Commit Graph

471 Commits

Author SHA1 Message Date
Tuomo Ala-Vannesluoma d3bd48f66a
Suppress Authorization header value from the request headers (#2194) 2021-03-26 09:14:14 -04:00
James Agnew 8352bc9c01
Correct the path to the select2 library in the testpage overlay (#2505)
* Correct the path to the select2 library in the testpage overlay

* Add changelog
2021-03-25 10:52:15 -04:00
James Agnew dc41d5ad61
Add terminology mapping and display population interceptors (#2488)
* Start work on code mapping interceptors

* Work on generation

* Add terminology mapping and display population interceptors

* Add changelog

* License header updates

* Test fixes

* Fix typo

* Interceptor fixes

* License header update

* Test fixes

* Mapping fixes

* Version bump

* License header updates

* Add null tests

* Add null guard

* Intermittent fix
2021-03-21 12:03:57 -04:00
James Agnew 3eda19c65a
Version bump (#2400)
* Version bump

* Docs changes

* Docs tweaks

* Docs tweak

* Spelling fixes

* Docs tweaks
2021-02-18 11:07:49 -05:00
jamesagnew 919c1dbddc Version bump to 5.3.0 2021-02-17 07:10:13 -05:00
James Agnew 65ac0e80fb
Add CapabilityStatement customizer (#2387)
* Add CapabilityStatement customizer

* Fix javadocs
2021-02-15 14:58:34 -05:00
Alejandro Medina f55cb96c8f
Update tmpl-head.html (#2273)
wrong path in library select2
2021-01-07 06:01:33 -05:00
jamesagnew 0c31741eec Version bump to 5.3.0-SNAPSHOT 2020-11-18 14:52:43 -05:00
jamesagnew 4d441ad7f2 Version bump to 5.2.0 2020-11-18 06:30:20 -05:00
James Agnew aa3da9b05f
Bump bootstrap version (#2128)
* Bump bootstrap version

* Add changelog

* Resolve fixme

* Rmove test code
2020-10-12 20:47:14 -04:00
James Agnew 5b6ee4e475
Dependency version bump (#2074)
* Dependency version bump

* More dependency work

* One more fix
2020-09-14 08:42:28 -04:00
jamesagnew 92718c7ef2 Version bump to 5.2.0-SNAPSHOT 2020-08-12 10:23:46 -04:00
jamesagnew 5fb7bd5156 Version bump to 5.1.0 2020-08-11 17:43:24 -04:00
James Agnew 0de0b88aa0
Fix TestpageOverlay XSS Vulnerability (#2027)
* Resolve XSS vulnerability

* Add changelog
2020-08-09 07:06:11 -04:00
Tadgh d1b963321a
MVP EMPI implementation (#1857)
EMPI Initial Implementation (still plenty of known gaps)
2020-05-22 15:03:20 -04:00
jamesagnew 52c8e3551c Version bump to 5.1.0-SNAPSHOT 2020-05-15 14:43:32 -04:00
jamesagnew fe0e07a313 Bump to 5.0.1 2020-05-15 05:47:01 -04:00
jamesagnew 1d13e29ac0 Version bump to 5.1.0-SNAPSHOT 2020-05-12 20:04:20 -04:00
jamesagnew d631ecff4a Prepare for 5.0.0 2020-05-12 11:49:18 -04:00
jamesagnew 6baf1995c9 Work on subscription cleanup 2020-04-02 20:30:19 -04:00
James Agnew bde7c356fe
Implement Jackson parser/serializer (#1733)
* [dev] Integration of a Jackson serializer and deserializer - first stage

* [fix] Fixed some serializing issues
[improve] Improved the processing, removed the loggers

* [clean] Removed the JacksonSerializer class, replaced all the Gson classes with Jackson classes

* [clean] Small cleanup

* [improve] Throw a ConfigurationException if the JsonGenerator cannot be created

* [improve] Use the ObjectMapper's `readTree` instead of `readValue`

* [dev] Latest fixes and improvements

* [dev] Use the Jackson serializer

* [clean] Removed the ObjectMapper configuration, for now

* [fix] Use the GsonStructure also for the parsing of a FHIR resource

* [clean] Removed the LinkedList usage

* Work on preparing for merge of #1673

* Resolve build errors

* Work on parser integration

* Tests passing

* Resolve fixme

* CLeanup

* Fix dependency

Co-authored-by: Bogdan Solga <bogdan.solga@gmail.com>
2020-03-17 17:27:26 -04:00
James Agnew 22413911bf
Validation api changes (#1719)
* Validation enhancements

* Work on validation api reworking

* Keep working on validation API

* Keep working on new term API

* Work on validation api

* Ongoing work on validation

* Work on integrating validation

* Work on validation API

* Add to validation API

* Work on validation

* Work on API

* Work on validation

* Work on validation API

* Work on validation API

* Work on validation api

* Work on validation API

* Work on validation api

* Validation API changes

* Work on API

* More work on validationo API

* Work on validation API

* FIxes

* WOrk on validation api

* Work on validation API

* Tests passing!

* More cleanup

* More validation API changes

* Fix intermittent test failure

* Package reorg

* Validation API work

* Work on doocumentation

* Work on API

* More work on new validation API

* Fix errorprone-reported error

* Test fixes

* Documentation updates

* Documentation tweaks

* Work on API

* Bean name adjustments

* Build fixes

* Some test fixes
2020-03-17 13:28:59 -04:00
jamesagnew ddc7b601ee Version bump to 4.3.0-SNAPSHOT 2020-02-16 19:23:22 -05:00
jamesagnew 4fd80cfca7 Bump to 4.2.0 2020-02-16 19:00:15 -05:00
James Agnew ca620d652f
Add tests (#1606)
* Support chained HAS

* Add some tests

* Add some cleanup

* Work on intermittent tests
2019-11-24 10:11:49 +01:00
James Agnew 74159dcb26
Work on refactoring how PIDs work (#1580)
* Start work on refactoring how PIDs work

