Commit Graph

824 Commits

Author SHA1 Message Date
jamesagnew c7798fee48 Test fix 2019-06-18 05:40:00 -04:00
Stig Rohde Døssing b56f59542a Move JettyUtil to new module 2019-06-14 18:34:45 -04:00
Stig Rohde Døssing aab7bb6b64 Issue-1325: Let OS assign random ports to servers during testing, and let tests get the port of the running server once the OS has assigned a port. Delete PortUtil and similar utilities. 2019-06-14 18:34:45 -04:00
James Agnew 50a8c66bf5 Version bump to 4.0.0-SNAPSHOT 2019-05-30 17:13:03 -04:00
jamesagnew 73aa53be8f Release 3.8.0 2019-05-30 16:50:04 -04:00
James Agnew 6b37525f2d
Clean up redundant dependencies (#1306)
* Remove a bunch of unneedd deps

* Test fix

* Disable useless test
2019-05-09 12:51:13 -04:00
James Agnew 738c2c1797
Interceptor framework refactoring (#1287)
Interceptor framework overhaul
2019-04-24 14:32:30 -04:00
James Agnew 00a8f8c759 Fix broken build 2019-03-12 13:13:13 -04:00
James Agnew 48c10bddc5
Narrative Generator refactoring (#1219)
* Starting work on this

* Working on narrative templates

* Work on new narrative system

* Account for some failing tests due to refactoring of narrative mode

* Another test fix

* More test fixes

* One more test fix

* Work on searches

* Address review comments
2019-02-27 14:59:57 -05:00
James Agnew 0f8c8d18e2 Bump version to 3.8.0-SNAPSHOT 2019-02-06 20:02:28 -05:00
jamesagnew 207015c3af Version bump to 3.7.0 2019-02-05 21:36:38 -05:00
James Agnew edb79b8c6a Updates to parser dont encode elements functionality 2019-02-04 16:34:05 -05:00
James Agnew e401ec86e4
Enhanced elements (#1192)
Squashed merge: Add elements exclude mode

* Start working on elements enhancement

* Work on elements projection

* Work on elements filter

* Feature is now working

* Just some cleanup

* Address compile issues
2019-02-03 16:41:33 -05:00
James Agnew b8f200f897 Correctly expose chains in DSTU2 server conformance statmeent 2019-01-10 06:15:31 -07:00
jamesagnew a8a97ae6b2 Two test fixes 2019-01-07 09:18:11 -05:00
jamesagnew 98d93df12a License header updates 2019-01-04 16:22:15 -05:00
James Agnew 1bfa29bbcc Site updates 2018-12-28 11:42:21 -05:00
James Agnew 9d3904ef3e Fix #1142 - Upgrade Spring Boot to latest version 2018-12-23 13:10:03 -05:00
James Agnew a0cb7edd08 Version bump a few dependencies 2018-12-22 20:13:03 -05:00
Corina Dalaban 3a3d503772 head operation should return 200OK response code instead of 400
BadRequest
2018-12-21 05:40:35 -05:00
jamesagnew 54bb1508db Changelog for #980 2018-12-20 06:08:10 -05:00
James Agnew b41c222880 Require explicit declaration of authorizationinterceptor operation rules
on whether the response is authorized or not
2018-11-23 14:25:46 -05:00
James Agnew 67dbc802be Better detection of binary content in ResponseHighlighterInterceptor 2018-11-18 14:32:54 +01:00
jamesagnew cc57bacab8 Version bump to 3.7.0-SNAPSHOT 2018-11-12 10:07:28 -05:00
James Agnew 63af04a7b4 Prepare for 3.6.0 release 2018-11-12 05:40:55 -05:00
James Agnew 01c7618867 Failing test cleanup 2018-11-08 15:46:49 -05:00
Diederik Muylwyk 21a0390e6e Even more additional work on FhirTerser.getValues(...) enhancements. Almost ready for review. 2018-10-24 11:43:19 -04:00
Diederik Muylwyk 688e159493 Additional work on FhirTerser.getValues(...) enhancements. 2018-10-22 18:22:03 -04:00
Diederik Muylwyk 225007d681 Completed work on FhirTerser.getValues(...) enhancements. 2018-10-19 18:24:26 -04:00
James Agnew 4e252063b8 Allow transactions and batches with transaction permission in
AuthorizationInterceptor
2018-10-16 19:54:55 -04:00
James Agnew 51a69f0dc9 Fixes to migrator and count logic 2018-10-13 12:02:19 -04:00
James Agnew 3e445faf47 Squashed commit of the following:
commit df641506885e09e63f80efc6c658d01a1a3a8142
Author: James Agnew <jamesagnew@gmail.com>
Date:   Sat Sep 29 13:47:22 2018 -0400

    Shrink validation resources

commit 4c1550eafa26f4235b4b8804741aecc03276b5c6
Author: James Agnew <jamesagnew@gmail.com>
Date:   Fri Sep 28 22:45:28 2018 -0400

    Updates to get R4 working

commit 8332f15291006691ed9b07ead3e3524b0fc85510
Author: jamesagnew <jamesagnew@gmail.com>
Date:   Fri Sep 28 09:02:13 2018 -0400

    Ongoing work on gettign R4 working

commit f7146cab7aed937bb625a8aec95744d76db00041
Author: James Agnew <jamesagnew@gmail.com>
Date:   Fri Sep 28 05:21:01 2018 -0400

    More work on sync

commit f48de4a10b1bab2584fee813017d9b27b237bfa9
Merge: 9e4f3cc722 aacb78b779
Author: James Agnew <jamesagnew@gmail.com>
Date:   Thu Sep 27 20:11:29 2018 -0400

    Merge branch 'sync_r4' of github.com:jamesagnew/hapi-fhir into sync_r4

commit 9e4f3cc722668aae31a77b19bf9b032af3ae01b0
Author: James Agnew <jamesagnew@gmail.com>
Date:   Thu Sep 27 20:11:19 2018 -0400

    Fix compile error

commit 7ec29e0ceda8f9013cbabb95767cbe15b4b81303
Merge: 23f7517325 002c4b3ff7
Author: James Agnew <jamesagnew@gmail.com>
Date:   Thu Sep 27 20:04:23 2018 -0400

