mirror of
https://github.com/hapifhir/hapi-fhir.git
synced 2025-02-10 06:55:07 +00:00
8c48a6fb91
* Add new Clinical Reasoning module * Add config to get test up and running * Removed FhirClient from tests * First passing test * Remove unused utilities * Build updates * exclude xxp3 and substitute with unbundled version * Refactor to use provider factory and loader pattern * First passing dstu3 test * CR r4 test config and immunization tests * Add base test classes * Exclude transitive dependency xmlpull * More dependency cleanup * Refactor to remove JPA dependencies, rename module to hapi-fhir-storage-cr * Fixes for duplicate xpp3 classes * Remove more references to jpa * Add mock FHIR server for terminology endpoint tests * fix cql file for making providerr4 tests pass * fix pom * fix generic * Adding r4 test cases for measure operations. * Fix endpoint tests * javadoc comment, temporarily comment out test results for practitioner sync * javadoc typo fix * adding java docs for cr module WIP * Updates to clinical reasoning documentation * More documentation updates * docs now compile * fix test * DqmR4IT now successfully starts up, but the test does not pass * Fix additionalData test * Make measure service bean overridable * adding clinical reasoning javadoc information * Rename interfaces to start with I * More styleguide updates * Reformat all code in the storage-cr module * More coding convention updates * Remove bunches of unused code, reogranize so that fhir version in package name is consistent * Clean up some static array initializations * add practitioner patient list * refactor product-line constant * test dependency update * add change log for cr module * Add hapi-validation to the pom * Exclude dependencies that are causing duplicates * More dependencies and exclusions * Make some base MeasureService components protected * Update to latest cql compiler release * fix measure service for null subject & practitioner and open up practitioner test * Rev to release versions * Add remaining Dstu3 tests * update hedis bundle from policyHolder to beneficiary * update snapshot * Delete old CQL module * Post-master-merge recovery * Fix Java 17 feature usage issue * update changelog with more information about new functionality * Remove support chain wrapper usage * Add javadocs to IResourceLoader * added the property versioning for antlr jar. * addressing code review comments. * addressing code review comments. * Fix typos in changelog * Remove azure pipeline for cql module, add it for cr module * Address exception comments, add Msg.code calls to exceptions * Fix self-assignment bug * Add storage-cr module to bom * addressing coding comments. * Addressed the variable naming convention to camelCase. * Snapshot version bump Co-authored-by: Brenin Rhodes <brenin@alphora.com> Co-authored-by: Jonathan Percival <jonathan.i.percival@gmail.com> Co-authored-by: justin.mckelvy <justin.mckelvy@smilecdr.com> Co-authored-by: Ken Stevens <ken@smilecdr.com> Co-authored-by: Chalma Maadaadi <chalma@alphora.com> Co-authored-by: mdnazmulkarim <nazmul.karim@smilecdr.com> Co-authored-by: Tadgh <garygrantgraham@gmail.com>
400 lines
11 KiB
XML
400 lines
11 KiB
XML
<project xmlns="http://maven.apache.org/POM/4.0.0" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
|
|
xsi:schemaLocation="http://maven.apache.org/POM/4.0.0 http://maven.apache.org/xsd/maven-4.0.0.xsd">
|
|
<modelVersion>4.0.0</modelVersion>
|
|
|
|
<parent>
|
|
<groupId>ca.uhn.hapi.fhir</groupId>
|
|
<artifactId>hapi-deployable-pom</artifactId>
|
|
<version>6.3.7-SNAPSHOT</version>
|
|