* Some test fixes

* Test fixes

* Test fixes

* Restore accidentally deleted line

* One more tweak

* Rework resource link extraction

* Test fix

* Split out transaction processor

* Updates

* Test fix

* Test fixes

* Test fixes

* Clean up LGTM warning

* Fix compile failure

* One more test fix

* Fix LGTM issue

* Add spot for metadata

* Add test logging

* Remove testing code

* More test logging

* Add some test logging

* Attempty to fix intermittent test failure

* Improve exception tracking

* Work on simplifying search param registry

* Fix compile

* Fix compile errors

* Fix two test bugs
2019-11-17 14:35:19 -05:00
James Agnew 251df0849d Add an element ID to testpage for testing 2019-11-13 15:43:15 -05:00
James Agnew 497a96ae68 Version bump for next round of development 2019-11-12 22:09:21 -05:00
jamesagnew f99ad981b5 Version bump to 4.1.0 2019-11-12 16:08:20 -05:00
jiaola 2bf63b1fd7 Enable R5 support in testpage-overlay 2019-10-31 08:18:21 -04:00
James Agnew 403a3d1889
Correct URI loading in testpage-overlay (#1565)
* Clean up tests

* Try to fix intermittent

* Fix URI issue

* Add changelog
2019-10-25 16:14:06 -04:00
James Agnew 0af79b84d9
Use webjars instead of including JS deps (#1551)
* Use webjars instead of including JS deps

* Add changelog
2019-10-21 07:22:55 -04:00
James Agnew 2725797610
Implement Terminology Delta Operations (#1536)
* Start refactoring terminology delta operations

* Work on delta operations

* Work on concept saving

* Split term services into smaller services

* Work on term delta operations

* Work on term svcs

* Work on term operations

* More work on delta uploader

* Add a test

* Wrk on term service

* Fix compile error

* Some refactoring

* Test fix

* Test fix

* Test fixes

* Test fix

* Test fixes

* Test fixes

* Work on delta

* Work on tests#

* Test fixes

* Improve resequencing logic

* Build test

* More testing

* More build testing

* More work on tests

* CHange test logging

* Fix term service PID issue

* Update src/changes/changes.xml

Co-Authored-By: Diederik Muylwyk <diederik.muylwyk@gmail.com>

* Address review comment

* Some cleanup

* Test fix

* Fix some tests

* Test fixes
2019-10-14 19:14:41 -04:00
James Agnew 1a2271f751
Merge branch 'master' into missing-date-fields-fix 2019-10-01 05:29:57 -04:00
James Agnew eddb98084d Move PreferReturnEnum back to original location to avoid regressions 2019-09-19 15:48:58 -04:00
James Agnew 30dfde645b Upgrade to Fontawesdome 5 and prevent uploading resources with binary
storage extensions
2019-09-19 05:28:05 -04:00
James Agnew 9997b02506 Add support for R5 in the terstpage overlay 2019-09-14 11:51:09 -04:00
Jafer Khan f532b2d96c Fixed issue of missing date fields in search forms 2019-09-05 13:42:27 +00:00
jamesagnew e1b43d811f Version bump to 4.1.0-SNAPSHOT 2019-08-14 14:06:06 -04:00
jamesagnew 3f22456b0f Bump version to 4.0.0 2019-08-14 11:06:26 -04:00
Gary Teichrow 5509e5c1df Tweaked a couple POM files for 2 sub-projects to stop the IDE from complaining on the builds. After these changes, the build went flawlessly.
The first change to hapi-fhir-testpage-overlay/pom.xml was to remove a redundant dependency to javax.annotation.
The second change to hapi-fhir-test-utilities/pom.xml was to add a <relativePath> tag to the <parent> tag so that the project could build.
2019-06-25 18:28:23 -04:00
James Agnew 50a8c66bf5 Version bump to 4.0.0-SNAPSHOT 2019-05-30 17:13:03 -04:00
jamesagnew 73aa53be8f Release 3.8.0 2019-05-30 16:50:04 -04:00
James Agnew 6b37525f2d
Clean up redundant dependencies (#1306)
* Remove a bunch of unneedd deps

* Test fix

* Disable useless test
2019-05-09 12:51:13 -04:00
James Agnew 64f57b9736 Fix broken R4 serrver 2019-05-05 09:12:26 -04:00
James Agnew c251b44590 Sanitize two more characters 2019-05-02 08:18:07 -04:00
James Agnew 8f41159eb1 Fix a potential security vulneability in the testpage overlay 2019-05-02 08:13:22 -04:00
James Agnew e6a6c22783 Bump a few project dependencies 2019-03-31 13:57:02 -04:00
James Agnew 0f8c8d18e2 Bump version to 3.8.0-SNAPSHOT 2019-02-06 20:02:28 -05:00
jamesagnew 207015c3af Version bump to 3.7.0 2019-02-05 21:36:38 -05:00
James Agnew 8beccab9ab Merge branch 'master' into test-openjdk-11 2019-01-09 10:48:57 -05:00
jamesagnew 4599a10180 Merge branch 'master' into test-openjdk-11 2018-12-23 14:19:59 -05:00
James Agnew 298cf96084 Two more thymeleaf fixes 2018-12-23 13:49:50 -05:00
James Agnew b8ae0e2f73 Adjust for thymeleaf security fix 2018-12-23 13:41:15 -05:00
James Agnew a0cb7edd08 Version bump a few dependencies 2018-12-22 20:13:03 -05:00
Ken Stevens 84a34eb3c9
Subscription module support (#1147)
* Reorganizing packages and dependencies to support standalone subscription running within a CDR container where all hapi modules are on the classpath.

Moved Subscription registry out of interceptor and introduced SubscriptionLoader

* Created ActiveSubscription and moved cache bits into it

* Moved ExecutorQueue stuff out into its own class

* Add test and supporting code to validate SubscriptionConstants.EXT_SUBSCRIPTION_RESTHOOK_DELIVER_LATEST_VERSION behaviour

* Added SubscriptionCheckingSubscriber

* Moved a few beans to @ComponentScan

* Replaced use of beanFactory with concrete factory classes

* Switched test to use subscribablechannel

* Added SubscriptionLoaderFhirClientTest

* Confirm that our SubscriptionProviderFhirClient works with a live fhir client

* Register interceptors with DaoConfig instead of RestServer.
Also, Rename @VisibleForTesting methods with ForUnitTest

* Fix triggering service so it uses new subscriptionmatcherinterceptor

* Renamed "Database" classes to "Dao"