    Merge branch 'master' into sync_r4

commit aacb78b7793ab2c71e0a2a774240ee2b5d3f9e7f
Author: jamesagnew <jamesagnew@gmail.com>
Date:   Thu Sep 27 20:01:42 2018 -0400

    Keep working on getting R4 building

commit 4950de46d99897e74d41dfdb10d3d8a3435cb0c9
Author: jamesagnew <jamesagnew@gmail.com>
Date:   Tue Sep 25 13:11:27 2018 -0400

    Ongoing work to get R4 working

commit 819d69c20e112dd3c72569ec50114ddb8263c300
Author: jamesagnew <jamesagnew@gmail.com>
Date:   Thu Sep 20 08:15:36 2018 -0400

    Work on getting build working

commit 2c61b6cd1205ced5d7b822cf10942c69272ea078
Merge: 16b5bb06c8 dfb4de86f1
Author: jamesagnew <jamesagnew@gmail.com>
Date:   Thu Sep 20 05:16:53 2018 -0400

    Merge branch 'master' into sync_r4

commit 16b5bb06c8cdaf8d67c3b80f5aa9be9fccd99aef
Author: jamesagnew <jamesagnew@gmail.com>
Date:   Mon Sep 17 05:30:39 2018 -0400

    Work on R4 sync

commit 23f7517325a14dd2ca1eb5641296ead2776634ae
Author: James Agnew <jamesagnew@gmail.com>
Date:   Sun Sep 16 10:19:00 2018 -0400

    Work on sync

commit 6cc413c1f1dea538295aa4c16c21a5677494ac4c
Author: James Agnew <jamesagnew@gmail.com>
Date:   Fri Sep 14 17:28:28 2018 -0400

    Work on R$ sync

commit df6f6ad2ce783b07ccc383134705d874bc5d2cf1
Author: jamesagnew <jamesagnew@gmail.com>
Date:   Fri Sep 14 08:33:07 2018 -0400

    Work on R4
2018-09-29 13:48:35 -04:00
James Agnew 706e004b9d Bump to 3.6.0-SNAPSHOT 2018-09-19 10:24:48 -04:00
James Agnew ce6a9dbc36 Fix regression from new jetty version 2018-09-11 08:27:34 -04:00
James Agnew daef975734 Version bump to 3.5.0 2018-09-08 07:22:21 +08:00
jamesagnew df651c830e Remove dynamic mode 2018-08-19 17:35:08 -04:00
James Agnew 78a7d64d2c
Merge pull request #1022 from alinleonard/master
Patch operation on OperationsWhichAllowPreferHeader
2018-08-12 17:55:16 -04:00
James Agnew d6293cf9b3 Merge branch 'client_enhancements' 2018-07-30 09:42:38 -04:00
anamariaradu10 3a5556006b
Merge branch 'master' into master 2018-07-27 16:59:52 +03:00
Ana Maria Radu 9c39733aff Fixed issues 2018-07-27 16:48:44 +03:00
James Agnew 23083a9283 Improvements to client and SP indexing in JPA server 2018-07-23 17:37:49 +09:00
jamesagnew a9291b4e4b Add security test 2018-07-19 08:09:07 -04:00
Alin b182d4eca6 fixed the testWritePatchByInstance return code based on fhir doc 2018-07-09 16:23:04 +03:00
James Agnew 99cefd0844 Fix a test 2018-07-01 12:23:55 -04:00
Patrick Werner b1e09fcdf7
Merge pull request #1007 from jamesagnew/1006-Writing-structured-Binary
1006 writing structured binary
2018-06-21 18:03:14 +02:00
patrick-werner 201ba5722b fixing tests 2018-06-21 14:07:21 +02:00
patrick-werner f470653ba4 fixing tests 2018-06-21 11:50:58 +02:00
James Agnew cc0e836680
Auth interceptor early checks (#995)
* Validator fix

* Enhance AuthorizationInterceptor so that it tries to deny access earlier
for compartment searches that are outside the allowable compartment.

* FIx DSTU2 test that wasn't updated

* More test fixes
2018-06-10 17:48:20 -04:00
James Agnew 6feb23896f Hopefully fix #983 2018-06-06 15:51:23 -04:00
jamesagnew 3583dfd503 Correctly include project description in capabilitystatement 2018-06-03 16:19:33 -04:00
jamesagnew 987679483a Version bumps 2018-06-03 15:29:10 -04:00
jamesagnew 9db3be8536 Include implementation URL in generated capabilitystatement 2018-06-03 14:22:15 -04:00
jamesagnew 5cd0e9a6e8 Fix broken test 2018-05-30 09:25:30 -04:00
jamesagnew 0e48506956 Fix test flagged by errorprone 2018-05-30 09:15:12 -04:00
James Agnew a52805e504 Work on JDK9 support 2018-05-30 05:45:08 -04:00
James Agnew 7951d883d0 Merge branch 'master' into java9 2018-05-29 08:43:21 -04:00
Diederik Muylwyk 0e2c57fa60 Bumping version. 2018-05-28 17:44:38 -04:00
Diederik Muylwyk 2871920734 Preparing release. 2018-05-28 10:45:47 -04:00
jamesagnew 67f21426cb Disable content header on response for non-create operations 2018-05-25 07:28:01 -04:00
James Agnew 7f85608a2e Fix accidental regression 2018-05-23 08:17:59 -04:00
jamesagnew 91547d1b6e Merge branch 'master' of github.com:jamesagnew/hapi-fhir 2018-05-21 19:05:01 -04:00
jamesagnew e8139192e0 FIx test issues 2018-05-21 13:07:11 -04:00
patrick-werner eef3267bb8 Forward the cause of the InvocationTargetException to the REST layer.
Discovered through #938
2018-05-17 17:38:23 +02:00
James Agnew a3ff08d9ec
Replace phloc with ph for #775 (#930)
* Replace phloc with ph

