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7019 Commits

Author SHA1 Message Date
vedion e4214a4cbe
Exposing hasIncludes PersistedJpaBundleProvider (#2047) 
Co-authored-by: ahn <anders.havn@systematic.com>
 2020-10-12 17:37:12 -04:00
jamesagnew bd6feec2f4 Initial credit for #2118 2020-10-12 17:19:15 -04:00
Josh Collins 844624b6dd
RDF Support in HAPI FHIR (#2118) 
* RDF Support in HAPI FHIR

* Ability to read/write FHIR resources as RDF (turtle serialization)
* Test suite to test roundtrip-ability of RDF parser

* Add null checks to appease LGTM

* Correct null check logic
 2020-10-12 17:16:00 -04:00
Oliver Egger 3297e50815
make invoke available for derived classes (#2125) 2020-10-12 17:07:27 -04:00
jamesagnew 3ba80de717 Add to date equals comparison 2020-10-11 15:35:28 -04:00
jamesagnew 81d7a1eae1 Credit for #2112 2020-10-11 15:29:06 -04:00
Oliver Egger 8294b8ddb6
add namespace, prefix for attributes (xml:lang) (#2112) 2020-10-11 15:25:37 -04:00
jamesagnew 576f6efc39 Credit for #1607 2020-10-09 11:58:00 -04:00
abrsystematic cad3ba5a66
Fix gettimezone performanceissue (#1607) 
* [(release_3_7_SSE)] cache timezone since timezone.gettimezone is static synchronized and performs poorly

* [(fixgettimezoneperformanceissue)] fiximport
 2020-10-09 11:51:50 -04:00
Tadgh d5b533c73c
Merge pull request #2123 from jamesagnew/gg_20201008_baddeps 
Update hibernate core and validator
 2020-10-09 09:06:38 -04:00
jamesagnew e8d844f4f3 Merge branch 'master' into gg_20201008_baddeps 2020-10-09 07:53:19 -04:00
James Agnew 2134d40f1c
Account for timezones in lastUpdated search (#2113) 
* Add test

* Fix

* Add changelog

* Test fixes

* Test fix

* Test fixes

* Resolve fixme

* Test fixes

* Remove debug logs

* Try to get CI tests passing again
 2020-10-09 07:52:46 -04:00
Tadgh cbfadd427f Merge branch 'master' into gg_20201008_baddeps 2020-10-08 18:40:44 -04:00
Tadgh 375552ac49 Update hibernate core and validator 2020-10-08 14:15:57 -04:00
IanMMarshall a44037daf3
Merge pull request #2122 from jamesagnew/im_20201007_conceptmap_sourcesystemversion 
Fixed loader so that it now sets source system version for ConceptMap…
 2020-10-08 14:04:49 -04:00
James Agnew d2aae361bf
Rewrite deferred interceptor callback framework (#2121) 
* Rewrite deferred interceptor callback framework