<relativePath>../hapi-deployable-pom/pom.xml</relativePath>
|
|
</parent>
|
|
|
|
<artifactId>hapi-fhir-structures-r5</artifactId>
|
|
<packaging>bundle</packaging>
|
|
|
|
<name>HAPI FHIR Structures - FHIR R5</name>
|
|
|
|
<dependencies>
|
|
<dependency>
|
|
<groupId>ca.uhn.hapi.fhir</groupId>
|
|
<artifactId>hapi-fhir-base</artifactId>
|
|
<version>${project.version}</version>
|
|
</dependency>
|
|
<dependency>
|
|
<groupId>ca.uhn.hapi.fhir</groupId>
|
|
<artifactId>org.hl7.fhir.utilities</artifactId>
|
|
<version>${fhir_core_version}</version>
|
|
</dependency>
|
|
<dependency>
|
|
<groupId>ca.uhn.hapi.fhir</groupId>
|
|
<artifactId>org.hl7.fhir.r5</artifactId>
|
|
<version>${fhir_core_version}</version>
|
|
</dependency>
|
|
<dependency>
|
|
<groupId>ca.uhn.hapi.fhir</groupId>
|
|
<artifactId>hapi-fhir-caching-api</artifactId>
|
|
<version>${project.version}</version>
|
|
</dependency>
|
|
<dependency>
|
|
<groupId>org.fhir</groupId>
|
|
<artifactId>ucum</artifactId>
|
|
<optional>true</optional>
|
|
<exclusions>
|
|
<exclusion>
|
|
<groupId>junit</groupId>
|
|
<artifactId>junit</artifactId>
|
|
</exclusion>
|
|
</exclusions>
|
|
</dependency>
|
|
|
|
<!--
|
|
Optional dependencies from RI codebase
|
|
-->
|
|
<dependency>
|
|
<groupId>com.fasterxml.woodstox</groupId>
|
|
<artifactId>woodstox-core</artifactId>
|
|
<scope>test</scope>
|
|
</dependency>
|
|
<dependency>
|
|
<groupId>es.nitaur.markdown</groupId>
|
|
<artifactId>txtmark</artifactId>
|
|
<optional>true</optional>
|
|
</dependency>
|
|
<dependency>
|
|
<groupId>org.antlr</groupId>
|
|
<artifactId>ST4</artifactId>
|
|
<optional>true</optional>
|
|
</dependency>
|
|
<dependency>
|
|
<groupId>xpp3</groupId>
|
|
<artifactId>xpp3</artifactId>
|
|
<optional>true</optional>
|
|
</dependency>
|
|
<dependency>
|
|
<groupId>com.google.guava</groupId>
|
|
<artifactId>guava</artifactId>
|
|
<optional>true</optional>
|
|
</dependency>
|
|
|
|
<!--
|
|
Test dependencies on other optional parts of HAPI
|
|
-->
|
|
<dependency>
|
|
<groupId>ca.uhn.hapi.fhir</groupId>
|
|
<artifactId>hapi-fhir-validation-resources-r5</artifactId>
|
|
<version>${project.version}</version>
|
|
<scope>test</scope>
|
|
</dependency>
|
|
<dependency>
|
|
<groupId>ca.uhn.hapi.fhir</groupId>
|
|
<artifactId>hapi-fhir-client</artifactId>
|
|
<version>${project.version}</version>
|
|
<optional>true</optional>
|
|
</dependency>
|
|
<dependency>
|
|
<groupId>ca.uhn.hapi.fhir</groupId>
|
|
<artifactId>hapi-fhir-server</artifactId>
|
|
<version>${project.version}</version>
|
|
<optional>true</optional>
|
|
</dependency>
|
|
<dependency>
|
|
<groupId>javax.servlet</groupId>
|
|
<artifactId>javax.servlet-api</artifactId>
|
|
<optional>true</optional>
|
|
</dependency>
|
|
|
|
<!--
|
|
Optional dependencies used by org.hl7.fhir.r5
|
|
We include these here to get the aggregate JavaDoc to work
|
|
-->
|
|
|
|
<dependency>
|
|
<groupId>com.squareup.okhttp3</groupId>
|
|
<artifactId>okhttp</artifactId>
|
|
<optional>true</optional>
|
|
</dependency>
|
|
<dependency>
|
|
<groupId>org.projectlombok</groupId>
|
|
<artifactId>lombok</artifactId>
|
|
<version>1.18.22</version>
|
|
<optional>true</optional>
|
|
</dependency>
|
|
<dependency>
|
|
<groupId>org.apache.poi</groupId>
|
|
<artifactId>ooxml-schemas</artifactId>
|
|
<optional>true</optional>
|
|
</dependency>
|
|
<dependency>
|
|
<groupId>org.apache.poi</groupId>
|
|
<artifactId>poi</artifactId>
|
|
<optional>true</optional>
|
|
</dependency>
|
|
<dependency>
|
|
<groupId>org.apache.poi</groupId>
|
|
<artifactId>poi-ooxml</artifactId>
|
|
<optional>true</optional>
|
|
</dependency>
|
|
<dependency>
|
|