* Enable schematron tests

* Make HAPI-FHIR ph-schematron on OSGI

* Work on getting tests passing

* Another test fix

* Fix up transaction handling for DSTU2

* Add changelog

* Avoid double transaction

* Dont use readonly

* One more test fix

* Update to snapshow build

* Resolve a circular dependency

* Try to fix tests

* Solve recurring NPE in DSTU2 tests

* Fix one more test

* Test fix

* More test threading fixes

* One more attempt to get tests passing

* Refactoring for tests

* Refactoring for tests
2018-05-14 17:38:40 -04:00
James Agnew 7688be1231 Work on getting java9 building 2018-05-03 18:34:29 -04:00
James Agnew 593a705365 Performance enhancements on the CapabilityStatement generator for JPA
server
2018-04-28 11:06:42 -04:00
jamesagnew 180336e076 Sync to master 2018-03-29 06:54:24 -04:00
jamesagnew 418e82032f Prep for 3.3.0 2018-03-29 05:48:13 -04:00
James Agnew b56d65ef5b
Merge pull request #871 from johnpoth/hapi-fhir-osgi
Implement #826 - add OSGI support and Apache Karaf features with inte…
2018-03-27 06:06:34 -04:00
jamesagnew 4578b3889f Allow for locale differences in StopwatchTest 2018-03-19 05:54:12 -04:00
jamesagnew 83b1cf5b9f Add credit for #798 and fix broken test 2018-03-15 07:30:32 -04:00
James Agnew 60354a4cc8
Merge branch 'master' into master 2018-03-12 07:41:22 -03:00
jamesagnew 8bdca012d6 Merge branch 'master' of github.com:jamesagnew/hapi-fhir 2018-03-04 11:04:07 -05:00
jamesagnew 07290ae8a0 Sync to latest R4 code 2018-03-04 11:02:47 -05:00
Gaetano Gallo 3009ec7f74 - added guava-testlib as test dependency to modules hapi-fhir-structures-dstu2 and hapi-fhir-structures-dstu3
- added DateRangeParam.equals(Object) and DateRangeParam.hashCode()
- fixed broken DateParamTest
2018-03-02 13:03:30 +01:00
jpoth 66ebfa0ed3 Implement #826 - add OSGI support and Apache Karaf features with integration tests 2018-02-28 11:32:53 +01:00
Gaetano Gallo 1caf768fd5 - implemented DateParam.equals() and DateParam.hashCode() which comes in handy when writing tests ... 2018-02-27 10:15:19 +01:00
James Agnew 3cbf669007 Don't crash on startup if an invalid subscription is in the database 2018-02-03 15:47:48 -05:00
James Agnew f976b7bf7e Add new interceptor method which enabled interceptors to modify response 2018-01-28 14:01:20 -06:00
Simon Janic 97a1ccac3d Merge remote-tracking branch 'upstream/master' 2018-01-28 16:43:32 +01:00
James Agnew 16038ece26 Version bump to 3.3.0-SNAPSHOT 2018-01-23 10:31:01 -05:00
James Agnew 6468ca474a Verion bump to 3.2.0 2018-01-13 02:14:33 -05:00
James Agnew 4e2db2b58b More work on multitenancy 2018-01-11 11:23:14 -05:00
James Agnew f58a03dacf Add some tests 2018-01-11 09:26:28 -05:00
jamesagnew 0352d48720 Bump copyright message to 2018 2018-01-08 13:52:15 -05:00
Simon Janic 8427fc4547 Merge remote-tracking branch 'upstream/master' 2017-11-26 14:23:33 +01:00
Simon Janic f426b0679c Refactored the meta extensions, so it reuses the existing logic that is
used for encoding and parsing extensions on resources.
2017-11-26 14:22:41 +01:00
James Agnew 3e296f9d1b Merge branch 'master' of github.com:jamesagnew/hapi-fhir 2017-11-25 17:53:01 -05:00
James Agnew 6afe6804db Fix #796 - Correctly escape spaces in generated URLs 2017-11-25 17:52:12 -05:00
jamesagnew 5b909b4746 Version bump to 3.2.0-SNAPSHOT 2017-11-24 13:32:47 -05:00
jamesagnew 42dd34252d Version bump to 3.1.0 2017-11-23 13:27:21 -05:00
Simon Marco Janic 0077215b19 [(master)] Added support for references in meta 2017-11-21 10:38:14 +01:00
Simon Marco Janic f0477ac807 [(master)] Fixed faulty test 2017-11-06 13:38:25 +01:00
Simon Marco Janic 1c1098a2b7 [(master)] Added check for sub-extensions. 2017-11-06 12:32:11 +01:00
Simon Marco Janic b4032f4e8c [(master)] Added support for extensions in Meta resource 2017-11-06 12:32:07 +01:00
James Agnew 34679081fb FIx windows test dependency 2017-10-30 16:11:13 -04:00
James Agnew 0fec0485e8 Merge pull request #717 from aehrc/feature/ifModifiedSince_bugfix_master
fix bugs with inverted test for If-Modified-Since (impl and tests)
2017-10-26 18:31:19 -04:00
James Agnew 0875318842 Merge pull request #711 from InfiniteLoop90/master
Added R4 to the client's server version check. Also tweaked the ClientServerValidation* tests to be a little more predictable
2017-10-26 17:56:48 -04:00
James 15ba0dff03 Clean up email subscription type 2017-10-26 06:02:12 -04:00
James Agnew 2c2ba54c0a Fix #765 - Remove "Test" resource 2017-10-18 16:46:19 -04:00
James Agnew 9ca85b4cf3 Re-enable errorprone on standard hapi fhir build. woohoo! 2017-10-15 11:27:30 -04:00
James 2a18ce1b7b Remove accidental debug code that broke tests 2017-10-14 07:05:49 -04:00
James 31fb1236a1 Reuse bundle ID when returning query cache results 2017-10-11 06:05:14 -04:00
James 8e760858a8 Merge branch 'master' of github.com:jamesagnew/hapi-fhir 2017-09-28 06:36:58 -04:00
James 4ef7e03417 Give tests a bit more memory 2017-09-28 06:36:37 -04:00
James Agnew 87383ad802 Version bump to 3.1.0-SNAPSHOT 2017-09-27 21:23:34 -04:00
James 49bdaa1a45 Version bump to 3.0.0 2017-09-23 17:31:39 -04:00
James 95da0b7fef FIx test 2017-09-18 06:22:26 -04:00
James 0eea7b8f1f Fix android build hopefully 2017-09-01 06:39:55 -04:00
James Agnew 022b556648 Add documentation for logginginterceptor processing time variable (which
already worked, but wasn't documented)
2017-08-31 10:17:31 -04:00
James Agnew cae21f4898 Update syntax highlighter to not use tables 2017-08-28 10:26:07 -04:00
James Agnew 1ec14f4a31 Small perf improvement for JPA terminology 2017-08-24 13:07:05 -04:00
Michael Lawley a4365f9b83 fix bugs with inverted test for If-Modified-Since (impl and tests) 2017-08-24 13:54:59 +10:00
Clayton Bodendein 9a6f4f89a3 Added R4 to the client's server version check. Also tweaked the ClientServerValidation* tests to be a little more predictable 2017-08-13 17:33:47 -05:00
James be5c5ebecd Merge in HAPI 3.0.0 working branch!
Squashed commit of the following:

commit 12f89a423a
Author: James <jamesagnew@gmail.com>
Date:   Sun Aug 13 14:38:51 2017 -0400

    Minimize validation resources

commit f6868cce5c
Merge: 3b80779fd3 1e158311d8
Author: James <jamesagnew@gmail.com>
Date:   Sun Aug 13 14:05:34 2017 -0400

    Forward port fix for #710

    Merge branch 'master' into hapi3_refactor

commit 3b80779fd3
Merge: 1f534985e8 356d9acaf7
Author: James <jamesagnew@gmail.com>
Date:   Sun Aug 13 12:31:09 2017 -0400

    Forward port #705, #708, and #710

    Merge branch 'master' into hapi3_refactor

commit 1f534985e8
Merge: 7c39a47852 dedd3d635b
Author: James <jamesagnew@gmail.com>
Date:   Sun Aug 13 10:52:59 2017 -0400

    Forward port #695

    Merge branch 'master' into hapi3_refactor

commit 7c39a47852
Merge: e0ffb84d21 6efafe62f1
Author: James <jamesagnew@gmail.com>
Date:   Sun Aug 13 09:53:17 2017 -0400

    Forward port #688

    Merge branch 'master' into hapi3_refactor

commit e0ffb84d21
Merge: 52388c11c1 d19b00ff09
Author: James <jamesagnew@gmail.com>
Date:   Sat Aug 12 14:59:46 2017 -0400

    Merge branch 'master' into hapi3_refactor

commit 52388c11c1
Author: James <jamesagnew@gmail.com>
Date:   Sat Aug 12 06:21:46 2017 -0400

    Cleanup

commit 209752cd63
Author: James <jamesagnew@gmail.com>
Date:   Thu Aug 10 11:18:19 2017 -0400

    Fix tests

commit 4543408dc8
Author: James <jamesagnew@gmail.com>
Date:   Sat Aug 5 06:55:50 2017 -0400

    Fix a potential deadlock

commit ee360f5376
Author: James <jamesagnew@gmail.com>
Date:   Sat Aug 5 06:22:06 2017 -0400

    Add R4 code to CLI

commit 1a95ba3b65
Author: James Agnew <jamesagnew@gmail.com>
Date:   Thu Aug 3 06:14:01 2017 -0400

    More cleanup

commit f0d8802681
Author: James <jamesagnew@gmail.com>
Date:   Wed Aug 2 11:27:43 2017 -0400

    Tests are working!

commit a4cbda357e
Author: James Agnew <jamesagnew@gmail.com>
Date:   Wed Aug 2 10:42:04 2017 -0400

    Connection handling cleanup for new tests

commit 0e2cecfbd0
Author: James Agnew <jamesagnew@gmail.com>
Date:   Wed Aug 2 10:16:28 2017 -0400

    Clean up R4 JPA tests

commit 40317a650d
Author: James <jamesagnew@gmail.com>
Date:   Wed Aug 2 09:12:38 2017 -0400

    Work on R4 for JPA server

commit e7f8f8c30d
Author: James <jamesagnew@gmail.com>
Date:   Tue Aug 1 20:43:47 2017 -0400

    More work on porting tests

commit 43c9003258
Author: James <jamesagnew@gmail.com>
Date:   Tue Aug 1 07:09:29 2017 -0400

    Work on porting DSTU1 tests

commit 602857f1e2
Author: James Agnew <jamesagnew@gmail.com>
Date:   Mon Jul 31 22:34:08 2017 -0400

    More work on bring unit tests up to date

commit e326a7b0cd
Author: James Agnew <jamesagnew@gmail.com>
Date:   Mon Jul 31 17:36:38 2017 -0400

    Credit for #686 and forward port the fix to R4 validator

commit 96543c3992
Merge: 3fb75aa61a 9901b802c4
Author: James Agnew <jamesagnew@gmail.com>
Date:   Mon Jul 31 17:12:33 2017 -0400

    Merge branch 'master' into hapi3_refactor

commit 3fb75aa61a
Author: James <jamesagnew@gmail.com>
Date:   Mon Jul 31 15:21:30 2017 -0400

    More work on cleanup

commit b02fbb6804
Author: James Agnew <jamesagnew@gmail.com>
Date:   Sun Jul 30 22:11:07 2017 -0400

    Work on porting STU1 tests

commit 1ae37b0db3
Author: James Agnew <jamesagnew@gmail.com>
Date:   Sun Jul 30 20:56:10 2017 -0400

    Try to get coverage report working

commit 72b88849b3
Author: James Agnew <jamesagnew@gmail.com>
Date:   Sun Jul 30 20:27:02 2017 -0400

    Fix android tests

commit e5f6c35aea
Author: James <jamesagnew@gmail.com>
Date:   Sun Jul 30 19:31:18 2017 -0400

    More work on getting legacy code cleaned up

commit 0b513b0845
Author: James <jamesagnew@gmail.com>
Date:   Sun Jul 30 18:41:13 2017 -0400

    Continue work on removing deprecated API

commit defea69aa3
Author: James Agnew <jamesagnew@gmail.com>
Date:   Sun Jul 30 17:10:01 2017 -0400

    More cleanup of legacy code

commit 9ae7295705
Author: James <jamesagnew@gmail.com>
Date:   Sun Jul 30 07:11:45 2017 -0400