* processing -> matching naming change
2018-12-18 13:09:06 -05:00
jamesagnew 3a3b81a6a8 Preparing things for OpenJDK 11 2018-12-08 17:52:48 -05:00
Ken Stevens 6baee4dc3f
Standalone subscription (#1125) 2018-11-30 17:19:16 -05:00
James Agnew 4fb81d5ee3 Adjust for spring5 in thymeleaf 2018-11-19 17:24:54 -05:00
James Agnew e45af1506c Update spring template 2018-11-16 11:20:21 +01:00
James Agnew 84acafe3af Streamline expunge operation 2018-11-15 11:37:16 +01:00
James Agnew 75210d614b Bump to 3.7.0-SNAPSHOT 2018-11-12 22:37:52 -05:00
James Agnew 63af04a7b4 Prepare for 3.6.0 release 2018-11-12 05:40:55 -05:00
James Agnew a0333a4767 Add one extra null check just in case 2018-10-15 15:19:06 -04:00
James Agnew ba6df6d55a Handle unqualified ID in delete box for testpage overlay 2018-10-15 10:23:21 -04:00
James Agnew 706e004b9d Bump to 3.6.0-SNAPSHOT 2018-09-19 10:24:48 -04:00
James Agnew daef975734 Version bump to 3.5.0 2018-09-08 07:22:21 +08:00
jamesagnew abcf7852b1 Tests pasing locally 2018-05-31 09:10:34 -04:00
Diederik Muylwyk 0e2c57fa60 Bumping version. 2018-05-28 17:44:38 -04:00
Diederik Muylwyk 2871920734 Preparing release. 2018-05-28 10:45:47 -04:00
jamesagnew 180336e076 Sync to master 2018-03-29 06:54:24 -04:00
jamesagnew 418e82032f Prep for 3.3.0 2018-03-29 05:48:13 -04:00
James Agnew 3b2930f8e9 Prevent a crash in testpage overlay when deleting a resource 2018-02-23 15:24:20 -05:00
jamesagnew 351a2fc2f1 Fix #837 - Use non-legacy content-type for plain json and xml accept
header
2018-02-02 06:43:19 -05:00
James Agnew 16038ece26 Version bump to 3.3.0-SNAPSHOT 2018-01-23 10:31:01 -05:00
James Agnew 6468ca474a Verion bump to 3.2.0 2018-01-13 02:14:33 -05:00
jamesagnew 5b909b4746 Version bump to 3.2.0-SNAPSHOT 2017-11-24 13:32:47 -05:00
jamesagnew 42dd34252d Version bump to 3.1.0 2017-11-23 13:27:21 -05:00
James 59975948b2 Test fixes 2017-10-22 21:56:44 -04:00
James b79dd75fce Update to Spring 5 2017-10-19 07:40:43 -04:00
James a782bd7630 Fix a number of problems reported by ErrorProne 2017-10-16 10:00:27 -04:00
James Agnew 9ca85b4cf3 Re-enable errorprone on standard hapi fhir build. woohoo! 2017-10-15 11:27:30 -04:00
James Agnew 87383ad802 Version bump to 3.1.0-SNAPSHOT 2017-09-27 21:23:34 -04:00
James 49bdaa1a45 Version bump to 3.0.0 2017-09-23 17:31:39 -04:00
James 265552989b Fix typos in testpage overlay 2017-08-20 08:37:51 -04:00
James 46c04488de Use correct verb for rest hook notifications 2017-08-19 19:14:52 -04:00
James 9e62d7dba9 CLI fixes and update some dependencies 2017-08-16 11:20:21 -04:00
James be5c5ebecd Merge in HAPI 3.0.0 working branch!
Squashed commit of the following:

commit 12f89a423a
Author: James <jamesagnew@gmail.com>
Date:   Sun Aug 13 14:38:51 2017 -0400

    Minimize validation resources

commit f6868cce5c
Merge: 3b80779fd3 1e158311d8
Author: James <jamesagnew@gmail.com>
Date:   Sun Aug 13 14:05:34 2017 -0400

    Forward port fix for #710

    Merge branch 'master' into hapi3_refactor

commit 3b80779fd3
Merge: 1f534985e8 356d9acaf7
Author: James <jamesagnew@gmail.com>
Date:   Sun Aug 13 12:31:09 2017 -0400

    Forward port #705, #708, and #710

    Merge branch 'master' into hapi3_refactor

commit 1f534985e8
Merge: 7c39a47852 dedd3d635b
Author: James <jamesagnew@gmail.com>
Date:   Sun Aug 13 10:52:59 2017 -0400

    Forward port #695

    Merge branch 'master' into hapi3_refactor

commit 7c39a47852
Merge: e0ffb84d21 6efafe62f1
Author: James <jamesagnew@gmail.com>
Date:   Sun Aug 13 09:53:17 2017 -0400

    Forward port #688

    Merge branch 'master' into hapi3_refactor

commit e0ffb84d21
Merge: 52388c11c1 d19b00ff09
Author: James <jamesagnew@gmail.com>
Date:   Sat Aug 12 14:59:46 2017 -0400

    Merge branch 'master' into hapi3_refactor

commit 52388c11c1
Author: James <jamesagnew@gmail.com>
Date:   Sat Aug 12 06:21:46 2017 -0400

    Cleanup

commit 209752cd63
Author: James <jamesagnew@gmail.com>
Date:   Thu Aug 10 11:18:19 2017 -0400

    Fix tests

commit 4543408dc8
Author: James <jamesagnew@gmail.com>
Date:   Sat Aug 5 06:55:50 2017 -0400

    Fix a potential deadlock

commit ee360f5376
Author: James <jamesagnew@gmail.com>
Date:   Sat Aug 5 06:22:06 2017 -0400

    Add R4 code to CLI

commit 1a95ba3b65
Author: James Agnew <jamesagnew@gmail.com>
Date:   Thu Aug 3 06:14:01 2017 -0400

    More cleanup

commit f0d8802681
Author: James <jamesagnew@gmail.com>
Date:   Wed Aug 2 11:27:43 2017 -0400

    Tests are working!

commit a4cbda357e
Author: James Agnew <jamesagnew@gmail.com>
Date:   Wed Aug 2 10:42:04 2017 -0400

    Connection handling cleanup for new tests

commit 0e2cecfbd0
Author: James Agnew <jamesagnew@gmail.com>
Date:   Wed Aug 2 10:16:28 2017 -0400

    Clean up R4 JPA tests

commit 40317a650d
Author: James <jamesagnew@gmail.com>
Date:   Wed Aug 2 09:12:38 2017 -0400