<groupId>org.apache.poi</groupId>
|
|
<artifactId>poi-ooxml-schemas</artifactId>
|
|
<optional>true</optional>
|
|
</dependency>
|
|
|
|
<dependency>
|
|
<groupId>com.google.code.gson</groupId>
|
|
<artifactId>gson</artifactId>
|
|
<optional>true</optional>
|
|
</dependency>
|
|
<dependency>
|
|
<groupId>org.jetbrains</groupId>
|
|
<artifactId>annotations</artifactId>
|
|
<optional>true</optional>
|
|
</dependency>
|
|
|
|
<!-- Testing -->
|
|
<dependency>
|
|
<groupId>ca.uhn.hapi.fhir</groupId>
|
|
<artifactId>hapi-fhir-caching-testing</artifactId>
|
|
<version>${project.version}</version>
|
|
<scope>test</scope>
|
|
</dependency>
|
|
<dependency>
|
|
<groupId>org.xmlunit</groupId>
|
|
<artifactId>xmlunit-core</artifactId>
|
|
<scope>test</scope>
|
|
</dependency>
|
|
<dependency>
|
|
<groupId>org.eclipse.jetty</groupId>
|
|
<artifactId>jetty-servlets</artifactId>
|
|
<scope>test</scope>
|
|
</dependency>
|
|
<dependency>
|
|
<groupId>org.eclipse.jetty</groupId>
|
|
<artifactId>jetty-servlet</artifactId>
|
|
<scope>test</scope>
|
|
</dependency>
|
|
<dependency>
|
|
<groupId>org.eclipse.jetty</groupId>
|
|
<artifactId>jetty-server</artifactId>
|
|
<scope>test</scope>
|
|
</dependency>
|
|
<dependency>
|
|
<groupId>org.eclipse.jetty</groupId>
|
|
<artifactId>jetty-util</artifactId>
|
|
<scope>test</scope>
|
|
</dependency>
|
|
<dependency>
|
|
<groupId>org.eclipse.jetty</groupId>
|
|
<artifactId>jetty-webapp</artifactId>
|
|
<scope>test</scope>
|
|
</dependency>
|
|
<dependency>
|
|
<groupId>org.eclipse.jetty</groupId>
|
|
<artifactId>jetty-http</artifactId>
|
|
<scope>test</scope>
|
|
</dependency>
|
|
<dependency>
|
|
<groupId>ch.qos.logback</groupId>
|
|
<artifactId>logback-classic</artifactId>
|
|
<optional>true</optional>
|
|
<scope>test</scope>
|
|
</dependency>
|
|
<dependency>
|
|
<groupId>org.thymeleaf</groupId>
|
|
<artifactId>thymeleaf</artifactId>
|
|
<scope>test</scope>
|
|
</dependency>
|
|
<dependency>
|
|
<groupId>ca.uhn.hapi.fhir</groupId>
|
|
<artifactId>hapi-fhir-test-utilities</artifactId>
|
|
<version>${project.version}</version>
|
|
<scope>test</scope>
|
|
</dependency>
|
|
|
|
<!-- Dependencies for Schematron -->
|
|
<dependency>
|
|
<groupId>com.helger</groupId>
|
|
<artifactId>ph-schematron</artifactId>
|
|
<scope>test</scope>
|
|
</dependency>
|
|
<dependency>
|
|
<groupId>com.helger</groupId>
|
|
<artifactId>ph-commons</artifactId>
|
|
<scope>test</scope>
|
|
</dependency>
|
|
<dependency>
|
|
<groupId>javax.activation</groupId>
|
|
<artifactId>javax.activation-api</artifactId>
|
|
<scope>test</scope>
|
|
</dependency>
|
|
<dependency>
|
|
<groupId>javax.xml.bind</groupId>
|
|
<artifactId>jaxb-api</artifactId>
|
|
<scope>test</scope>
|
|
</dependency>
|
|
<dependency>
|
|
<groupId>org.glassfish.jaxb</groupId>
|
|
<artifactId>jaxb-runtime</artifactId>
|
|
<scope>test</scope>
|
|
</dependency>
|
|
|
|
<!-- UNIT TEST DEPENDENCIES -->
|
|
<dependency>
|
|
<groupId>net.sf.json-lib</groupId>
|
|
<artifactId>json-lib</artifactId>
|
|
<classifier>jdk15</classifier>
|
|
<scope>test</scope>
|
|
<exclusions>
|
|
<exclusion>
|
|
<artifactId>commons-logging</artifactId>
|
|
<groupId>commons-logging</groupId>
|
|
</exclusion>
|
|
<exclusion>
|
|
<artifactId>commons-lang</artifactId>
|
|
<groupId>commons-lang</groupId>
|
|
</exclusion>
|
|
</exclusions>
|
|
</dependency>
|
|
<dependency>
|
|
<groupId>net.sf.json-lib</groupId>
|
|
<artifactId>json-lib</artifactId>
|
|
<classifier>jdk15-sources</classifier>
|
|
<scope>test</scope>
|
|
<exclusions>
|
|
<exclusion>
|
|
<artifactId>commons-logging</artifactId>
|
|
<groupId>commons-logging</groupId>
|
|
</exclusion>
|