    More cleanup of legacy code

commit ebd3eeb5ee
Author: James Agnew <jamesagnew@gmail.com>
Date:   Sun Jul 30 06:43:25 2017 -0400

    More work on removing legacy code

commit 92224c2532
Author: James <jamesagnew@gmail.com>
Date:   Sat Jul 29 18:44:06 2017 -0400

    Remove DSTU1 Bundle

commit c52cacf71b
Author: James <jamesagnew@gmail.com>
Date:   Sat Jul 29 14:27:42 2017 -0400

    Now compiling

commit b405e51773
Merge: c3ddf04e25 cb2cea54d7
Author: James Agnew <jamesagnew@gmail.com>
Date:   Fri Jul 28 06:21:02 2017 -0400

    Merge branch 'master' into hapi3_refactor

commit c3ddf04e25
Author: James <jamesagnew@gmail.com>
Date:   Thu Jul 27 11:06:06 2017 -0400

    Sync R4 releases in

commit b13333c3c0
Author: James <jamesagnew@gmail.com>
Date:   Fri Jul 14 05:52:33 2017 -0400

    JPA server is now able to handle placeholder IDs (e.g. urn:uuid:00....000) being used in Bundle.entry.request.url as a part of the conditional URL within transactions.

commit 2e60ff7521
Author: James Agnew <jamesagnew@gmail.com>
Date:   Thu Jul 13 20:02:46 2017 -0400

    Fix imports

commit a92ace2e0d
Merge: 3196db96d1 1a6b3ea867
Author: James Agnew <jamesagnew@gmail.com>
Date:   Thu Jul 13 12:02:27 2017 -0400

    Merge branch 'master' into hapi3_refactor

commit 3196db96d1
Author: James Agnew <jamesagnew@gmail.com>
Date:   Thu Jul 13 11:48:10 2017 -0400

    Don't add false paging link to request

commit bd4e1d3388
Author: James <jamesagnew@gmail.com>
Date:   Sun Jul 9 21:32:16 2017 -0400

    Finally building correctly!

commit 6464ce9304
Author: James <jamesagnew@gmail.com>
Date:   Sun Jul 9 16:38:28 2017 -0400

    Work on refactor

commit 0059f2e48e
Author: James <jamesagnew@gmail.com>
Date:   Sat Jul 8 07:16:20 2017 -0400

    Keep working on refactor

commit 6c2e87e8cc
Author: James Agnew <jamesagnew@gmail.com>
Date:   Thu Jul 6 22:35:13 2017 -0400

    Lots of work on refactor

commit 11cab97504
Merge: 34ec6b8807 6c47bd4c51
Author: James Agnew <jamesagnew@gmail.com>
Date:   Thu Jul 6 21:43:57 2017 -0400

    Merge branch 'master' into hapi3_refactor

commit 34ec6b8807
Merge: f8e647511b c520e60ac1
Author: James Agnew <jamesagnew@gmail.com>
Date:   Thu Jul 6 21:43:49 2017 -0400

    Merge branch 'hapi3_refactor' of github.com:jamesagnew/hapi-fhir into hapi3_refactor

commit f8e647511b
Author: James Agnew <jamesagnew@gmail.com>
Date:   Thu Jul 6 18:46:55 2017 -0400

    Work on hapi3 changes

commit c520e60ac1
Author: James <jamesagnew@gmail.com>
Date:   Wed Jul 5 08:08:40 2017 -0400

    Keep working on refactor

commit f1d2ee9092
Author: James Agnew <jamesagnew@gmail.com>
Date:   Mon Jul 3 22:10:59 2017 -0400

    Continue refactor for HAPI 3

commit 9281ccafc3
Merge: ea1264cd8e 294d080bd3
Author: James Agnew <jamesagnew@gmail.com>
Date:   Mon Jul 3 20:34:16 2017 -0400

    Merge branch 'master' into hapi3_refactor

commit ea1264cd8e
Author: James <jamesagnew@gmail.com>
Date:   Wed Jun 28 10:26:01 2017 -0400

    Continue work on refactor

commit fbe2f98a02
Merge: b2bef47100 0a4dcc32ec
Author: James <jamesagnew@gmail.com>
Date:   Wed Jun 28 06:21:22 2017 -0400

    Merge branch 'master' into hapi3_refactor

commit b2bef47100
Author: James <jamesagnew@gmail.com>
Date:   Tue Jun 27 21:13:23 2017 -0400

    Work on refactor

commit 8f76e4e463
Author: James Agnew <jamesagnew@gmail.com>
Date:   Sun Jun 25 21:55:35 2017 -0400