    Work on R4 for JPA server

commit e7f8f8c30d
Author: James <jamesagnew@gmail.com>
Date:   Tue Aug 1 20:43:47 2017 -0400

    More work on porting tests

commit 43c9003258
Author: James <jamesagnew@gmail.com>
Date:   Tue Aug 1 07:09:29 2017 -0400

    Work on porting DSTU1 tests

commit 602857f1e2
Author: James Agnew <jamesagnew@gmail.com>
Date:   Mon Jul 31 22:34:08 2017 -0400

    More work on bring unit tests up to date

commit e326a7b0cd
Author: James Agnew <jamesagnew@gmail.com>
Date:   Mon Jul 31 17:36:38 2017 -0400

    Credit for #686 and forward port the fix to R4 validator

commit 96543c3992
Merge: 3fb75aa61a 9901b802c4
Author: James Agnew <jamesagnew@gmail.com>
Date:   Mon Jul 31 17:12:33 2017 -0400

    Merge branch 'master' into hapi3_refactor

commit 3fb75aa61a
Author: James <jamesagnew@gmail.com>
Date:   Mon Jul 31 15:21:30 2017 -0400

    More work on cleanup

commit b02fbb6804
Author: James Agnew <jamesagnew@gmail.com>
Date:   Sun Jul 30 22:11:07 2017 -0400

    Work on porting STU1 tests

commit 1ae37b0db3
Author: James Agnew <jamesagnew@gmail.com>
Date:   Sun Jul 30 20:56:10 2017 -0400

    Try to get coverage report working

commit 72b88849b3
Author: James Agnew <jamesagnew@gmail.com>
Date:   Sun Jul 30 20:27:02 2017 -0400

    Fix android tests

commit e5f6c35aea
Author: James <jamesagnew@gmail.com>
Date:   Sun Jul 30 19:31:18 2017 -0400

    More work on getting legacy code cleaned up

commit 0b513b0845
Author: James <jamesagnew@gmail.com>
Date:   Sun Jul 30 18:41:13 2017 -0400

    Continue work on removing deprecated API

commit defea69aa3
Author: James Agnew <jamesagnew@gmail.com>
Date:   Sun Jul 30 17:10:01 2017 -0400

    More cleanup of legacy code

commit 9ae7295705
Author: James <jamesagnew@gmail.com>
Date:   Sun Jul 30 07:11:45 2017 -0400

    More cleanup of legacy code

commit ebd3eeb5ee
Author: James Agnew <jamesagnew@gmail.com>
Date:   Sun Jul 30 06:43:25 2017 -0400

    More work on removing legacy code

commit 92224c2532
Author: James <jamesagnew@gmail.com>
Date:   Sat Jul 29 18:44:06 2017 -0400

    Remove DSTU1 Bundle

commit c52cacf71b
Author: James <jamesagnew@gmail.com>
Date:   Sat Jul 29 14:27:42 2017 -0400

    Now compiling

commit b405e51773
Merge: c3ddf04e25 cb2cea54d7
Author: James Agnew <jamesagnew@gmail.com>
Date:   Fri Jul 28 06:21:02 2017 -0400

    Merge branch 'master' into hapi3_refactor

commit c3ddf04e25
Author: James <jamesagnew@gmail.com>
Date:   Thu Jul 27 11:06:06 2017 -0400

    Sync R4 releases in

commit b13333c3c0
Author: James <jamesagnew@gmail.com>
Date:   Fri Jul 14 05:52:33 2017 -0400

    JPA server is now able to handle placeholder IDs (e.g. urn:uuid:00....000) being used in Bundle.entry.request.url as a part of the conditional URL within transactions.

commit 2e60ff7521
Author: James Agnew <jamesagnew@gmail.com>
Date:   Thu Jul 13 20:02:46 2017 -0400

    Fix imports

commit a92ace2e0d
Merge: 3196db96d1 1a6b3ea867
Author: James Agnew <jamesagnew@gmail.com>
Date:   Thu Jul 13 12:02:27 2017 -0400

    Merge branch 'master' into hapi3_refactor

commit 3196db96d1
Author: James Agnew <jamesagnew@gmail.com>
Date:   Thu Jul 13 11:48:10 2017 -0400

    Don't add false paging link to request

commit bd4e1d3388
Author: James <jamesagnew@gmail.com>
Date:   Sun Jul 9 21:32:16 2017 -0400

    Finally building correctly!

commit 6464ce9304
Author: James <jamesagnew@gmail.com>
Date:   Sun Jul 9 16:38:28 2017 -0400

    Work on refactor

commit 0059f2e48e
Author: James <jamesagnew@gmail.com>
Date:   Sat Jul 8 07:16:20 2017 -0400

    Keep working on refactor

commit 6c2e87e8cc
Author: James Agnew <jamesagnew@gmail.com>
Date:   Thu Jul 6 22:35:13 2017 -0400

    Lots of work on refactor

commit 11cab97504
Merge: 34ec6b8807 6c47bd4c51
Author: James Agnew <jamesagnew@gmail.com>
Date:   Thu Jul 6 21:43:57 2017 -0400

    Merge branch 'master' into hapi3_refactor

commit 34ec6b8807
Merge: f8e647511b c520e60ac1
Author: James Agnew <jamesagnew@gmail.com>
Date:   Thu Jul 6 21:43:49 2017 -0400

    Merge branch 'hapi3_refactor' of github.com:jamesagnew/hapi-fhir into hapi3_refactor

commit f8e647511b
Author: James Agnew <jamesagnew@gmail.com>
Date:   Thu Jul 6 18:46:55 2017 -0400

    Work on hapi3 changes

commit c520e60ac1
Author: James <jamesagnew@gmail.com>
Date:   Wed Jul 5 08:08:40 2017 -0400

    Keep working on refactor

commit f1d2ee9092
Author: James Agnew <jamesagnew@gmail.com>
Date:   Mon Jul 3 22:10:59 2017 -0400

    Continue refactor for HAPI 3

commit 9281ccafc3
Merge: ea1264cd8e 294d080bd3
Author: James Agnew <jamesagnew@gmail.com>
Date:   Mon Jul 3 20:34:16 2017 -0400

    Merge branch 'master' into hapi3_refactor

commit ea1264cd8e
Author: James <jamesagnew@gmail.com>
Date:   Wed Jun 28 10:26:01 2017 -0400

    Continue work on refactor

commit fbe2f98a02
Merge: b2bef47100 0a4dcc32ec
Author: James <jamesagnew@gmail.com>
Date:   Wed Jun 28 06:21:22 2017 -0400

    Merge branch 'master' into hapi3_refactor

commit b2bef47100
Author: James <jamesagnew@gmail.com>
Date:   Tue Jun 27 21:13:23 2017 -0400

    Work on refactor

commit 8f76e4e463
Author: James Agnew <jamesagnew@gmail.com>
Date:   Sun Jun 25 21:55:35 2017 -0400

    Lots of work on refactoring
2017-08-13 14:39:47 -04:00
David Conlan 393207d940 Add qualifiers for token search, fix javascript bug for selecting text qualifier 2017-08-01 10:15:24 +10:00
Diederik Muylwyk d4fcf46ded Removed annoying stacktrace from logs for failed conformance statements. (#692)
* Removed annoying stacktrace from logs for failed conformance statements.

