2431 Commits

Author SHA1 Message Date
Grahame Grieve
0c4da028b3 fix slicing by type and profile to allow multiple options per slice 2024-11-07 22:14:49 +10:30
dotasek
afd9e7a471 Merge remote-tracking branch 'origin/master' into do-20241021-tx-auth 2024-11-06 19:19:53 -05:00
dotasek
b6ef81c9f3 Switch to static fhirBuilder for all FhirRequestBuilders
+ Fix null user agent issue
+ Load ManagedWebAccess from FHIR settings
+ Add terminology servers to FhirSettings
2024-11-06 09:47:27 -05:00
dotasek
e45c0b2bf0 Merge remote-tracking branch 'origin/master' into do-20241021-tx-auth 2024-11-05 10:51:21 -05:00
dotasek
ac7c7332d3 Use ManagedFhirWebAccess for DSTU2 2024-11-04 17:49:31 -05:00
Grahame Grieve
ada49aee5b More json parsing improvements 2024-11-04 20:25:30 +10:30
Grahame Grieve
c6e5521f4a Merge remote-tracking branch 'origin/master' 2024-11-04 17:45:58 +10:30
Grahame Grieve
c06051838f
Merge pull request #1763 from alfy91/dev-fix_json_validation
fix parenthesis matching for JSON validation.
2024-11-04 17:45:46 +10:30
Grahame Grieve
8bf76f151d validate min-length when found in extension 2024-11-02 19:19:32 +10:30
dotasek
bdc02a5622 Merge remote-tracking branch 'origin/master' into do-20241021-tx-auth 2024-11-01 09:16:36 -04:00
Grahame Grieve
4db933235a PECodeGenerator fixes 2024-11-01 23:11:45 +10:30
dotasek
c5aaf43121 Make sure we get response headers 2024-10-30 19:08:38 -04:00
Grahame Grieve
8ceb1024c0 Update output from tx-tester to include release ready statement 2024-10-30 21:07:32 +10:30
dotasek
fe58a8a2c5 Actually add headers from HTTPRequest to OkHttp request 2024-10-29 11:09:47 -04:00
dotasek
f82f8764cf Tidy up code
***NO_CI***
2024-10-25 17:01:09 -04:00
dotasek
03b0c163be Merge branch 'master' into do-20241021-tx-auth 2024-10-25 13:56:06 -04:00
dotasek
0b45b0b882 WIP some HTTP Header refactoring, rename FhirRequest to HTTPRequest 2024-10-25 13:55:33 -04:00
dotasek
b33de12e49 WIP move accept to parameter 2024-10-24 13:57:51 -04:00
markiantorno
54d239a38a Updating version to: 6.4.1-SNAPSHOT and incrementing test cases dependency. 2024-10-24 14:15:50 +00:00
markiantorno
26c445c8fc Release: v6.4.0
## Validator Changes

* Improve warning messages about collections in SQL ViewDefinitions
* Fix type evaluation of .item() in FHIRPath
* Revise message about unknown usage context on additional binding
* Add support for code generation
* Add check for # in CanonicalResource.version
* Fix problem parsing urls in cds-hooks formats
* Fix issues with output folder running tx tests
* Fix bug evaluating resolve() in contained resources when doing slicing

## Other code changes

* Fix NPE processing markdown
* Capture missing snapshot generation messages
* Track OID status
* Improve rendering of coded values
* update tests for changes to PE code generation
* Tx Tests: Add support for special header on specific tests
* Tx Tests: Fix framework to handle diagnostics correctly
* Tx Tests: check http code in tx test cases
* Add support for NCI code rendering
* Adding missing lombok annotation (cannot build without it from scratch) (#1785)
* Remove Encounter Renderer
* Profile code generation fixes
* Add r4 code gen classes
* Draft work for tx server authentication (not landed yet)
* Move XXE safe SAXParserFactory and XMLReader instantiation to XMLUtil
* Bump commons-compress version
***NO_CI***
2024-10-24 13:30:23 +00:00
Grahame Grieve
89be42a649 Merge remote-tracking branch 'origin/master' 2024-10-24 07:16:05 +10:30
dotasek
ddb0a661dd Merge branch '2024-10-gg-tx-server-auth-1' into do-20241021-tx-auth 2024-10-23 11:55:58 -04:00
dotasek
fdbf0da576 WIP move logging, retry, timeout and proxy 2024-10-23 11:55:27 -04:00
Grahame Grieve
77580465c7 revise message about unknown usage context on additional binding 2024-10-23 22:59:32 +10:30
Grahame Grieve
d652aa2f30 Fix NPE processing markdown 2024-10-23 22:19:08 +10:30
dotasek
a94e1bc2af WIP keep moving FhirRequestBuilder to ManagedWebAccess + fix some tests 2024-10-22 17:33:50 -04:00
dotasek
435dbbec9b WIP start moving FhirRequestBuilder to ManagedWebAccess 2024-10-21 17:19:53 -04:00
Grahame Grieve
d6c3a9df0b Add support for NCI code rendering 2024-10-22 05:16:45 +10:30
Grahame Grieve
d613a0cb6c Add check for # in CanonicalResource.version 2024-10-18 21:58:02 +08:00
Grahame Grieve
bed070c736 update note about server type 2024-10-18 21:16:12 +08:00
Grahame Grieve
17afe7c7e6 missed code 2024-10-18 20:51:03 +08:00
Grahame Grieve
cb0759cc00 fix npe in server auth functionality 2024-10-18 20:50:26 +08:00
Grahame Grieve
242bc02372 fix 2024-10-18 16:42:28 +08:00
Grahame Grieve
5117b57305 draft work for tx server authentication 2024-10-18 15:22:09 +08:00
dotasek
f0a25dabe3 Move XXE safe SAXParserFactory and XMLReader instantiation to XMLUtil 2024-10-17 15:46:05 -04:00
dotasek
2d80a09deb Merge remote-tracking branch 'origin/master' into do-20241009-documentbuilderfactory-refactor 2024-10-16 11:59:24 -04:00
markiantorno
cabee9a341 Updating version to: 6.3.33-SNAPSHOT and incrementing test cases dependency. 2024-10-14 06:03:42 +00:00
markiantorno
54bf319161 Release: v6.3.32
## Validator Changes

