backport line 2021-08-23 16:39:19 -04:00
katie_smilecdr a0dd79f68e [2904] add changelog 2021-08-23 16:38:22 -04:00
Tadgh 37ad73a422 Bump PRE version so we don't conflict downstream 2021-08-23 15:42:18 -04:00
Tadgh 1acaf325c5 Merge branch 'master' into rel_5_5_0 2021-08-23 14:50:29 -04:00
Frank Tao 4c2ae513d8
Process bundle batch in parallel (#2905)
* Process batch in parallel

* Added a test case

* Added more test cases

* Default the bundle batch to single thread.

* Tried transaction before multi-thread.

* Updated the test cases

* Update based on review comments and add changelog

* Updated the changelog

* Restore QueueCapacity
2021-08-20 21:14:08 -04:00
jamesagnew bb0552d0db Changelog tweak 2021-08-19 12:59:51 -04:00
James Agnew 85517c47e2
Include includes on revincludes (#2902)
* Include includes on revincludes
2021-08-19 12:31:29 -04:00
markiantorno 367b338d85 Updating HAPI to use latest core lib changes. 2021-08-18 11:06:14 -04:00
katie_smilecdr 4baca0a282 [2883] Add changelog 2021-08-16 11:28:30 -04:00
Tadgh cf917d0f82 Version Bump 2021-08-15 16:54:38 -04:00
Tadgh 669cf05b30 Modify SearchParameterMap toNormalizedQueryString to include value of _contained parameter 2021-08-12 14:25:12 -04:00
Tadgh 41ec1e03c0
Merge pull request #2880 from hapifhir/weird-contained-issue
Contained Issue
2021-08-11 08:27:54 -04:00
Tadgh b34d569443 Fix changelog test 2021-08-10 22:22:57 -04:00
Tadgh 33fbffcff9 Bump issue number 2021-08-10 16:18:40 -04:00
Tadgh 6a46a68e82 Move file 2021-08-10 16:18:03 -04:00
Tadgh fe98162616 Add changelog 2021-08-10 14:59:03 -04:00
Tadgh 97f88202eb Fix Changelog typo 2021-08-10 08:12:54 -04:00
Tadgh 1dfaf73066 Merge branch 'master' into 2876-npe-mdm-resource-util 2021-08-09 19:21:58 -04:00
Tadgh bfd9dffdbe Allow jira field in changelog 2021-08-09 19:09:40 -04:00
Tadgh 416a52c679 Add changelog, fix code 2021-08-09 16:02:19 -04:00
VK-SMILECDR 1e0f843d6c
2852 - Simplify java mail code (#2874)
* testing

* [2852] adding SimpleJavaEmail

* [2852] refactor email sender code

* [2852] dependency cleanup

* [2852] add missing dependency

* [2852] add missing spring framework test dependency

* [2852] add change log

* [2852] add change log

* Update hapi-fhir-docs/src/main/resources/ca/uhn/hapi/fhir/changelog/5_5_0/2852-simplify-java-mail-code.yaml

Co-authored-by: Tadgh <tadgh@cs.toronto.edu>

* [2852] minor test code cleanup

* [2852] add more tests

Co-authored-by: Tadgh <tadgh@cs.toronto.edu>
2021-08-09 15:59:47 -04:00
Tadgh 4fadc62066 Bump Hapi Version 2021-08-06 13:44:04 -04:00
Tadgh 0a303a0e11 Add MDM expansion by golden pid 2021-08-06 13:22:08 -04:00
Kevin Dougan SmileCDR 35d3e3689b
2829 - Add DSTU3 Support To UploadTerminologyCommand (#2832) 2021-08-05 13:07:50 -04:00
juan.marchionatto 1ff1954cba Merge branch 'master' into issue-2786-upload-terminology-command-add-explicit-current-version-control 2021-07-30 11:20:23 -04:00
Ken Stevens f5dfc3a5ed
New reindex spring batch operation (#2845)
* first sweep to add new $reindex job

* first cut done.  next up integration test.