* Minor tweak for consistency with slf4j.
2017-07-13 18:29:12 -04:00
Diederik Muylwyk d7714c6372 Added a hook so subclasses of BaseController can customize error messages. (#691) 2017-07-13 14:05:19 -04:00
James Agnew 6c47bd4c51 Support transaction in testpage overlay 2017-07-05 20:25:06 -04:00
James 14edc79ac1 Version bump to 2.6-SNAPSHOT 2017-06-09 07:28:29 -04:00
James 8b5209ff67 Version bump to 2.5 2017-06-08 06:34:44 -04:00
James e2b329382a Add some logging to searches 2017-05-25 08:31:29 -04:00
James 6764079129 Bugfixes to the testpage overlay 2017-05-22 16:15:51 -04:00
James 235bdcc4fc Add testing hooks to testpage overlay 2017-05-19 10:11:11 -04:00
James 5ac91bfb94 Add a test for custom params 2017-05-17 08:19:11 -04:00
James Agnew 48520832ef Doc updates and allow DSTU3 resources in some annotations that
previously didn't allow it
2017-05-14 22:03:38 -04:00
James da2d7c3bc3 Clean up testpage overlay 2017-05-14 11:27:52 -04:00
James 0d92d95fd6 Fix bad dependency 2017-05-14 07:01:44 -04:00
James Agnew 897c65e818 CLI and HttpClient cleanup 2017-05-14 06:39:23 -04:00
James cbc652d226 Version bump to 2.5-SNAPSHOT 2017-04-20 16:13:15 -04:00
James 9d3d15ce6f Version bump to 2.4 2017-04-19 21:38:36 -04:00
James Agnew 8e4e252daf Merge pull request #617 from elnin0815/master
removed unnecessary whitespaces from textareas
2017-04-17 17:53:48 -04:00
Patrick Werner 61f35deac1 removed unnecessary whitespaces from textareas, placeholder is now displayed correctly. 2017-04-06 11:59:19 +02:00
James Agnew 6ab1cb4c2e Fix compile issues from new version of errorprone 2017-04-03 14:43:59 -04:00
James 40848b1beb Version bump to 2.4-SNAPSHOT 2017-03-18 12:24:39 -04:00
James e18ab206d7 Version bump to 2.3 2017-03-17 21:21:59 -04:00
James 8758b6f3da Updating to 1.9.0 structures
Squashed commit of the following:

commit 81edf46fe02a88851693f958e60855edfe69c04c
Author: James Agnew <jamesagnew@gmail.com>
Date:   Fri Mar 17 21:05:22 2017 -0400

    Work on converter

commit 3342d987008892dd3a75dddd251fe599c31c5a6c
Author: James <jamesagnew@gmail.com>
Date:   Fri Mar 17 08:40:37 2017 -0400

    Site updates

commit 7dcb63904ece1fcb59a09dc268e8382ac0b75535
Author: James <jamesagnew@gmail.com>
Date:   Fri Mar 17 08:36:39 2017 -0400

    STU3 structs working!

commit c5aec809e3f19f3fedf0aaaeab8cdd7924c144a2
Author: James <jamesagnew@gmail.com>
Date:   Fri Mar 17 07:05:54 2017 -0400

    Format test

commit 5033090010e8c93644505bccaa5e41ccbd756485
Author: James <jamesagnew@gmail.com>
Date:   Fri Mar 17 07:03:39 2017 -0400

    Merge tests for STU3

commit de40a516bfa4d2ab7f5e28e2d95815fde68bd10a
Merge: d5a5a60 899ed25
Author: James <jamesagnew@gmail.com>
Date:   Fri Mar 17 06:59:20 2017 -0400

    Merge branch 'master' into dstu3_latest_structs

commit d5a5a601b53d8be6712f0bfe37ba7e6eb4d3ce58
Author: James <jamesagnew@gmail.com>
Date:   Tue Mar 14 12:04:37 2017 -0400

    Latest fixes

commit ae46ad53d2075e66e3c58c1e626652b4e144f20c
Author: James <jamesagnew@gmail.com>
Date:   Tue Mar 14 06:51:59 2017 -0400

    STU3 structs passing

commit ec3b62d31131d303001f8574c58fb7a8b8194f68
Author: James Agnew <jamesagnew@gmail.com>
Date:   Sun Mar 12 22:20:05 2017 -0400

    Fix some tests

commit 933f9b08c32dd8671638f406a0966c5ee07d86a1
Author: James Agnew <jamesagnew@gmail.com>
Date:   Sun Mar 12 21:18:03 2017 -0400

    Fix test

commit 2a3ad0b422f58cfffea966a7005c6a3d86d189da
Author: James Agnew <jamesagnew@gmail.com>
Date:   Sun Mar 12 21:07:33 2017 -0400

    Resolve compile issues in STU3

commit fe04eba312a42c74b10a3971e4d61d58ba003bf9
Author: James Agnew <jamesagnew@gmail.com>
Date:   Sun Mar 12 20:51:35 2017 -0400

    FIx compilation error

commit 6c63a558c97cf176105967a84a0b32472c6c0fcb
Author: James Agnew <jamesagnew@gmail.com>
Date:   Sun Mar 12 20:48:13 2017 -0400

    Another STU3 struct fix

commit 6acd25458aad89aaff94768c824d4d1fcdac97ba
Author: James Agnew <jamesagnew@gmail.com>
Date:   Sun Mar 12 20:41:16 2017 -0400