    Lots of work on refactoring
2017-08-13 14:39:47 -04:00
James Agnew 72be7ab795 Merge pull request #706 from InfiniteLoop90/master
Fixes #705 - Client correctly validates the server's conformance statement FHIR version
2017-08-13 11:03:52 -04:00
James Agnew dedd3d635b Merge pull request #695 from SRiviere/#622
#622 Extension lost on ID datatype or extension of type primiti…
2017-08-13 10:03:58 -04:00
James Agnew 6efafe62f1 Merge pull request #688 from CarthageKing/bugfix-issue659
Correctly serialize baseurl/FooResource references
2017-08-12 14:51:46 -04:00
Clayton Bodendein 1743d108b6 Fixed #705 by making RestfulClientFactory check for the correct FHIR version strings when the client code tries to validate the server's conformance statement. Also fixed the corresponding unit tests. 2017-08-06 14:03:15 -05:00
James Agnew 6aa58cf887 Move tests in anticipation of HAPI 3 2017-07-26 16:59:35 -04:00
Sebastien Riviere 0fd5a44b5e Fixed #622 Extension lost on ID datatype or extension of type primitive during parsing 2017-07-24 13:43:55 +02:00
James Agnew 375fb897f9 Fix test 2017-07-12 14:05:06 -04:00
James Agnew 65cc41e376 Allow patch to proceed with AuthorizationInterceptor 2017-07-12 11:14:14 -04:00
James Agnew a337d282e3 Fix tests 2017-07-12 09:16:55 -04:00
James Agnew 38b7212e52 Add line selection and header display to ResponseHighlighterInterceptor 2017-07-12 09:04:05 -04:00
James Agnew f1f72980de Merge pull request #651 from eug48/master
ResponseHighlighter enhancement proposal - hyperlinks and selections
2017-07-10 16:03:40 -04:00
michael.i.calderero bae1ee69ba updated tests based on changes 2017-07-10 15:03:16 -05:00
michael.i.calderero 9aaa49dd94 add test to show issue #659 2017-07-10 14:35:06 -05:00
James Agnew c9fcef0372 Clean up handling of searches nested in batch and transaction 2017-06-30 16:20:32 -04:00
James Agnew 7632cfa991 Fix local dependency 2017-06-09 19:21:04 -04:00
James Agnew 7588a2ecff Modify patch for #655 so that it fixes #604 without causing us to allow
invalid values
2017-06-09 16:30:20 -04:00
James Agnew e1cfc8212e Merge in patch from #655 2017-06-09 15:36:19 -04:00
christian ohr 872d72629c #604:allow MINUTE precision for datetimes 2017-06-09 15:21:53 -04:00
James 14edc79ac1 Version bump to 2.6-SNAPSHOT 2017-06-09 07:28:29 -04:00
James 8b5209ff67 Version bump to 2.5 2017-06-08 06:34:44 -04:00
James Agnew c04146a76a Revert "Allow MINUTE precision for datetimes. Closes #604" 2017-06-07 21:42:52 -04:00
christian ohr aafde2eceb #604:allow MINUTE precision for datetimes 2017-05-26 15:27:58 +02:00
Eugene Lubarsky 5bbf8686f8 Fix for ResponseHighlightingInterceptorTest breakage 2017-05-19 20:28:05 +10:00
James Agnew 45041830bc Server now respects the If-Modified-Since header for read operations 2017-05-17 14:57:05 -04:00
James Agnew 2a89ff88f7 Merge pull request #630 from Jaypeg85/concurrency_issue
concurrency_issue
2017-05-01 15:20:45 -04:00
James 716fa56b8f Merge branch 'jpa_perf_enhancements' 2017-04-21 06:30:22 -04:00
Jeppe Langhoff Sørensen 6eda689fb1 [(concurrency_issue)] Fixed concurrency issues in BaseRuntimeElementCompositeDefinition
Removed exceptions used in control flow in ParserState
Test showing further concurrency issues in FhirContext (committed as ignored).
2017-04-21 09:34:33 +02:00
James cbc652d226 Version bump to 2.5-SNAPSHOT 2017-04-20 16:13:15 -04:00
James Agnew 8887f57577 Merge branch 'master' of github.com:jamesagnew/hapi-fhir 2017-04-20 16:12:02 -04:00
James Agnew bc545f8e3c Issue #590 - Handle paging requests for AuthorizationInterceptor 2017-04-20 16:11:09 -04:00
James 9d3d15ce6f Version bump to 2.4 2017-04-19 21:38:36 -04:00
James 077676fd03 Bring DSTU3 structs up to FHIR R3
Squashed commit of the following:

commit 65b70d30c9
Author: James <jamesagnew@gmail.com>
Date:   Tue Apr 18 07:44:08 2017 -0400

    More work on bringing structs up to date

commit 1df2de0667
Author: James <jamesagnew@gmail.com>
Date:   Tue Apr 18 07:12:45 2017 -0400

    Working

commit 9a51323e03
Author: James <jamesagnew@gmail.com>
Date:   Mon Apr 17 22:18:24 2017 -0400

    Updates to STU3

commit 40aebba0a7
Author: James <jamesagnew@gmail.com>
Date:   Mon Apr 17 18:30:26 2017 -0400

    Fix regression caused by #610
2017-04-18 07:48:38 -04:00
James Agnew c66e147ec8 Merge pull request #613 from SRiviere/jaxrs-sever-evolution
Changing with stackTrace paramter without server restart
2017-04-17 17:56:33 -04:00
James Agnew 217d9f8176 More perf work 2017-04-16 14:46:15 -04:00
James 1039bbec97 More perf work 2017-04-14 07:25:01 -04:00
michael.i.calderero 125f9b4fed JsonParser tests for OverrideResourceIdWithBundleEntryFullUrl 2017-04-13 13:37:02 -05:00
michael.i.calderero b890bf3c75 XmlParser tests for OverrideResourceIdWithBundleEntryFullUrl 2017-04-13 12:09:31 -05:00
Sebastien Riviere e99495a83f Adding Unit tests to reproduce : Extension of Id Datatype and Extension of primitive extension lost during parsing/encoding #622 2017-04-12 10:00:32 +02:00
James Agnew 269e2d9343 Another fix for errorprone 2017-04-03 15:00:37 -04:00
James Agnew 91ff109300 Fix #608 - Don't include SupportingDocumentation resource in DSTU2 2017-03-26 09:56:33 +08:00
James Agnew 69748538d6 Fix a big with the new permissions 2017-03-24 21:10:44 +08:00
James Agnew 44c0075409 AuthorizationInterceptor can now allow make read or write authorization decisions on a resource by instance ID 2017-03-24 21:10:44 +08:00
James 40848b1beb Version bump to 2.4-SNAPSHOT 2017-03-18 12:24:39 -04:00
James e18ab206d7 Version bump to 2.3 2017-03-17 21:21:59 -04:00
James Agnew 45e4bd92ee Merge branch 'master' into jaxrs-sever-evolution 2017-03-16 22:04:55 -04:00
James 5282110f02 Tests for #142 2017-03-16 22:00:04 -04:00
James 8a32e4bae5 Merge branch 'master' of github.com:jamesagnew/hapi-fhir 2017-03-16 21:36:14 -04:00
James 9501ea0961 Merge branch 'master' of https://github.com/hugosoares/hapi-fhir into hugosoares-master 2017-03-16 21:32:51 -04:00
James Agnew a867890554 585 authorizationinterceptor wildcards (#586)
* Add wildcards for authorizationinterceptor