* start roughing out reindex everything

* Failing test

* test passes

* add BundleUtil helper method

* rough in processEverything

* rough in processEverything

* fix mock test

* merge master

* Make BaseJpaTest.mySrd lenient.

* fix test

* reindex everything works with FIXMEs

* reindex everything more tests

* moar tests

* moar tests

* fix test

* fix test

* fix regression and fix test

* fix test cycle

* fixme

* fix test

* test provider layer

* reindex everything partition aware

* yay last fixme!

* run reindex in partitioned threads

* add fixmes for areas that require extra testing

* added transaction and log message

* manual integration testing

* changelog

* reindex all partitions

* bump hapi version

* fix test

* moar test

* pre-review cleanup

* fix javadoc

* review feedback

* review feedback

* review feedback

* Update hapi-fhir-docs/src/main/resources/ca/uhn/hapi/fhir/changelog/5_5_0/2845-reindex-operation.yaml

Co-authored-by: michaelabuckley <michaelabuckley@gmail.com>

* review feedback

* review feedback

* Update hapi-fhir-jpaserver-base/src/test/java/ca/uhn/fhir/jpa/delete/job/ReindexJobTest.java

Co-authored-by: michaelabuckley <michaelabuckley@gmail.com>

* Update hapi-fhir-jpaserver-base/src/test/java/ca/uhn/fhir/jpa/delete/job/ReindexJobTest.java

Co-authored-by: michaelabuckley <michaelabuckley@gmail.com>

* Update hapi-fhir-jpaserver-base/src/test/java/ca/uhn/fhir/jpa/provider/r4/MultitenantBatchOperationR4Test.java

Co-authored-by: michaelabuckley <michaelabuckley@gmail.com>

* Update hapi-fhir-jpaserver-base/src/test/java/ca/uhn/fhir/jpa/provider/r4/MultitenantBatchOperationR4Test.java

Co-authored-by: michaelabuckley <michaelabuckley@gmail.com>

* Update hapi-fhir-jpaserver-searchparam/src/main/java/ca/uhn/fhir/jpa/searchparam/ResourceSearch.java

Co-authored-by: michaelabuckley <michaelabuckley@gmail.com>

* Update hapi-fhir-server/src/main/java/ca/uhn/fhir/rest/api/server/storage/IDeleteExpungeJobSubmitter.java

Co-authored-by: michaelabuckley <michaelabuckley@gmail.com>

Co-authored-by: michaelabuckley <michaelabuckley@gmail.com>
2021-07-29 19:18:49 -04:00
juan.marchionatto 264dfee099 Merge branch 'master' into issue-2786-upload-terminology-command-add-explicit-current-version-control 2021-07-29 16:21:56 -04:00
juan.marchionatto 1fcb36d84a Fix implementation to work also for use case where version is being updated.
Use property instead of parameter.
2021-07-29 15:54:00 -04:00
Tadgh e076b30eef bump Jetty for CVEs 2021-07-27 15:49:00 -04:00
James Agnew f957661dda
Patient ID Partition Mode should support conditional create (#2828)
* Fixes

* Test fix

* Add changelog

* Test fixes

* Test fixes

* Docs tweak

* Partitioning fixes

* Import fix

* Fix test data
2021-07-26 14:18:58 -04:00
Ken Stevens 6bbb403fd1
When Client Id Strategy is set to NOT_ALLOWED, permit system requests to create resources (#2827)
* resolved 2826

