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8988 Commits

Author SHA1 Message Date
juan.marchionatto 8a1d95f348 Add service to get CodeSystem from its forcedId without forcing rollback by ResourceNotFoundException in case not found 2021-09-20 17:14:42 -04:00
Johnson Lu f1f9c672ad
3110 zh disallow unknown extensions (#3009) 
* Added allowKnownExtensionsOnly() method such which calls setAnyExtensionsAllowed() to set myAnyExtensionsAllowed to false and modified changelogs to add entry for this ticket.

* Modified docs to remove description for .allowAnyExtensions() and included it within a description for .allowKnownExtensionsOnly() and also added test for .allowKnownExtensionsOnly()

* refactored allowKnownExtensionsOnly() to rejectUnknownExtensions()
 2021-09-20 15:40:56 -04:00
juan.marchionatto cf704124f2 Merge branch 'issue-2851-upload-terminology-valueset-parallel-versioning' of github.com:hapifhir/hapi-fhir into issue-2851-upload-terminology-valueset-parallel-versioning 2021-09-20 11:20:19 -04:00
juan.marchionatto 1492b9220a Add test comment 2021-09-20 11:15:53 -04:00
juan.marchionatto d706caf949 merge master in 2021-09-20 11:08:17 -04:00
jmarchionatto 804309eaaf
Merge branch 'master' into issue-2851-upload-terminology-valueset-parallel-versioning 2021-09-20 09:25:06 -04:00
juan.marchionatto d372371f36 Make sure a loinc CodeSystem always has a ForcedId 2021-09-20 08:51:51 -04:00
JasonRoberts-smile 0eb6958701
Merge pull request #3004 from hapifhir/jr-20210914-oidc-support-in-swagger 
add support for OIDC authentication to Swagger API
 2021-09-17 18:27:53 -04:00
JasonRoberts-smile 624ad3fcab
Merge branch 'master' into jr-20210914-oidc-support-in-swagger 2021-09-17 17:09:19 -04:00
Tadgh e3d1fbf83f
Merge pull request #2850 from hapifhir/2849_add_new_mdm_param 
Added new parameter to MDM processing
 2021-09-17 14:36:42 -04:00
Jason Roberts 4051fe0849 code review feedback 2021-09-17 14:17:33 -04:00
Tadgh 3b1bf7aa09
Merge branch 'master' into 2849_add_new_mdm_param 2021-09-17 13:27:09 -04:00
jmarchionatto e7cc0335d8
Merge pull request #3001 from hapifhir/issue-2995-valuesetcomposeincludeversion-is-not-set-when-uploading-terminology 
Issue 2995 valueset.compose.include.version is not set when uploading terminology
 2021-09-17 12:40:26 -04:00
Jaison B 8bb9aca8df Merge branch 'master' into 2849_add_new_mdm_param 2021-09-17 10:18:24 -06:00
Jason Roberts cb374042f5 Merge branch 'jr-20210914-oidc-support-in-swagger' of github.com:hapifhir/hapi-fhir into jr-20210914-oidc-support-in-swagger 2021-09-17 11:42:34 -04:00
Jason Roberts a866feb730 changelog 2021-09-17 11:41:51 -04:00
jmarchionatto 115056800c
Merge branch 'master' into issue-2995-valuesetcomposeincludeversion-is-not-set-when-uploading-terminology 2021-09-17 11:32:18 -04:00
JasonRoberts-smile 3beb84ac2e
Merge branch 'master' into jr-20210914-oidc-support-in-swagger 2021-09-17 10:55:06 -04:00
Jason Roberts 56920149bc add support for OIDC authentication to Swagger API 2021-09-17 09:48:39 -04:00
Tadgh 75bb6e3f7a
Merge pull request #3002 from Daron-Cerner/add-scope-to-test-dependency 
Add scope to unit test dependency
 2021-09-16 16:18:25 -04:00
juan.marchionatto 18e3ed68eb Revert loinc.xml deletion until current work gets completed 2021-09-16 15:14:43 -04:00
Daron McIntosh 528690fe6c add commons-lang dep to hapi-fhir-validation pom 2021-09-16 18:26:53 +00:00
juan.marchionatto fbd23498fc Adjust test data and fix all test cases implemented so far 2021-09-16 13:41:05 -04:00
Daron McIntosh 756af63993 Add scope to unit test dependency 2021-09-16 17:33:04 +00:00
juan.marchionatto c9162cba6d Merge in fix for ISSUE-2995 2021-09-16 13:20:00 -04:00
juan.marchionatto 0dfc716a82 Adjust code validation to properly obtain CodeSystem's current version 2021-09-16 13:18:49 -04:00
James Agnew a56c85f780
Eliminate Search Coordinator ThreadPool (#2991) 
* Add test

* Remove search coordinator thread pool

* Add changelog

* Add docs

* Test fixes

* Test fixes

* Test fixes

* Test fix
 2021-09-16 16:37:34 +00:00
juan.marchionatto 3d3bab5102 merge master into branch 2021-09-16 11:02:17 -04:00
Tadgh 5bbe69cd31 Move into data class 2021-09-15 21:17:03 -04:00
juan.marchionatto 2435d77089 Add changelog 2021-09-15 14:46:33 -04:00
juan.marchionatto 16e329e40c Add version to ValueSet.compose.include when uploading terminology 2021-09-15 14:40:21 -04:00
Tadgh b682819f25
Merge pull request #2987 from hapifhir/conditional-bug 
Validate Conditional Urls are matched by stored resource before completing transaction.
 2021-09-15 12:29:55 -04:00
Tadgh 724e4b37da Fix up test to actually match 2021-09-15 11:24:01 -04:00
juan.marchionatto 7900230431 Add version to ValueSet.compose.include when uploading terminology 2021-09-15 10:29:30 -04:00
Tadgh 171f0f8724 fix rulebuilder 2021-09-15 09:04:45 -04:00
Tadgh a0c8cc4279 fix test 2021-09-15 01:23:43 -04:00
Tadgh 9070aa3571 wip 2021-09-15 01:20:46 -04:00
Tadgh 8f0e8b9e51 remove useless DB calls 2021-09-14 18:44:55 -04:00
Tadgh 9bb1558b71 Update query count ttest 2021-09-14 17:45:09 -04:00
Tadgh bb5e04e706 Fix broken test 2021-09-14 17:22:25 -04:00
Tadgh b25bdc1169 Remove crazy double encoding 2021-09-14 13:48:37 -04:00
Tadgh 9771210553 Prefer non-lazy outcomes in map 2021-09-14 13:40:53 -04:00
Tadgh 49debec36a Fix problem with null conditionals 2021-09-14 10:48:56 -04:00
juan.marchionatto bd456dfff2 Enhance test by adding operations use cases. Improve test data with more version differentiators. 2021-09-14 10:00:15 -04:00
juan.marchionatto 8288d12e97 Obtain current CodeSystem from null-pointed ForcedId, as done for ValueSet 2021-09-14 09:58:32 -04:00
Tadgh 9d982c5e08
Merge branch 'master' into conditional-bug 2021-09-14 08:51:58 -04:00
Tadgh 0a9d5344e3 remove more NPE, fix old test 2021-09-14 02:10:34 -04:00
Tadgh fb8def21ae remove potential NPE 2021-09-14 02:08:42 -04:00
Tadgh 75a16f3b13 Add docs and changelog 2021-09-14 01:54:59 -04:00
Tadgh 3d24a4ce16 Refactor to support arbitrary additional SPs based on Type for a compartment 2021-09-14 01:02:19 -04:00