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5499 Commits

Author SHA1 Message Date
Ken Stevens f8e15ea69e added final String release field to migration BaseTask 2019-10-28 16:09:18 -04:00
Ken Stevens 1aabe9bf40 added final String version field to migration BaseTask 2019-10-28 15:34:21 -04:00
Ken Stevens 55c10c2292 Merge remote-tracking branch 'remotes/origin/master' into ks-flyway 2019-10-28 11:28:41 -04:00
James Agnew a82da8de1c Override enum factory interfaces 2019-10-27 17:51:57 -04:00
Ken Stevens 18e8604494 Merge remote-tracking branch 'remotes/origin/master' into ks-flyway 
# Conflicts:
#	hapi-fhir-cli/hapi-fhir-cli-api/pom.xml
 2019-10-27 08:29:52 -04:00
jamesagnew ffb15682de Update license headers 2019-10-26 14:48:08 -04:00
James Agnew 2b3c775b77 Some cleanup and fix a test 2019-10-26 12:45:57 -04:00
jamesagnew 5a300d2d8e Merge branch 'master' of github.com:jamesagnew/hapi-fhir 2019-10-26 10:32:16 -04:00
James Agnew c83b330c48 Merge branch 'master' of github.com:jamesagnew/hapi-fhir 2019-10-25 17:05:30 -04:00
James Agnew d7604229bc Merge branch 'bdenton-osgi-server-work' 2019-10-25 17:05:20 -04:00
James Agnew 9cc945b5bd Merge branch 'osgi-server-work' of https://github.com/bdenton/hapi-fhir into bdenton-osgi-server-work 2019-10-25 17:05:09 -04:00
James Agnew 403a3d1889
Correct URI loading in testpage-overlay (#1565) 
* Clean up tests

* Try to fix intermittent

* Fix URI issue

* Add changelog
 2019-10-25 16:14:06 -04:00
jamesagnew 935ec9ebc2 License headers 2019-10-25 05:44:51 -04:00
Ken Stevens bf3af43f32
Merge pull request #1563 from jamesagnew/ks-inmemory-source 
in-memory _source search
 2019-10-24 21:34:29 -04:00
Ken Stevens f19100cbb3 final cleanup 2019-10-24 20:29:45 -04:00
Ken Stevens 4a2ed62357 review feedback 2019-10-24 20:25:16 -04:00
Ken Stevens 08472c1e3f ready to merge 2019-10-24 17:56:15 -04:00
Ken Stevens 5379ab8c2c implement in-memory match 2019-10-24 17:53:02 -04:00
Ken Stevens b7aa327118 pre-review cleanup 2019-10-24 16:47:43 -04:00
Ken Stevens 4fa849a3e5 pre-review cleanup 2019-10-24 16:43:47 -04:00
Ken Stevens 43f17534bb commiting with FIXMEs so James can review 2019-10-24 16:40:53 -04:00
James Agnew df4376606d
Validation cleanup (#1561) 
* Validation cleanup

* Test fix

* Fix build

* Test tweaks
 2019-10-24 13:09:18 -05:00
John Poth 969174136e Rename org.hl7.fhir.convertors package as it's already used 2019-10-24 12:23:38 -05:00
James Agnew 74c03b5bb7 Add a test 2019-10-24 08:32:52 -04:00
James Agnew 91ec0a6922 Test fix 2019-10-24 08:32:52 -04:00
James Agnew 385a885abf Add ability for resource source to be specified by header 2019-10-24 08:32:52 -04:00
James Agnew 0d3f7d4a03 Correctly handle searching by source in JPA server 2019-10-23 06:58:16 -04:00
Ken Stevens be3ce538ed
Merge pull request #1557 from jamesagnew/ks-better-inmemory-error 
Improved in-memory error messages
 2019-10-23 00:05:58 -04:00
Anthony Sute 306b02e147 Additional tracing statements. 2019-10-22 20:41:52 -04:00
James Agnew 19247ffb46
Allow updating externalized binary (#1556) 
* Add non working test

* Add a test

* FIx test

* Allow updating existing externalized binary data

* Add test

* Remove unneeded test

* Fix test
 2019-10-22 18:10:03 -04:00
James Agnew 9e44049847 Allow for improved overriding of RestfulServer#newRequestDetails 2019-10-22 18:09:21 -04:00
James Agnew 371bf2e5cf Disable unit test SQL logging 2019-10-22 17:27:36 -04:00
James Agnew 9b94e4e26d
Allow uploading term deltas using CS resource (#1555) 
* Work on accepting codesystem reources for delta operations

* Ongoing work on term uploader

* Restore the ability to use CodeSystem resources for the delta

* Add tests

* Fix NPE

* Test fixes
 2019-10-22 17:11:39 -04:00
James Agnew 464c6c5b45
Upgrade dependencies and addess Semmle issues (#1554) 
* Version bumps

* FIx build issues

* Address a few Semmle issues

* Work on tests

* Some test fixes

* Test fix

* Fix deletions

* Test fix

* Fix intermittent test failure

* One more dependency bump

* Add some test logging

* Remove bad import

* Add some tests

* Test updates
 2019-10-22 17:10:58 -04:00
Ken Stevens dbcff8d1fa Merge remote-tracking branch 'remotes/origin/master' into ks-better-inmemory-error 2019-10-22 17:10:06 -04:00
James Agnew a375f761cb FIx typo in pom 2019-10-22 14:17:25 -04:00
James Agnew 5809457335 Credit for #1526 2019-10-22 14:01:21 -04:00
jelmer.terwal c003047ca9 Split test from example 2019-10-22 13:58:52 -04:00
jelmer.terwal a859b210e3 Previously the server would not start when using a CodeableConcept in a List in combination with Kotlin 2019-10-22 13:58:52 -04:00
jelmer.terwal c337fdde14 Override breakes stuff here for Kotlin 2019-10-22 13:58:52 -04:00
jelmer.terwal 61adf61fc0 Remove no longer needed stuff 2019-10-22 13:58:52 -04:00
jelmer.terwal 5002a087bb Some work on jamesagnew/hapi-fhir/#1297 2019-10-22 13:58:52 -04:00
Ken Stevens 3115447748 Merge remote-tracking branch 'remotes/origin/master' into ks-better-inmemory-error 2019-10-22 10:46:31 -04:00
Ken Stevens d0704269d7 ready for rereview 2019-10-22 10:13:49 -04:00
Ken Stevens 427f7397da ready for rereview 2019-10-22 10:13:49 -04:00
Ken Stevens 0f40b2c48f npe check for binary storage interceptor 2019-10-22 10:13:49 -04:00
Ken Stevens 2e7876b682 Merge remote-tracking branch 'remotes/origin/ks-binary-storage-NP-check' into ks-better-inmemory-error 2019-10-22 09:33:47 -04:00
Ken Stevens ef35c4e7be ready for rereview 2019-10-22 09:32:10 -04:00
Ken Stevens 2e532e4e98 ready for rereview 2019-10-22 09:29:18 -04:00
Ken Stevens d85e73c6fd Merge remote-tracking branch 'remotes/origin/master' into ks-binary-storage-NP-check 2019-10-22 08:58:51 -04:00