* Add changelog
2017-03-14 22:26:45 -04:00
James Agnew 5811702a92 Merge branch 'master' into master 2017-02-17 17:39:55 -05:00
hugosoares 09f44ebc2d Merge branch 'master' into master 2017-02-09 14:23:33 +00:00
Hugo Soares 6eee5e696e Changes requested by james
https://github.com/jamesagnew/hapi-fhir/pull/542
2017-02-09 13:59:00 +00:00
James Agnew 0dd6364fe5 Improve paging in JPA server for _history operation 2017-02-08 21:42:17 -05:00
sekaijin 7adb35d003 resolve some warnings
unused
then clause does not complete normally
serial
missing @Override
remove unnecessary cast
2017-02-08 16:41:03 +01:00
Sebastien Riviere c3447c3b4d Remove substitution string to use relative url, Fix client parser and custom extension. 2017-02-08 11:14:19 +01:00
Sebastien Riviere 3bf6555d61 Merge branch 'master' of https://github.com/jamesagnew/hapi-fhir into jaxrs-sever-evolution 2017-02-06 11:34:31 +01:00
James dd0e47afc3 Make projects import cleanly into eclipse 2017-02-04 16:31:18 -05:00
sekaijin a150a96089 dependencies convergence
correct dependencies convergence
correct version use ${project.version}
2017-01-29 19:22:28 +01:00
sekaijin 23784c1619 remove .settings .project .classpath file of eclipse 2017-01-28 17:13:47 +01:00
Sebastien Riviere dabb3ea2c5 Merge branch 'master' of https://github.com/jamesagnew/hapi-fhir into jaxrs-sever-evolution
# Conflicts:
#	hapi-fhir-structures-dstu3/src/test/java/ca/uhn/fhir/parser/JsonParserDstu3Test.java
2017-01-27 10:16:43 +01:00
James 12598b4e3b Correctly handle declared extensions with multiple possible types
Squashed commit of the following:

commit d6ea0552b7
Author: James <jamesagnew@gmail.com>
Date:   Thu Jan 26 09:04:58 2017 -0500

    FIx test

commit e5876f7d86
Author: James <jamesagnew@gmail.com>
Date:   Thu Jan 26 08:35:38 2017 -0500

    Work on extensison

commit 7e573c2299
Author: James <jamesagnew@gmail.com>
Date:   Thu Jan 26 07:27:25 2017 -0500

    Work on extensions

commit 234b4a0c1c
Author: James Agnew <jamesagnew@gmail.com>
Date:   Thu Jan 26 06:25:47 2017 -0500

    More work on these extensison

commit 2eb780a690
Author: James Agnew <jamesagnew@gmail.com>
Date:   Wed Jan 25 22:35:57 2017 -0500

    Work on multitype extensions
2017-01-26 11:07:52 -05:00
James Agnew 95b2751829 Fix test 2017-01-24 14:41:53 -05:00
James Agnew 344e324929 Fix #544
Squashed commit of the following:

commit 1ab9b58e9f
Author: James Agnew <jamesagnew@gmail.com>
Date:   Tue Jan 24 10:46:56 2017 -0500

    Changes working now

commit 5c752cdace
Author: James <jamesagnew@gmail.com>
Date:   Tue Jan 24 08:43:04 2017 -0500

    Get JPA working with new uuid: logic

commit 127b76884a
Author: James Agnew <jamesagnew@gmail.com>
Date:   Mon Jan 23 21:11:18 2017 -0500

    Fix test

commit 599bbe236c
Author: James Agnew <jamesagnew@gmail.com>
Date:   Mon Jan 23 18:42:46 2017 -0500

    Work on #544
2017-01-24 10:47:24 -05:00
James 6d8715fc4a Fix test 2017-01-21 18:04:25 -05:00
James 3ff29370e6 Merge branch 'master' of github.com:jamesagnew/hapi-fhir 2017-01-21 18:03:58 -05:00
James d616d20511 Send correct status code from ResponseHighliterInterceptor 2017-01-21 18:03:41 -05:00
James Agnew 4e2e54a929 Merge pull request #540 from CarthageKing/feature-resource_not_supported-fix
return 404 instead of 400 when the FHIR resource/endpoint is not recognized/not supported
2017-01-20 18:49:49 -05:00
Sebastien Riviere cac44c736c Add the possibility to use the serverBaseUrl to generate the url of extension, if %BASE_SERVER_URL% is found 2017-01-19 14:54:17 +01:00
hugosoares c9e11f64aa Merge branch 'master' into master 2017-01-19 09:03:43 +00:00
James f59ac8cf83 Version bump license header 2017-01-18 22:18:37 -05:00
Hugo Soares 59d29c45b3 Feature Request: Add client support for $process-message special operation #407
Changed client to send messages to a processing server:
Object response = client
.operation()
.onServer()
.processMessage()
.setResponseUrlParam("http://myserver/fhir")
.setMessageBundle(msgBundle)
.execute();
2017-01-18 19:33:56 +00:00
michael.i.calderero b59c24ab7c return 404 instead of 400 when the FHIR resource/endpoint is not
recognized/not supported
2017-01-17 20:37:43 -06:00
James Agnew 22f796fa7c Allow history operation at type level with authorizationinterceptor 2017-01-16 18:41:39 -06:00
James Agnew dbc6abc658 Fix #504 - Error if custom type has illegal extensions 2017-01-13 21:46:16 -06:00
James Agnew ea27689a40 Add test for #537 2017-01-13 11:24:35 -05:00
James Agnew 8ae8f1d8b6 Add test for #505 2017-01-13 11:19:01 -05:00
James Agnew 64d12240c0 Add tests for #504 2017-01-13 11:10:48 -05:00
James b448e13edd Version bump to 2.3 2016-12-20 19:01:31 -05:00
James 0ec61533a8 Publish 2.2 2016-12-20 19:00:37 -05:00
James 964919d880 Improve parsing 2016-12-19 14:03:11 -05:00
James Agnew 4eb2e017f8 Fix #528 - Allow reads by compartment in authorizationinterceptor 2016-12-13 18:30:47 -05:00
James 1a352b782b Fix compile error 2016-12-12 08:37:28 -05:00
James Agnew 947ccd28a4 Merge pull request #507 from rqg0717/patch-2
Update MoneyDt.java
2016-12-12 07:39:26 -05:00
James ab17ee68a3 Revert IFhirVersion method signature changes for #520 2016-12-11 18:55:59 -05:00
James b0d656e5d9 Refactor fix for #520 a bit so that version in DSTU3 is always pulled
from the model
2016-12-10 14:40:27 -05:00
James ee63bbea74 Fix #516 - Handle STU3 invalid enum values with an appropriate exception 2016-12-10 14:14:22 -05:00
James Agnew a9d7b8d636 Add test and credit for #518 2016-11-25 18:28:18 -05:00
James Agnew 888f42a032 Introduce new CORS interceptor and switch examples to use it 2016-11-21 18:30:51 +01:00
James Agnew 03935be97f Work on common FluentPath interface 2016-11-21 15:52:17 +01:00
James Agnew 5846ce4518 Make the parser configurable so that when parsing an invalid empty value (e.g. {"status":""} parser will either throw a meaningful exception or log a warning depending on the configured error handler. 2016-11-21 14:48:44 +01:00
James Agnew bf35f7e4b2 Fix #495 - Auto-detect DSTU3 mode when those resources are on classpath 2016-11-21 13:44:54 +01:00
James Ren 14b28fd436 Update MoneyDt.java
Add Constructors
2016-11-17 13:49:00 -05:00
James 2d7592f7a8 Version bump to 2.2-SNAPSHOT 2016-11-11 22:39:45 -05:00
James 2dd26b6367 Version bump to 2.1 2016-11-11 15:16:53 -05:00
James 89e3021588 Add test for #449 2016-11-07 07:53:56 -05:00
James af8ae69ee4 AuthorizationInterceptor enhancements 2016-11-04 07:43:22 -04:00
James 14f47b2048 Merge branch 'master' of github.com:jamesagnew/hapi-fhir 2016-11-04 06:53:39 -04:00
James f838b80373 Work on authorization interceptor 2016-11-04 06:53:26 -04:00
James Agnew 7c6ca640d1 Fix failing test 2016-11-03 11:41:49 -04:00
James 6cb502266c More cleanup for auth interceptor 2016-11-03 08:27:14 -04:00
James 8c53ad24f7 Clean up authorization interceptor tests 2016-11-03 08:10:54 -04:00
James 3a5a771de7 Fix #484 - Correctly parse resources containing an empty div tag as the narrative 2016-11-03 07:51:11 -04:00
James 2a7fa4d8a5 Make authorizationinterceptor stricter 2016-10-22 18:00:55 -04:00
Bill Denton 913fd32c2b Support JSON-like resource structures (#469)
* rebuild on 2.1 code and add more test coverage