* Fix validation issue with open-choice questions in R4 questionnaires
* Add command line parameter ```-tx-routing```
* Add command line parameter ```-clear-tx-cache```
* Add command line parameter ```-advisor-file```

## Other code changes

* Render extensions on some data types
* Fix rendering of complex data types when doing profile rendering
***NO_CI***
2024-10-14 05:18:21 +00:00
Grahame Grieve
3b8b2a94c3 Fix validation issue with open-choice questions in R4 questionnaires 2024-10-14 09:02:52 +08:00
markiantorno
a7e216e2c3 Updating version to: 6.3.32-SNAPSHOT and incrementing test cases dependency. 2024-10-10 14:35:11 +00:00
markiantorno
0388bd0835 Release: v6.3.31
## Validator Changes

* Don't send expansion to tx server if there's a compose when sending value sets
* Better handling of error messages from terminology servers
* Stop hitting VSAC server directly

## Other code changes

* Add support for $id$ in terminology tests
* Move new documentbuilderfactory calls to XMLUtils (Security)
***NO_CI***
2024-10-10 13:54:40 +00:00
Grahame Grieve
c7ccbb0110 more work on http client 2024-10-10 19:29:58 +08:00
Grahame Grieve
cacce9b05e fix up processing of server responses 2024-10-09 23:10:09 +08:00
dotasek
7ede053a5f Move new documentbuilderfactory calls to XMLUtils 2024-10-09 09:26:41 -04:00
markiantorno
c030740d9e Updating version to: 6.3.31-SNAPSHOT and incrementing test cases dependency. 2024-10-08 15:52:36 +00:00
markiantorno
ad0af19fb3 Release: v6.3.30
## Validator Changes

* Show message ids in validator (-show-message--ids)
* Fix bug where message id not showing for slicing messages
* Add advisor documentation (not yet functional)
* Fix issue checking package currency for #current packages
* Add warning when code system is marked complete but has no content
* Fix bug processing adding discriminators in derived profiles
* Break valueset concept validation into multiple smaller batches for performance reasons

## Other code changes

* More work on translations in IGs
* Override inheritance of HAPI's old maven-compiler-plugin
* do not use loadPackageFromCacheOnly from outside cache manager
* Fix issues with rendering example scenario
* refactor sql view validation to fix NPE
* Fix misc warnings flagged by builds (#1772) + TRIVY typo
* Bump codeql actions to v3
* Bump checkout action to v4
* Bump commons.io to 2.14.0 (#1771)
* Workaround for ghcr rate limiting of trivy db downloads (#1770)
* Add VSACfinder (template for package analysis)
* Fix github urls
* Spelling fixes
***NO_CI***
2024-10-08 15:04:29 +00:00
dotasek
093fbbc0f3
maven-compiler-plugin maintenance (#1731)
* Override inheritance of HAPI's old maven-compiler-plugin

and stop using deprecated forceJavacCompilerUse

* Take checkstyle plugin out of default build

* Use less for initial JVM opts (maybe forked compilers will need this)

* Try on a mac?

* Report free space, add MAVEN_OPTS

* No MAVEN_OPTS?

* Back to ubuntu

* Try some compiler args and max mem

* Try some MaxRamPercentage on surefire too

* Try 75.0 MaxRamPercentage

* 60?

* Update surefire version, even less Xmx

* Revert I18nBase style fix (get tests to pass, apply later)

* Now that memory is less of an issue, try checkstyle again

* Fix missing single quote

* Try 50% of 7G for Xmx
2024-10-07 11:01:08 -04:00
Grahame Grieve
cd7e579f5e
Merge pull request #1768 from hapifhir/2024-10-gg-validation-fixes
2024 10 gg validation fixes
2024-10-06 18:30:24 +08:00
Grahame Grieve
ba108321e3
Merge pull request #1755 from ahenket/master
Updated for 3 missing nl validator translations
2024-10-06 17:57:19 +08:00
Grahame Grieve
837aa319c0 do not use loadPackageFromCacheOnly from outside cache manager 2024-10-05 06:41:33 +08:00