    Work on STU3 structs

commit 90a476dba2665a129572ad5cbbd8dd29afd9d4c8
Author: James Agnew <jamesagnew@gmail.com>
Date:   Sun Mar 12 20:28:32 2017 -0400

    Resolve JDK8 dependencies

commit 783bc1519971e977fe7139aa1d3a2e7f37940a63
Author: James Agnew <jamesagnew@gmail.com>
Date:   Sun Mar 12 20:20:57 2017 -0400

    Fix some tests

commit 60c379175b689495e65278bb6a237af3de379aa8
Author: James <jamesagnew@gmail.com>
Date:   Sun Mar 12 19:56:29 2017 -0400

    Work on STU3 structs

commit e98c2eed6601f7009e199aca3b82399a3377077c
Author: James <jamesagnew@gmail.com>
Date:   Sun Mar 12 19:41:48 2017 -0400

    Work on DSTU3 structures

commit 3ce909212bf0f11561b8342d406cffcf957afeb3
Author: James <jamesagnew@gmail.com>
Date:   Tue Mar 7 21:03:14 2017 -0500

    Work up upgrading structs
2017-03-17 21:06:12 -04:00
sekaijin a150a96089 dependencies convergence
correct dependencies convergence
correct version use ${project.version}
2017-01-29 19:22:28 +01:00
sekaijin 23784c1619 remove .settings .project .classpath file of eclipse 2017-01-28 17:13:47 +01:00
James b448e13edd Version bump to 2.3 2016-12-20 19:01:31 -05:00
James 0ec61533a8 Publish 2.2 2016-12-20 19:00:37 -05:00
James 2a94242f22 Fix web testing UI to handle CapabilityStatement correctly 2016-12-19 14:32:48 -05:00
James Agnew 72653a9ec4 Fix #500 - Next and previous links not working in testpage UI 2016-12-08 10:45:47 -05:00
James ca602bdc1e Fix compile error 2016-11-22 06:35:31 -05:00
James 2d7592f7a8 Version bump to 2.2-SNAPSHOT 2016-11-11 22:39:45 -05:00
James 2dd26b6367 Version bump to 2.1 2016-11-11 15:16:53 -05:00
James Agnew 202a1ea885 Fix web testing UI regression 2016-09-06 17:59:04 -04:00
James Agnew 906bcfb803 Version bump to 2.1 2016-08-30 10:55:55 -04:00
James Agnew d27aad487e Bump to 2.0 release 2016-08-30 10:50:04 -04:00
James Agnew 3ed197e0fe Fix #431 - Regressions to testing UI caused by Thymeleaf upgrade 2016-08-29 19:11:41 -04:00
James Agnew c4d302df8d Upgrade to Thymeleaf 3 2016-08-23 19:11:49 -04:00
jamesagnew 6aa7aed3cf Fix compile issue 2016-08-01 22:18:23 -04:00
James Agnew 748c13d0dc Remove bad dependency 2016-07-22 18:33:16 -04:00
jamesagnew 5b46e9655a Fix compile errors 2016-07-13 07:59:08 -04:00
jamesagnew fa37afb61f Merge branch 'master' of github.com:jamesagnew/hapi-fhir 2016-07-12 21:44:52 -04:00
jamesagnew ed941a116b Update to use GSON 2016-07-12 21:44:40 -04:00
James Agnew c3e9f618eb Version bump to 2.0-SNAPSHOT 2016-07-12 11:12:07 -04:00
jamesagnew acaf2135c5 Finalize 1.6 release 2016-07-06 07:29:20 -04:00
James Agnew eabf0039ba Merge branch 'term_svc' 2016-05-24 10:18:08 -04:00
James Agnew e1513a6060 Allow transactions to be posted in web ui for DSTU3 2016-05-24 10:03:19 -04:00
jamesagnew 831729b558 Add test data library endpoints to public server 2016-05-22 14:28:17 -04:00
James Agnew af2b702aa4 Fixes from Montreal connectathon 2016-05-07 14:24:33 -04:00
jamesagnew 38e80531bb Bump version to 1.6-SNAPSHOT 2016-04-22 07:05:05 -04:00
James Agnew 88157fe1a6 Test data uploader fixes 2016-04-08 16:31:42 -04:00
James Agnew 8de41ca8b4 Attempting to reduce memory usage during tests 2016-03-06 14:38:18 -05:00
jamesagnew 0ea8457a00 Fix VRead in web testing UI 2016-03-02 22:35:17 -05:00
jamesagnew 4573b86972 Add tests for #275 2016-03-01 07:34:11 -05:00
jamesagnew c44b23f493 Fix #280 - Don't leave web testing UI buttons disabled when you return to a page via the back button 2016-03-01 07:15:02 -05:00
jamesagnew 1da5855c9c Add Eclipse files to git 2016-02-28 14:02:29 -05:00
petervanhoute f8ea639af9 Merge remote-tracking branch 'remotes/petervanhoute/jax-rs-client': inclusion of jaxrs client by addition of interfaces around the apache client classes 2016-02-24 18:04:49 +01:00
James Agnew f21851099c Version bump 2016-02-08 13:59:09 -05:00
James Agnew e0e52f96c6 Version bump to 1.4 (finally!) 2016-02-03 15:25:32 -05:00
jamesagnew 32daeb6f58 Switch DSTU2.1 to DSTU3 per FMB's decision 2016-02-01 08:55:58 -05:00
jamesagnew 944afc2785 Add better constructors for date types 2016-01-20 07:40:57 -05:00
James Agnew 589059256f Correct issues uncovered during connectathon 2016-01-11 07:42:13 -05:00
petervanhoute b6d3a003d3 move client api-classes into api package 2016-01-08 11:47:00 +01:00
petervanhoute 1271c36d1b create a jax-rs client 2016-01-08 10:50:04 +01:00
James Agnew c1afb4f54d Get overlay working for DSTU2.1 2016-01-07 15:04:56 -05:00
jamesagnew 56620eebfb Clean up testpage-overlay to work with DSTU2.1 2016-01-06 08:49:24 -05:00
James Agnew 2e434650ea Fixed to testpage overlay for DSTU2.1 2016-01-05 17:02:37 -05:00
James Agnew 7005cd52d9 Performance tweaks to the validator and get the DSTU2.1 endpoint working
with validation
2016-01-04 17:57:00 -05:00
jamesagnew c8365ab566 Fix build 2016-01-01 23:18:44 -05:00