* Improve deferred handling

* Null guard

* Test fix
 2020-10-07 20:08:18 -04:00
ianmarshall 476eba676e Fixed loader so that it now sets source system version for ConceptMap resources. 2020-10-07 15:07:25 -04:00
IanMMarshall ebbdafb107
Merge pull request #2120 from jamesagnew/im_20201005_loincpartlink_fix 
Im 20201005 loincpartlink fix
 2020-10-07 12:07:23 -04:00
Tadgh f85f7c0237
Merge pull request #2117 from jamesagnew/gg_20201006_dep_update 
Update dependencies
 2020-10-07 11:13:45 -04:00
ianmarshall 46b2fde1db Fixed tests to accommodate suggested changes from code review. 2020-10-07 11:07:34 -04:00
IanMMarshall 1bac646dc3
Update hapi-fhir-jpaserver-base/src/main/java/ca/uhn/fhir/jpa/term/LoadedFileDescriptors.java 
Co-authored-by: Diederik Muylwyk <diederik.muylwyk@gmail.com>
 2020-10-07 11:01:54 -04:00
IanMMarshall e24e233ec6
Update hapi-fhir-jpaserver-base/src/main/java/ca/uhn/fhir/jpa/term/LoadedFileDescriptors.java 
Co-authored-by: Diederik Muylwyk <diederik.muylwyk@gmail.com>
 2020-10-07 11:01:47 -04:00
ianmarshall 0f39eeb0e9 Bug fix and test improvements. 2020-10-06 21:22:09 -04:00
Tadgh f347f95f85 rollback elastic 2020-10-06 19:04:10 -04:00
Tadgh 47207e11d1 Merge branch 'gg_20201006_dep_update' of github.com:jamesagnew/hapi-fhir into gg_20201006_dep_update 2020-10-06 17:20:33 -04:00
Tadgh 5a29fd9945 rollback the elastic changes 2020-10-06 17:20:11 -04:00
ianmarshall f044f9c47e Merge remote-tracking branch 'origin/master' into im_20201005_loincpartlink_fix 2020-10-06 14:55:57 -04:00
ianmarshall d9841e59ac Restore ability to load LOINC PartLink data from a single file for pre-2.68 versions. 2020-10-06 14:36:23 -04:00
Tadgh bac43d480f Update dependencies 2020-10-06 14:14:17 -04:00
jamesagnew edbd089092 Docs update 2020-10-06 05:52:22 -04:00
IanMMarshall ce54d28a23
Merge pull request #2116 from jamesagnew/im_2020_09_29_term_doc_updates 
Im 2020 09 29 term doc updates
 2020-10-05 16:24:17 -04:00
IanMMarshall 5ec1284b8a
Apply suggestions from code review 
Edits per code review.

Co-authored-by: Diederik Muylwyk <diederik.muylwyk@gmail.com>
 2020-10-05 15:14:39 -04:00
ianmarshall 30e50ba90c Improvements to terminology documentation. 2020-10-05 14:08:29 -04:00
ianmarshall 4ca739e223 Improvements to terminology documentation. 2020-10-05 12:02:01 -04:00
ianmarshall 03bd94462d Fix typo in changelog. 2020-10-05 10:13:08 -04:00
ianmarshall 2258d37283 Documentation for terminology. 2020-10-05 09:02:00 -04:00
ianmarshall 8613e76659 Documentation for terminology. 2020-10-04 21:20:19 -04:00
IanMMarshall f1710fd0be
Merge pull request #2081 from jamesagnew/feature_2020_09_02_term_multi_version_support 
Feature 2020 09 02 term multi version support
 2020-10-01 12:24:40 -04:00
ianmarshall 7899837fe0 Replaced references to SystemIdentifier with SystemUrlAndVersion. 2020-09-30 22:04:08 -04:00
ianmarshall 90f1981817 Updated tests for missed dstu2 code coverage. 2020-09-30 18:10:57 -04:00
Tadgh 8760fcba87
Merge pull request #2109 from jamesagnew/gg_20200930-accessor-name 
Rename accessors, fix whitespace
 2020-09-30 14:37:47 -04:00
Tadgh 66a0115340 Missed a space 2020-09-30 11:13:40 -04:00
Tadgh ca52268249 Rename accessors, fix whitespace 2020-09-30 11:11:56 -04:00
jamesagnew 6fc1c5c85b Add license headers 2020-09-30 05:42:09 -04:00
ianmarshall dc3443665c Changes per code review. 2020-09-29 21:12:27 -04:00
ianmarshall 8e7b4e8437 Changes per code review. 2020-09-29 21:05:28 -04:00
Ken Stevens d71121e268 oops 2020-09-29 17:37:09 -04:00
Ken Stevens 09d09233ff
empi bugfixes and enhancements (#2104) 2020-09-29 17:27:43 -04:00
IanMMarshall c593958d2c
Apply suggestions from code review 
Co-authored-by: Diederik Muylwyk <diederik.muylwyk@gmail.com>
 2020-09-29 15:16:46 -04:00
IanMMarshall d63c15ef09
Apply suggestions from code review 
Co-authored-by: Diederik Muylwyk <diederik.muylwyk@gmail.com>
 2020-09-29 14:27:57 -04:00