Commit Graph

5092 Commits

Author SHA1 Message Date
Diederik Muylwyk e5c8ffdc20
Merge pull request #1446 from jamesagnew/1445-an-implicit-all-loinc-valueset-needs-to-be-created-when-uploading-the-loinc-codesystem
Resolve "An implicit all-loinc ValueSet needs to be created when uploading the LOINC CodeSystem."
2019-08-26 16:48:07 -04:00
Diederik Muylwyk 0ee15874ca loinc-all ValueSet is now created automatically when loading LOINC terminology. 2019-08-26 16:42:37 -04:00
Diederik Muylwyk a93d4e9bcd
Merge pull request #1444 from jamesagnew/1443-multiaxial-properties-need-to-be-supported-for-code-lookups
Resolve "Multiaxial properties need to be supported for code lookups."
2019-08-26 14:48:59 -04:00
Diederik Muylwyk b01d59d5a0 Added changelog entry. 2019-08-26 14:47:50 -04:00
Diederik Muylwyk 073d2a45a4 Multiaxial hierarchy support is implemented; we not populated parent and child properties. 2019-08-26 14:26:38 -04:00
Diederik Muylwyk 5071c62cb9
Merge pull request #1432 from jamesagnew/1366-expand-operation-needs-to-be-optimized-for-large-valuesets-4
Resolve "1366 expand operation needs to be optimized for large valuesets 4"
2019-08-26 09:55:05 -04:00
Diederik Muylwyk 3f14a7a68b Added changelog entry for switch from Derby to H2 for HAPI FHIR CLI server. 2019-08-26 09:54:05 -04:00
Diederik Muylwyk b41926307c Completed work on large ValueSet expansion support; ready for review. 2019-08-23 17:40:45 -04:00
James Agnew 10958a8e4d I think this might work now.. 2019-08-23 12:22:27 -04:00
Diederik Muylwyk 890555a77d Incremental work on large ValueSet expansion support; transaction boundaries need to be broken up. 2019-08-23 11:46:32 -04:00
Diederik Muylwyk 97a235ddfc Merging master into working branch.
# Conflicts:
#	hapi-fhir-jpaserver-base/src/main/java/ca/uhn/fhir/jpa/dao/DaoConfig.java
2019-08-22 14:02:56 -04:00
Diederik Muylwyk 72dd6b2922 Incremental work on large ValueSet expansion support; fixed broken deletion for TermValueSetConceptDesignation. 2019-08-22 14:00:08 -04:00
Ken Stevens 7d008b2ee0
Merge pull request #1434 from jamesagnew/ks-awaitility-version-bump
awaitility version bump
2019-08-21 15:58:42 -04:00
Ken Stevens 37c1ba44fe Merge remote-tracking branch 'remotes/origin/master' into ks-awaitility-version-bump 2019-08-21 15:04:16 -04:00
James Agnew 9428430822
Add support for Resource.meta.source (#1438)
* Work on indexing source

* Work on tests

* Refactor query count tests

* Unit test fixes

* Add some tests

* DAO fix

* Fix compile error

* Unit test fix

* Cleanup

* Test fix

* Fix compile error

* One more test fix
2019-08-21 11:17:43 -04:00
Diederik Muylwyk 3218bd7853 Incremental work on large ValueSet expansion support; implemented paging when reading concepts from the terminology tables. Switched from Derby to H2. 2019-08-20 18:11:53 -04:00
Ken Stevens 5703b55e88 Merge remote-tracking branch 'remotes/origin/master' into ks-awaitility-version-bump 2019-08-20 15:08:25 -04:00
Ken Stevens df7469731b turn of sql queries 2019-08-20 15:02:02 -04:00
James Agnew ce44115152
Handle cascading deletes correctly with circular references (#1435)
* Handle cascading deletes correctly with circular references