|
</exclusions>
|
|
</dependency>
|
|
<dependency>
|
|
<groupId>directory-naming</groupId>
|
|
<artifactId>naming-java</artifactId>
|
|
<scope>test</scope>
|
|
<exclusions>
|
|
<exclusion>
|
|
<artifactId>commons-logging</artifactId>
|
|
<groupId>commons-logging</groupId>
|
|
</exclusion>
|
|
</exclusions>
|
|
</dependency>
|
|
|
|
<dependency>
|
|
<groupId>org.springframework</groupId>
|
|
<artifactId>spring-context</artifactId>
|
|
<scope>test</scope>
|
|
</dependency>
|
|
<dependency>
|
|
<groupId>org.springframework</groupId>
|
|
<artifactId>spring-web</artifactId>
|
|
<scope>test</scope>
|
|
</dependency>
|
|
<dependency>
|
|
<groupId>com.google.code.findbugs</groupId>
|
|
<artifactId>jsr305</artifactId>
|
|
</dependency>
|
|
</dependencies>
|
|
|
|
<reporting>
|
|
<plugins>
|
|
<plugin>
|
|
<groupId>org.apache.maven.plugins</groupId>
|
|
<artifactId>maven-javadoc-plugin</artifactId>
|
|
<configuration>
|
|
<show>public</show>
|
|
<includeDependencySources>true</includeDependencySources>
|
|
<dependencySourceIncludes>
|
|
<include>ca.uhn.hapi.fhir:org.hl7.fhir.r5</include>
|
|
</dependencySourceIncludes>
|
|
<additionalDependencies>
|
|
<dependency>
|
|
<groupId>com.squareup.okhttp3</groupId>
|
|
<artifactId>okhttp</artifactId>
|
|
<version>${okhttp_version}</version>
|
|
</dependency>
|
|
</additionalDependencies>
|
|
</configuration>
|
|
</plugin>
|
|
</plugins>
|
|
</reporting>
|
|
|
|
<build>
|
|
<plugins>
|
|
<plugin>
|
|
<groupId>org.apache.maven.plugins</groupId>
|
|
<artifactId>maven-surefire-plugin</artifactId>
|
|
<configuration>
|
|
<argLine>@{argLine} ${surefire_jvm_args}</argLine>
|
|
</configuration>
|
|
</plugin>
|
|
<plugin>
|
|
<groupId>org.codehaus.mojo</groupId>
|
|
<artifactId>license-maven-plugin</artifactId>
|
|
<configuration>
|
|
<!-- Don't add UHN licenses to RI structures -->
|
|
<skipUpdateLicense>true</skipUpdateLicense>
|
|
</configuration>
|
|
</plugin>
|
|
<plugin>
|
|
<groupId>org.apache.maven.plugins</groupId>
|
|
<artifactId>maven-compiler-plugin</artifactId>
|
|
<configuration>
|
|
<fork>true</fork>
|
|
</configuration>
|
|
</plugin>
|
|
<plugin>
|
|
<groupId>org.apache.felix</groupId>
|
|
<artifactId>maven-bundle-plugin</artifactId>
|
|
<extensions>true</extensions>
|
|
<configuration>
|
|
<instructions>
|
|
<_nouses>true</_nouses>
|
|
<_removeheaders>Built-By, Include-Resource, Private-Package, Require-Capability</_removeheaders>
|
|
<!-- No need to disable normal OSGi class loading
|
|
<Fragment-Host>
|
|
ca.uhn.hapi.fhir.hapi-fhir-base
|
|
</Fragment-Host>
|
|
-->
|
|
</instructions>
|
|
</configuration>
|
|
</plugin>
|
|
<plugin>
|
|
<groupId>org.apache.maven.plugins</groupId>
|
|
<artifactId>maven-javadoc-plugin</artifactId>
|
|
<configuration>
|
|
<includeDependencySources>true</includeDependencySources>
|
|
<dependencySourceIncludes>
|
|
<include>ca.uhn.hapi.fhir:org.hl7.fhir.r5</include>
|
|
</dependencySourceIncludes>
|
|
<additionalDependencies>
|
|
<dependency>
|
|
<groupId>com.google.guava</groupId>
|
|
<artifactId>guava</artifactId>
|
|
<version>${guava_version}</version>
|
|
</dependency>
|
|
<dependency>
|
|
<groupId>com.squareup.okhttp3</groupId>
|
|
<artifactId>okhttp</artifactId>
|
|
<version>${okhttp_version}</version>
|
|
</dependency>
|
|
</additionalDependencies>
|
|
</configuration>
|
|
</plugin>
|
|
</plugins>
|
|
</build>
|
|
|
|
<profiles>
|
|
<profile>
|
|
<id>CI</id>
|
|
<build>
|
|
<plugins>
|
|
<plugin>
|
|
<groupId>org.codehaus.mojo</groupId>
|
|
<artifactId>animal-sniffer-maven-plugin</artifactId>
|
|
</plugin>
|
|
</plugins>
|
|
</build>
|
|
</profile>
|
|
</profiles>
|
|
</project>
|