* fix regression
2021-07-23 19:10:19 -04:00
Ken Stevens 92ec113775
fixed bug (#2824) 2021-07-23 16:58:53 -04:00
Michael Buckley 2539f49662 Add detail to changelog 2021-07-23 15:07:36 -04:00
Michael Buckley d99f94e665 changelog 2021-07-23 15:00:48 -04:00
juan.marchionatto ad6f7a204c Fix changelog syntax. Merge current master. 2021-07-22 10:49:16 -04:00
juan.marchionatto ae0665131b Fix syntax. 2021-07-22 09:41:16 -04:00
jamesagnew a5e6674e84 Version bump to 5.5.0-PRE7-SNAPSHOT 2021-07-22 08:41:16 -04:00
IanMMarshall 8b8db82666
Enable Package Loader when partitioning is enabled with unnamed partitions (#2808)
* Enable Package Loader when partitioning is enabled with unnamed partitions.

* Enable Package Loader when partitioning is enabled with unnamed partitions.

* Additional package loading problems found with partitioning.

* Additional package loading problems found with partitioning.

Co-authored-by: ianmarshall <ian@simpatico.ai>
2021-07-22 05:17:17 -04:00
James Agnew 6af022062f
Fix issue with partitioning in patient ID compartment mode (#2810)
* Fix issue with partitioning in patient ID compartment mode

* Add changelog
2021-07-21 17:21:23 -04:00
juan.marchionatto e0e52c666c Add current-version parameter to upload-terminology command. 2021-07-21 16:18:35 -04:00
Michael Buckley cbb9a4355a Add details when we fail to load an element of a package definition. 2021-07-19 17:59:54 -04:00
Frank Tao 64f1643046
Added LOINC linguistic variants support (#2803)
* Added linguistic variants for LOINC uploader

* Using static class

* Added the changelog
2021-07-19 14:17:56 -04:00
Frank Tao 946080d709
Added ConsumerName to the loinc loader. (#2800)
* Added ConsumerName to the loinc loader.

* Added extra test for coverage

* Added the changelog for LOINC CONSUMER NAME support
2021-07-16 13:30:42 -04:00
James Agnew 0235296ba7
Add support for bulk export of multiple types (#2797)
* Add support for bulk export of multiple types

* Add changelog
2021-07-15 14:01:10 -04:00
Mad Mirrajabi 5f2a3af01e
Add Innovattic B.V. to HAPI FHIR Global Atlas (#2798) 2021-07-15 14:00:33 -04:00
Nick Goupinets 520cec1e15 Fixed link resolution 2021-07-14 11:30:09 -04:00
Tadgh 554685d142 Fix MDM documentation 2021-07-13 16:08:01 -04:00
Tadgh 0a27b08aad
Merge pull request #2783 from hapifhir/2777-hapi-fhir-cli-Add-option-to-pass-request-headers-to-target-server
Add changelog. Address MR comments.
2021-07-09 09:35:56 -04:00
Tadgh 218325b385
Add backport info for full diff between 5.4.1 and 5.4.2 (#2784) 2021-07-08 16:25:18 -04:00
juan.marchionatto 1e9163c636 Add changelog. Address MR comments. 2021-07-08 14:52:19 -04:00
James Agnew 95306c3d64
Add NPM validation support module (#2782)
* Add NPM validation support module

* Add changelog
2021-07-07 16:28:41 -04:00
Tadgh 3e7bc2a81e
Forward port 5 4 2 (#2781)
* Add new version to enum

* Add backport tags, new VersionEnum, and new release folder for 5.4.2
2021-07-07 10:10:07 -04:00
James Agnew d762a07817
Partition patient interceptor (#2766)
* Start work on interceptor

* Implemented

* Add interceptor and docs

* Add docs

* Compile fix

* Test fixes

* Test cleanup

* Test fixes

* Test fixes

* Improve error message

* Add broken tests

* Update hapi-fhir-docs/src/main/resources/ca/uhn/hapi/fhir/changelog/5_5_0/2766-add-patient-id-compartment-interceptor.yaml

Co-authored-by: Tadgh <tadgh@cs.toronto.edu>

* Update hapi-fhir-jpaserver-base/src/main/java/ca/uhn/fhir/jpa/interceptor/PatientIdPartitionInterceptor.java