* A bit of cleanup

* Address review comments

* FIx some javadocs

* Fix an incorrect message
2019-08-20 10:08:34 -04:00
Ken Stevens 5016ab1ec2 Merge remote-tracking branch 'remotes/origin/master' into ks-awaitility-version-bump 2019-08-20 09:16:30 -04:00
Ken Stevens daf45db2be fixed a test and removed awaitility excludes
mvn install completed successfully
2019-08-20 09:14:21 -04:00
James Agnew 84836aed84 Fix accidental typo 2019-08-20 08:39:46 -04:00
James Agnew ce879b3863 Fix versioned API incompatibility with GraphQL 2019-08-20 08:35:27 -04:00
Ken Stevens 105d857819 Merge remote-tracking branch 'remotes/origin/master' into ks-awaitility-version-bump 2019-08-19 22:34:58 -04:00
Ken Stevens 97e14711a2 add missing dep 2019-08-19 22:31:52 -04:00
Ken Stevens a43f4ba967 should be test scope only 2019-08-19 22:28:33 -04:00
Diederik Muylwyk 70aef7fbbb Incremental work on large ValueSet expansion support; need pageable results while querying TRM_VALUESET_CONCEPT. 2019-08-19 18:43:43 -04:00
Ken Stevens 630bb916b4 awaitility version bump 2019-08-19 12:15:14 -04:00
Diederik Muylwyk 1bc75d1c3b Merging master into working branch. 2019-08-19 10:43:33 -04:00
Diederik Muylwyk df5eb48c24
Merge pull request #1433 from jamesagnew/dm-fix-deprecated-references-to-versioned-terminologyuploaderprovider-in-jpaserverdemo
Fix deprecated references to versioned TerminologyUploaderProvider.
2019-08-19 10:42:18 -04:00
Diederik Muylwyk b84d6c7061 Fix deprecated references to versioned TerminologyUploaderProvider. 2019-08-19 10:28:05 -04:00
Diederik Muylwyk fa58e73d13 Merging master into working branch. 2019-08-19 09:28:20 -04:00
James Agnew a0cb7beb28 Bump core projects version 2019-08-19 08:15:04 -04:00
Diederik Muylwyk 53364a3af1 Downgraded FIXMEs to TODOs regarding -code for large ValueSets. 2019-08-19 02:50:01 -04:00
Diederik Muylwyk 8590e0ca4d Merging master into working branch.
# Conflicts:
#	hapi-fhir-jpaserver-base/src/main/java/ca/uhn/fhir/jpa/dao/DaoConfig.java
2019-08-19 02:28:30 -04:00
Diederik Muylwyk dfd098c374 Incremental work on large ValueSet expansion support; added use of terminology tables when expanding. 2019-08-19 02:26:12 -04:00
jamesagnew 54657214de FIx issue uploading US Core resources 2019-08-17 18:11:52 -04:00
jamesagnew ab5333f370 Fix subscription config file 2019-08-17 16:15:55 -04:00
jamesagnew 89aa37ea6a Add a test 2019-08-17 15:16:11 -04:00
jamesagnew 34c1879973 Add changelog 2019-08-17 14:31:30 -04:00
jamesagnew 81adc5c99e Merge master 2019-08-17 14:31:30 -04:00
Ken Stevens 970c421311 allow urls in batch transactions to start with / 2019-08-17 14:31:30 -04:00
jamesagnew f252cda126 Test fixes 2019-08-17 14:15:28 -04:00
James Agnew 57c6064d89 Another test fix 2019-08-17 12:21:08 -04:00
James Agnew 74c83f6148 Test fixes 2019-08-17 12:01:04 -04:00
James Agnew 9e8af58e81 Fix reference params via filter 2019-08-16 14:56:36 -04:00
James Agnew afb682dfe9 Handle AuthorizationInterceptor rejection of by-type reads on the wrong type earlier in the process 2019-08-15 09:16:45 -04:00
James Agnew 1e07fcd2b3
Fix an unintended regression in #1357 (#1429)
* Start working on a tweak to #1357 - Not yet complete

* Tweaks to avoid an unintended regression from #1357
2019-08-15 08:35:50 -04:00
Ken Stevens f29c37a654 added IBaseReference constructor to TokenParam 2019-08-14 15:33:50 -04:00
jamesagnew 2d35db877e Add version constant 2019-08-14 15:03:05 -04:00