James Agnew 2f12c9ed01 Bump version to 1.4-SNAPSHOT 2015-11-15 20:11:05 -05:00
James Agnew f9f33f059b Version bump to 1.3 2015-11-15 12:53:02 -05:00
Sam Lanfranchi dba8a35349 fixed first server ignored in test overlay 2015-10-21 16:11:57 +02:00
James Agnew ae416dcd62 Improve nexted search/read handing in transactions in JPA server 2015-10-20 10:35:18 -04:00
jamesagnew 938a251ae9 Cleanup tests for java config in JPA 2015-10-19 20:19:40 -04:00
jamesagnew 9c0f6f993d Finish converting Spring from XML to Java config 2015-10-17 09:39:27 -04:00
James Agnew 80575b5380 Generic client now allows search by URL 2015-10-05 15:30:30 -04:00
jamesagnew c385384269 More work on subscriptions 2015-09-30 08:31:38 -04:00
jamesagnew a15ed8e944 Work on subscriptions, and correct an issue with DateRangeParam where comparators get ignored 2015-09-23 08:36:11 -04:00
jamesagnew 04c2cce13f Start working on JPA subscriptions 2015-09-21 09:08:19 -04:00
jamesagnew 8fee057de3 Bump Spring and Hibernate versions 2015-09-20 10:18:33 -04:00
jamesagnew 70e942e9f8 Version bump to 1.3-SNAPSHOT 2015-09-19 11:00:57 -04:00
jamesagnew 31934ff582 Version bump to 1.2 2015-09-16 07:09:03 -04:00
James Agnew 97e6073665 Support URI (and prepare for lat/lon search params) in JPA server, and
don't store duplicate tags
2015-09-01 17:02:35 -04:00
jamesagnew a9f978a8a2 Udate to latest DSTU2 definitions 2015-08-31 08:20:24 -04:00
James Agnew d6540a9759 Merge pull request #211 from pukkaone/tester-client-factory
FHIR Tester application use configured client factory
2015-08-25 07:46:17 -04:00
James Agnew 83a57f8e7c Auto qualify resource IDs 2015-08-24 18:21:34 -04:00
Chin Huang 2f6aa4d272 Create client from configured client factory
In the FHIR Tester application, actually use the client factory property
configured in the tester configuration.
2015-08-24 15:01:47 -07:00
jamesagnew 44ac164eca Work on #125 - Support _summary and _elements 2015-08-23 13:29:57 -04:00
James Agnew 11f5aeebd9 Clean up the build and hopefully close #206 2015-08-19 11:49:00 -04:00
jamesagnew e8730b6e47 POM cleanup 2015-07-21 08:59:44 -04:00
James Agnew 901c5c29cf Version bunp for 1.2 2015-07-14 18:08:06 -04:00
James Agnew 3fa7c54526 Tag 1.1 release 2015-07-13 10:31:02 -04:00
jamesagnew 0f74db0acd Fix build 2015-07-05 17:33:27 -04:00
James Agnew 6f7ef96b97 Support $validate operation correctly in DSTU2 clients and in testpage
overlay
2015-06-16 11:56:30 -04:00
James Agnew 6077114b32 Merge branch 'master' of github.com:jamesagnew/hapi-fhir 2015-06-11 14:24:58 -04:00
James Agnew f40955c2cb Remove dependency on ServletInputStream 2015-06-11 14:24:40 -04:00
jamesagnew 4ab8871a41 POM cleanup 2015-06-09 08:22:46 -04:00
jamesagnew 8f27462db7 Add support for _revinclude in web tester UI 2015-05-31 17:31:04 -04:00
jamesagnew 0f2976358f Version bump to 1.1-SNAPSHOT with more loggging 2015-05-08 08:54:40 -04:00
jamesagnew a731557516 Merge branch 'hl7org_structs' of github.com:jamesagnew/hapi-fhir into hl7org_structs 2015-05-07 21:28:31 -04:00
jamesagnew dfbe2415d1 Merge branch 'master' of github.com:jamesagnew/hapi-fhir into hl7org_structs 2015-05-07 21:24:34 -04:00
jamesagnew 924ebf062e Preparing for 1.0 release 2015-05-07 20:51:37 -04:00
James Agnew 05cccdb6e5 More work on structs 2015-05-05 13:16:10 -04:00
James Agnew aa2f2cee96 Merge branch 'hl7org_structs' of github.com:jamesagnew/hapi-fhir into hl7org_structs 2015-05-01 13:52:24 -07:00
James Agnew 9755ae8d35 Merge branch 'master' of github.com:jamesagnew/hapi-fhir into hl7org_structs 2015-05-01 10:24:15 -04:00
James Agnew b68ce95b3f Fix #36 - Allow removal of extensions 2015-04-28 13:58:22 -04:00
James Agnew 3a1cc48048 Fix broken unit test and allow invalid dates in web testewr UI 2015-04-28 10:33:14 -04:00
jamesagnew f8dee1f47a Merge branch 'master' of github.com:jamesagnew/hapi-fhir into hl7org_structs 2015-04-24 09:05:34 -04:00
James Agnew 7db7097e25 Fix #162 - Allow web testing UI to configure the client 2015-04-23 17:52:51 -04:00
James Agnew 8072ca1bc1 Do HTTP post for tester UI create/updates 2015-04-23 16:57:50 -04:00
jamesagnew 147305b70e More work on getting HL7org structs working 2015-04-22 07:46:33 -04:00
jamesagnew b222b76611 Merge branch 'master' of github.com:jamesagnew/hapi-fhir into hl7org_structs
Conflicts:
	hapi-fhir-android/pom.xml
	hapi-fhir-base/src/main/java/ca/uhn/fhir/parser/JsonParser.java
	hapi-fhir-base/src/main/java/ca/uhn/fhir/parser/XmlParser.java
	hapi-fhir-base/src/main/java/ca/uhn/fhir/rest/server/RestfulServerUtils.java
	hapi-fhir-base/src/main/java/ca/uhn/fhir/util/FhirTerser.java
	hapi-fhir-testpage-overlay/.gitignore
	src/changes/changes.xml
2015-04-21 13:30:58 -04:00
James Agnew 4f1d2a3c75 Merging cleanup from local branch with commit from #153 2015-04-20 15:28:20 -04:00
James Agnew 89519faa6f Just add some unit tests 2015-04-20 12:07:52 -04:00