Co-authored-by: Tadgh <tadgh@cs.toronto.edu>

* Address review comments

Co-authored-by: Tadgh <garygrantgraham@gmail.com>
Co-authored-by: Tadgh <tadgh@cs.toronto.edu>
2021-07-05 09:15:20 -04:00
Tadgh a4fb72975d
Merge pull request #2767 from hapifhir/2765-mdm-paging
Paging implementation for MDM query links operation
2021-07-01 23:16:47 -04:00
Tadgh 0a4a50f0a8 update docs 2021-07-01 17:05:14 -04:00
Ken Stevens b1334241c7
change out-of-order flag to switch-order flag so the default behaviour reverses (#2773)
* change out-of-order flag to switch-order flag so the default behaviour reverses

* change log
2021-07-01 15:17:39 -04:00
michaelabuckley 7aba83293a
Merge pull request #2771 from hapifhir/issue-2768-convert-mdm-submit-to-spring-batch
$mdm-submit operation was only submitting 100 resources ...
2021-06-30 16:14:01 -04:00
Tadgh f66f9b992e Bump pre-version as this will break downstream implementations 2021-06-30 15:37:19 -04:00
Tadgh f33696a165 Add changelog 2021-06-30 15:24:29 -04:00
Tadgh 883337a9f4 Tidying 2021-06-30 14:55:57 -04:00
Tadgh 91dee55279 Correct docs 2021-06-30 14:49:37 -04:00
Michael Buckley fa750d209e $mdm-submit operation was only submitting 100 resources and then stopping.
It now correctly submits all requested resources.
2021-06-30 14:48:28 -04:00
Tadgh 8f3cbb0a7f Refactor docs 2021-06-30 14:48:13 -04:00
Clark Van Oyen 4a1b836582
Add Cortico to HAPI FHIR Global Atlas (#2769)
Cortico uses HAPI FHIR to help medical providers engage seamlessly with patients over video, email and SMS.
2021-06-30 08:36:38 -04:00
Ken Stevens 795fb31a3a
fixed mdm rules (#2764)
* fixed mdm rules

* changelog

* review feedback jetbrains

* review feedback
2021-06-28 23:24:37 -04:00
Ken Stevens 9500a1a7de
fix false rule matches (#2762)
* fixed an issue with matching compartments to lists of ids

* change log

* Added extra guards against false rule matches.

* changelog

* fix inCompartment

* cleanup
2021-06-27 10:34:32 -04:00
Ken Stevens 5565bf9930
fixed an issue with matching compartments to lists of ids (#2761)
* fixed an issue with matching compartments to lists of ids

* change log
2021-06-26 20:24:28 -04:00
Ken Stevens ea98e62656
collapse multiple owners for same compartment into shared compartment (#2760)
* collapse multiple owners for same compartment into shared compartment

* changelog

* fix regression

* fix regression

* pre-review cleanup

* pre-review cleanup
2021-06-26 11:48:47 -04:00
michaelabuckley 110173dafb
Merge pull request #2757 from hapifhir/2091-MemoryCacheService-confused-expiry
Fix units on cache expiry
2021-06-25 14:29:43 -04:00
michaelabuckley f1b8802f45
Update hapi-fhir-docs/src/main/resources/ca/uhn/hapi/fhir/changelog/5_5_0/2758-fix-cache-expiry-units.yaml
Co-authored-by: Tadgh <tadgh@cs.toronto.edu>
2021-06-25 14:19:04 -04:00
James Agnew 7185089c9d
Add forced offset search JPA interceptor (#2756)
* Add support for offset searches

* Tests working

* Add changelog

* Test fixes

* Test fix

* More test fixes

* Add commit counter
2021-06-25 10:40:39 -04:00
Michael Buckley 1367e61c93 changelog 2021-06-24 19:13:54 -04:00