* additional test coverage
2016-10-19 10:40:38 -04:00
James Agnew 3d686e9383 Fix #464 - Pretty print by default in ResponseHighlighterInterceptor 2016-10-18 14:58:28 -04:00
James Agnew f5eda76388 Use new STU3 mimetypes by default 2016-10-06 12:17:59 -04:00
James Agnew 26cd316343 Fix #414: Parser should not choke with a NullPointerException if it
encounters an extension without a URL
2016-09-30 17:35:29 -04:00
James Agnew a95341d70f Fix race conditions for tests 2016-09-26 12:37:03 -04:00
James Agnew 2c277864f1 Fix tests 2016-09-26 12:24:54 -04:00
James Agnew 2316a887c2 Add some test logging 2016-09-26 11:27:23 -04:00
James Agnew 3d73aad275 Fix unit tests 2016-09-21 16:58:57 -04:00
James Agnew ae97165a0a Add interceptor method on server which will be called after all other
processing
2016-09-18 16:08:16 -04:00
James Agnew 4de0e38e01 Add credit for #446 and #448 2016-09-16 13:16:28 -04:00
James Agnew a2ffc6af05 Fix #444 - Correct handling of parsing milliseconds in dates before 1970 2016-09-09 18:18:28 -04:00
James Agnew 202a1ea885 Fix web testing UI regression 2016-09-06 17:59:04 -04:00
James Agnew 6b9f8ec487 Fix unit tests 2016-08-30 18:27:57 -04:00
James Agnew 906bcfb803 Version bump to 2.1 2016-08-30 10:55:55 -04:00
James Agnew d27aad487e Bump to 2.0 release 2016-08-30 10:50:04 -04:00
James Agnew 17940b8a24 Improve performance when parsing contained resources 2016-08-25 17:41:33 -04:00
James Agnew 9d3bd1ada4 Don't add an empty narrative if no template exists 2016-08-24 13:06:08 -04:00
James 9f5d672133 Improve error handling in narrative generator 2016-08-24 06:09:55 -04:00
James Agnew c4d302df8d Upgrade to Thymeleaf 3 2016-08-23 19:11:49 -04:00
James 696fa8701b Add unit test for #428 2016-08-23 07:10:28 -04:00
James 35a890db34 Merge branch 'master' of github.com:jamesagnew/hapi-fhir 2016-08-22 07:42:02 -04:00
James Agnew eee168ced6 Add support for conditional operations to AuthorizationInterceptor 2016-08-15 13:35:50 -04:00
James b0d19c3a65 Fix #423 - Encode custom types with custom type fields correctly 2016-08-14 13:05:16 -04:00
James Agnew 74950a4efc Fix regression when parsing contained resources 2016-08-05 18:01:44 -04:00
jamesagnew 7dbd5a21ca Fix tests 2016-07-24 09:20:54 -04:00
James Agnew 94128e2e6d Fix tests 2016-07-18 13:50:08 -04:00
jamesagnew 196c11bfa2 Use new style mimetypes but keep supportuing the old ones as well 2016-07-17 18:35:06 -04:00
jamesagnew fa37afb61f Merge branch 'master' of github.com:jamesagnew/hapi-fhir 2016-07-12 21:44:52 -04:00
jamesagnew ed941a116b Update to use GSON 2016-07-12 21:44:40 -04:00
James Agnew c3e9f618eb Version bump to 2.0-SNAPSHOT 2016-07-12 11:12:07 -04:00
jamesagnew acaf2135c5 Finalize 1.6 release 2016-07-06 07:29:20 -04:00
James Agnew 344b1256ce Add tests 2016-07-04 18:32:57 -04:00