James Agnew b42737262b Work on HL7org structs 2015-04-20 07:31:45 -04:00
James Agnew c484425c78 Update license file generation and gitignores 2015-03-26 11:57:07 -04:00
jamesagnew 986094617a Fix #135 - Remove Eclipse and IntelliJ artifacts from version control 2015-03-26 07:56:24 -04:00
jamesagnew 577f26cb74 Version bump a few dependencies 2015-03-17 08:11:42 -04:00
jamesagnew 43e2cd1653 Version bump to 1.0-SNAPSHOT 2015-03-16 09:06:53 -04:00
jamesagnew 3c6febb668 Preparing for 0.9 release 2015-03-13 08:34:52 -04:00
James Agnew 16857404c5 Just work on examples of new functionality 2015-03-11 16:17:27 -04:00
James Agnew b4911788a3 Add sorting to Web Testing UI 2015-03-11 11:15:51 -04:00
James Agnew 9a9501c53f JPA demo enhancements and site work 2015-03-10 17:56:55 -04:00
James Agnew 1fec2d0d67 -Accept content type of "application/fhir+xml" as XML encoding
-Correctly handle back button in testing UI for Firefox searches
2015-03-09 13:35:21 -04:00
jamesagnew 5fd987c497 Work on sort support in JPA 2015-03-09 08:01:13 -04:00
jamesagnew 06ea9a1453 More work on operation support for DSTU2 2015-03-06 17:55:35 -05:00
jamesagnew 7905e9d918 Add support for quantity search params in tester UI 2015-03-06 09:53:50 -05:00
jamesagnew 4f93ab9313 Work on JPA Transaction for DSTU2 2015-02-18 22:23:46 -05:00
jamesagnew 54be2634cd Work on #105 - Should have it working 2015-02-16 22:37:47 -05:00
esteban-aliverti 9377315c8d Misc:
- hapi-fhir-testpage-overlay now uses dstu2 classes.
	- hapi-fhir-jpaserver-examples now use dstu2 classes.
	- Removed non-existing dependency hapi-fhir-jpaserver-test:0.9-SNAPSHOT from hapi-fhir-testpage-overlay and hapi-fhir-jpaserver-uhnfhirtest
2015-02-09 12:00:49 +01:00
James Agnew 0b726c3564 Fix compile issues 2015-02-06 16:41:34 -05:00
James Agnew a474870a1e Work on JPA example 2015-02-03 17:53:22 -05:00
James Agnew a3be361e40 Add some tests for #82 - Not working, but we have tests at least 2015-01-29 14:37:55 -05:00
jamesagnew f7f1671468 Start work on JPA example project 2015-01-27 21:56:32 -05:00
James Agnew 0b44a32910 Fix #69 2014-12-29 17:20:34 -05:00
James Agnew 81851f4808 Fix #65 - Correctly parse and encode extensions on non-repeatable
primitive fields
2014-12-23 14:10:53 -05:00
jamesagnew 994e49057d Lots of work on DSTU2 server 2014-12-21 18:13:37 -05:00
jamesagnew 1f3991caf9 Bump version to 0.9-SNAPSHOT 2014-12-17 17:04:10 -05:00
jamesagnew 3963bb68e8 Merge remote-tracking branch 'origin/master' into hl7org_structs
Conflicts:
	hapi-fhir-base/src/main/java/ca/uhn/fhir/model/api/IFhirVersion.java
	hapi-fhir-structures-dstu/src/main/java/ca/uhn/fhir/model/dstu/FhirDstu1.java
2014-12-17 16:08:59 -05:00
jamesagnew 7e8f81293e Tagging and deploying 0.8 2014-12-17 14:22:10 -05:00
James Agnew 551ffb43b4 More work on DEV operations 2014-12-15 17:41:24 -05:00
jamesagnew ebd0f222f4 Remove artifacts from merge 2014-12-13 13:03:38 -05:00
jamesagnew c294e1c064 Begin multi version work 2014-12-01 08:13:32 -05:00
jamesagnew 450b270c00 Fix compile issues in previous merge 2014-11-08 11:18:04 -05:00
jamesagnew d1fb878c55 Merging 2014-11-08 10:36:27 -05:00
jamesagnew 818177f70f Bunp to 0.7 for release 2014-10-23 08:12:58 -04:00
James Agnew 751face0a6 Argh. Fix to 0.7-SNAPSHOT, not 0.6-SNAPSHOT 2014-09-30 13:16:09 -04:00
James Agnew 1feb69b545 Revert to 0.6-SNAPSHOT version 2014-09-30 11:59:38 -04:00
t106uhn 686237f970 bump to 0.8-SNAPSHOT 2014-09-26 20:50:36 -04:00
James Agnew cdd4b137fb Bump to 0.7-SNAPSHOT 2014-09-11 16:57:45 -04:00
James Agnew 0b6c985f3a Merge branch 'oauth2'
Conflicts:
2014-09-11 16:29:08 -04:00
jamesagnew 13dd6d5e11 Complete 0.6 2014-09-08 07:41:44 -04:00
James Agnew 6761e9a945 Starting to rework the oauth2 filter 2014-09-04 18:03:19 -04:00
James Agnew 794db6a141 Document interceptor framework 2014-08-26 18:18:00 -04:00
James Agnew f5823a8e2f Server logging interceptor enhancements 2014-08-26 16:10:27 -04:00
jamesagnew ab17c9f3d1 Let server return profile info if configured to do so 2014-08-21 00:34:19 -04:00
jamesagnew d5c6623da0 Start adding ability to override fields in extended definition classes 2014-08-15 09:19:07 -04:00
jamesagnew 9ef670aae9 Start getting sorting into fhirtest 2014-08-12 08:00:24 -04:00
jamesagnew e2b9b3318d Add OperationOutcome narrative template 2014-08-11 09:09:01 -04:00
James Agnew b43b6c6d2f Fix #6: Allow update operation to create a resource if it doesn't
already exist
2014-08-08 14:07:03 -04:00
James Agnew f29349f537 Improve conformance provider documentation 2014-08-05 13:15:08 -04:00
James Agnew ef10560c76 Version bump to 0.6-SNAPSHOT 2014-07-30 11:58:06 -04:00
jamesagnew 67fb593146 Finalize 0.5 2014-07-29 22:26:19 -04:00
jamesagnew 0bc703107c Add suport for composite and sorting to JPA (not yet complete) 2014-07-29 09:10:25 -04:00